Result of FASTA (omim) for
pF1KB6906
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6906, 223 aa
1>>>pF1KB6906 223 - 223 aa - 223 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8323+/-0.000369; mu= 10.6842+/- 0.023
mean_var=71.5704+/-13.984, 0's: 0 Z-trim(113.8): 61 B-trim: 41 in 2/52
Lambda= 0.151603
statistics sampled from 23199 (23260) to 23199 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.273), width: 16
Scan time: 4.630
The best scores are: opt bits E(85289)
NP_071425 (OMIM: 607443) epididymal sperm-binding ( 223) 1663 372.8 2.5e-103
XP_016882619 (OMIM: 607443) PREDICTED: epididymal ( 268) 1663 372.8 3e-103
NP_001289439 (OMIM: 120360,259600) 72 kDa type IV ( 584) 458 109.4 1.3e-23
NP_001289438 (OMIM: 120360,259600) 72 kDa type IV ( 584) 458 109.4 1.3e-23
NP_001289437 (OMIM: 120360,259600) 72 kDa type IV ( 584) 458 109.4 1.3e-23
NP_001121363 (OMIM: 120360,259600) 72 kDa type IV ( 610) 458 109.4 1.3e-23
NP_004521 (OMIM: 120360,259600) 72 kDa type IV col ( 660) 458 109.4 1.4e-23
NP_473375 (OMIM: 135600,601894,614101) fibronectin ( 657) 346 84.9 3.4e-16
NP_001121798 (OMIM: 612213) binder of sperm protei ( 132) 335 82.3 4.3e-16
XP_016881607 (OMIM: 612213) PREDICTED: binder of s ( 132) 335 82.3 4.3e-16
NP_997639 (OMIM: 135600,601894,614101) fibronectin (2176) 346 85.1 9.8e-16
NP_001293061 (OMIM: 135600,601894,614101) fibronec (2240) 346 85.1 1e-15
XP_005246473 (OMIM: 135600,601894,614101) PREDICTE (2246) 346 85.1 1e-15
NP_001293060 (OMIM: 135600,601894,614101) fibronec (2265) 346 85.1 1e-15
XP_005246471 (OMIM: 135600,601894,614101) PREDICTE (2266) 346 85.1 1e-15
NP_001293059 (OMIM: 135600,601894,614101) fibronec (2267) 346 85.1 1e-15
XP_005246469 (OMIM: 135600,601894,614101) PREDICTE (2271) 346 85.1 1e-15
XP_005246468 (OMIM: 135600,601894,614101) PREDICTE (2273) 346 85.1 1e-15
NP_997641 (OMIM: 135600,601894,614101) fibronectin (2296) 346 85.1 1e-15
XP_016859184 (OMIM: 135600,601894,614101) PREDICTE (2302) 346 85.1 1e-15
NP_997643 (OMIM: 135600,601894,614101) fibronectin (2330) 346 85.1 1e-15
XP_016859183 (OMIM: 135600,601894,614101) PREDICTE (2331) 346 85.1 1e-15
XP_005246467 (OMIM: 135600,601894,614101) PREDICTE (2337) 346 85.1 1e-15
NP_002017 (OMIM: 135600,601894,614101) fibronectin (2355) 346 85.1 1e-15
XP_016859182 (OMIM: 135600,601894,614101) PREDICTE (2356) 346 85.1 1e-15
XP_016859181 (OMIM: 135600,601894,614101) PREDICTE (2357) 346 85.1 1e-15
XP_005246466 (OMIM: 135600,601894,614101) PREDICTE (2361) 346 85.1 1e-15
XP_005246465 (OMIM: 135600,601894,614101) PREDICTE (2362) 346 85.1 1.1e-15
XP_005246464 (OMIM: 135600,601894,614101) PREDICTE (2363) 346 85.1 1.1e-15
XP_005246463 (OMIM: 135600,601894,614101) PREDICTE (2386) 346 85.1 1.1e-15
XP_005246462 (OMIM: 135600,601894,614101) PREDICTE (2387) 346 85.1 1.1e-15
XP_005246461 (OMIM: 135600,601894,614101) PREDICTE (2392) 346 85.1 1.1e-15
XP_005246460 (OMIM: 135600,601894,614101) PREDICTE (2393) 346 85.1 1.1e-15
XP_005246459 (OMIM: 135600,601894,614101) PREDICTE (2421) 346 85.1 1.1e-15
XP_005246458 (OMIM: 135600,601894,614101) PREDICTE (2427) 346 85.1 1.1e-15
NP_001293058 (OMIM: 135600,601894,614101) fibronec (2446) 346 85.2 1.1e-15
XP_005246456 (OMIM: 135600,601894,614101) PREDICTE (2452) 346 85.2 1.1e-15
XP_005246455 (OMIM: 135600,601894,614101) PREDICTE (2458) 346 85.2 1.1e-15
NP_997647 (OMIM: 135600,601894,614101) fibronectin (2477) 346 85.2 1.1e-15
XP_005246454 (OMIM: 135600,601894,614101) PREDICTE (2483) 346 85.2 1.1e-15
NP_001231913 (OMIM: 602329) protein sel-1 homolog ( 301) 201 53.1 6e-07
NP_000496 (OMIM: 234000,610618,610619) coagulation ( 615) 204 53.9 7.1e-07
XP_005268046 (OMIM: 602329) PREDICTED: protein sel ( 771) 201 53.2 1.4e-06
NP_005056 (OMIM: 602329) protein sel-1 homolog 1 i ( 794) 201 53.2 1.4e-06
NP_004985 (OMIM: 120361,613073) matrix metalloprot ( 707) 188 50.4 9.1e-06
NP_001519 (OMIM: 604552) hepatocyte growth factor ( 655) 183 49.3 1.8e-05
NP_001284368 (OMIM: 604552) hepatocyte growth fact ( 662) 183 49.3 1.8e-05
XP_016859090 (OMIM: 604939) PREDICTED: secretory p ( 795) 183 49.3 2.2e-05
NP_002429 (OMIM: 153618) macrophage mannose recept (1456) 184 49.6 3.2e-05
NP_001007268 (OMIM: 604939) secretory phospholipas (1324) 183 49.4 3.4e-05
>>NP_071425 (OMIM: 607443) epididymal sperm-binding prot (223 aa)
initn: 1663 init1: 1663 opt: 1663 Z-score: 1976.0 bits: 372.8 E(85289): 2.5e-103
Smith-Waterman score: 1663; 99.6% identity (100.0% similar) in 223 aa overlap (1-223:1-223)
10 20 30 40 50 60
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFTYKGSVYFTCTHIHSLSPWCATRAVYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFTYKGSVYFTCTHIHSLSPWCATRAVYN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTSVFDEKQQWKFCETNEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 GQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTSVFDEKQQWKFCETNEY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GGNSLRKPCIFPSIYRNNVVSDCMEDESNKLWCPTTENMDKDGKWSFCADTRISALVPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 GGNSLRKPCIFPSIYRNNVVSDCMEDESNKLWCPTTENMDKDGKWSFCADTRISALVPGF
130 140 150 160 170 180
190 200 210 220
pF1KB6 PCHFPFNYKNKNYFNCTNKGSKENLVWCATSYNYDQDHTWVYC
::::::::::::::::::.::::::::::::::::::::::::
NP_071 PCHFPFNYKNKNYFNCTNEGSKENLVWCATSYNYDQDHTWVYC
190 200 210 220
>>XP_016882619 (OMIM: 607443) PREDICTED: epididymal sper (268 aa)
initn: 1663 init1: 1663 opt: 1663 Z-score: 1974.7 bits: 372.8 E(85289): 3e-103
Smith-Waterman score: 1663; 99.6% identity (100.0% similar) in 223 aa overlap (1-223:46-268)
10 20 30
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECV
::::::::::::::::::::::::::::::
XP_016 KNSDTSIDRPALTLRYITYQLWSFEKRAAKMTRWSSYLLGWTTFLLYSYESSGGMHEECV
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB6 FPFTYKGSVYFTCTHIHSLSPWCATRAVYNGQWKYCQSEDYPRCIFPFIYRGKAYNSCIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FPFTYKGSVYFTCTHIHSLSPWCATRAVYNGQWKYCQSEDYPRCIFPFIYRGKAYNSCIS
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB6 QGSFLGSLWCSVTSVFDEKQQWKFCETNEYGGNSLRKPCIFPSIYRNNVVSDCMEDESNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGSFLGSLWCSVTSVFDEKQQWKFCETNEYGGNSLRKPCIFPSIYRNNVVSDCMEDESNK
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB6 LWCPTTENMDKDGKWSFCADTRISALVPGFPCHFPFNYKNKNYFNCTNKGSKENLVWCAT
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
XP_016 LWCPTTENMDKDGKWSFCADTRISALVPGFPCHFPFNYKNKNYFNCTNEGSKENLVWCAT
200 210 220 230 240 250
220
pF1KB6 SYNYDQDHTWVYC
:::::::::::::
XP_016 SYNYDQDHTWVYC
260
>>NP_001289439 (OMIM: 120360,259600) 72 kDa type IV coll (584 aa)
initn: 459 init1: 173 opt: 458 Z-score: 545.0 bits: 109.4 E(85289): 1.3e-23
Smith-Waterman score: 458; 33.2% identity (62.7% similar) in 217 aa overlap (17-223:106-314)
10 20 30 40
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFT-YKGSVYFTCTH
: .... :. . : : :. .: .
NP_001 SDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDE
80 90 100 110 120 130
50 60 70 80 90 100
pF1KB6 IHSLSPWCATRAVY-NGQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTS
. .:. ..:. : :.. .::. :::.. :: :::: . : : ::::.:
NP_001 LWTLGEGQVVRVKYGNADGEYCK--------FPFLFNGKEYNSCTDTGRSDGFLWCSTTY
140 150 160 170 180
110 120 130 140 150
pF1KB6 VFDEKQQWKFCETNE---YGGNSLRKPCIFPSIYRNNVVSDCM-EDESNKL-WCPTTENM
:.. .. :: . .:::. .:: :: .... ..: : ... :: :::..
NP_001 NFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDY
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB6 DKDGKWSFCADTRISAL---VPGFPCHFPFNYKNKNYFNCTNKGSKENLVWCATSYNYDQ
:.: :..:: .: .:.. : :: :::.. ...: .::. : ... .::::. :::.
NP_001 DRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDD
250 260 270 280 290 300
220
pF1KB6 DHTWVYC
:. : .:
NP_001 DRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQE
310 320 330 340 350 360
>>NP_001289438 (OMIM: 120360,259600) 72 kDa type IV coll (584 aa)
initn: 459 init1: 173 opt: 458 Z-score: 545.0 bits: 109.4 E(85289): 1.3e-23
Smith-Waterman score: 458; 33.2% identity (62.7% similar) in 217 aa overlap (17-223:106-314)
10 20 30 40
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFT-YKGSVYFTCTH
: .... :. . : : :. .: .
NP_001 SDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDE
80 90 100 110 120 130
50 60 70 80 90 100
pF1KB6 IHSLSPWCATRAVY-NGQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTS
. .:. ..:. : :.. .::. :::.. :: :::: . : : ::::.:
NP_001 LWTLGEGQVVRVKYGNADGEYCK--------FPFLFNGKEYNSCTDTGRSDGFLWCSTTY
140 150 160 170 180
110 120 130 140 150
pF1KB6 VFDEKQQWKFCETNE---YGGNSLRKPCIFPSIYRNNVVSDCM-EDESNKL-WCPTTENM
:.. .. :: . .:::. .:: :: .... ..: : ... :: :::..
NP_001 NFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDY
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB6 DKDGKWSFCADTRISAL---VPGFPCHFPFNYKNKNYFNCTNKGSKENLVWCATSYNYDQ
:.: :..:: .: .:.. : :: :::.. ...: .::. : ... .::::. :::.
NP_001 DRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDD
250 260 270 280 290 300
220
pF1KB6 DHTWVYC
:. : .:
NP_001 DRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQE
310 320 330 340 350 360
>>NP_001289437 (OMIM: 120360,259600) 72 kDa type IV coll (584 aa)
initn: 459 init1: 173 opt: 458 Z-score: 545.0 bits: 109.4 E(85289): 1.3e-23
Smith-Waterman score: 458; 33.2% identity (62.7% similar) in 217 aa overlap (17-223:106-314)
10 20 30 40
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFT-YKGSVYFTCTH
: .... :. . : : :. .: .
NP_001 SDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDE
80 90 100 110 120 130
50 60 70 80 90 100
pF1KB6 IHSLSPWCATRAVY-NGQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTS
. .:. ..:. : :.. .::. :::.. :: :::: . : : ::::.:
NP_001 LWTLGEGQVVRVKYGNADGEYCK--------FPFLFNGKEYNSCTDTGRSDGFLWCSTTY
140 150 160 170 180
110 120 130 140 150
pF1KB6 VFDEKQQWKFCETNE---YGGNSLRKPCIFPSIYRNNVVSDCM-EDESNKL-WCPTTENM
:.. .. :: . .:::. .:: :: .... ..: : ... :: :::..
NP_001 NFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDY
190 200 210 220 230 240
160 170 180 190 200 210
pF1KB6 DKDGKWSFCADTRISAL---VPGFPCHFPFNYKNKNYFNCTNKGSKENLVWCATSYNYDQ
:.: :..:: .: .:.. : :: :::.. ...: .::. : ... .::::. :::.
NP_001 DRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDD
250 260 270 280 290 300
220
pF1KB6 DHTWVYC
:. : .:
NP_001 DRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQE
310 320 330 340 350 360
>>NP_001121363 (OMIM: 120360,259600) 72 kDa type IV coll (610 aa)
initn: 459 init1: 173 opt: 458 Z-score: 544.7 bits: 109.4 E(85289): 1.3e-23
Smith-Waterman score: 458; 33.2% identity (62.7% similar) in 217 aa overlap (17-223:132-340)
10 20 30 40
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFT-YKGSVYFTCTH
: .... :. . : : :. .: .
NP_001 SDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDE
110 120 130 140 150 160
50 60 70 80 90 100
pF1KB6 IHSLSPWCATRAVY-NGQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTS
. .:. ..:. : :.. .::. :::.. :: :::: . : : ::::.:
NP_001 LWTLGEGQVVRVKYGNADGEYCK--------FPFLFNGKEYNSCTDTGRSDGFLWCSTTY
170 180 190 200 210
110 120 130 140 150
pF1KB6 VFDEKQQWKFCETNE---YGGNSLRKPCIFPSIYRNNVVSDCM-EDESNKL-WCPTTENM
:.. .. :: . .:::. .:: :: .... ..: : ... :: :::..
NP_001 NFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDY
220 230 240 250 260 270
160 170 180 190 200 210
pF1KB6 DKDGKWSFCADTRISAL---VPGFPCHFPFNYKNKNYFNCTNKGSKENLVWCATSYNYDQ
:.: :..:: .: .:.. : :: :::.. ...: .::. : ... .::::. :::.
NP_001 DRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDD
280 290 300 310 320 330
220
pF1KB6 DHTWVYC
:. : .:
NP_001 DRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQE
340 350 360 370 380 390
>>NP_004521 (OMIM: 120360,259600) 72 kDa type IV collage (660 aa)
initn: 459 init1: 173 opt: 458 Z-score: 544.1 bits: 109.4 E(85289): 1.4e-23
Smith-Waterman score: 458; 33.2% identity (62.7% similar) in 217 aa overlap (17-223:182-390)
10 20 30 40
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFT-YKGSVYFTCTH
: .... :. . : : :. .: .
NP_004 SDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDE
160 170 180 190 200 210
50 60 70 80 90 100
pF1KB6 IHSLSPWCATRAVY-NGQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTS
. .:. ..:. : :.. .::. :::.. :: :::: . : : ::::.:
NP_004 LWTLGEGQVVRVKYGNADGEYCK--------FPFLFNGKEYNSCTDTGRSDGFLWCSTTY
220 230 240 250 260
110 120 130 140 150
pF1KB6 VFDEKQQWKFCETNE---YGGNSLRKPCIFPSIYRNNVVSDCM-EDESNKL-WCPTTENM
:.. .. :: . .:::. .:: :: .... ..: : ... :: :::..
NP_004 NFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDY
270 280 290 300 310 320
160 170 180 190 200 210
pF1KB6 DKDGKWSFCADTRISAL---VPGFPCHFPFNYKNKNYFNCTNKGSKENLVWCATSYNYDQ
:.: :..:: .: .:.. : :: :::.. ...: .::. : ... .::::. :::.
NP_004 DRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDD
330 340 350 360 370 380
220
pF1KB6 DHTWVYC
:. : .:
NP_004 DRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQE
390 400 410 420 430 440
>>NP_473375 (OMIM: 135600,601894,614101) fibronectin iso (657 aa)
initn: 456 init1: 192 opt: 346 Z-score: 411.8 bits: 84.9 E(85289): 3.4e-16
Smith-Waterman score: 354; 29.9% identity (56.4% similar) in 234 aa overlap (5-223:238-461)
10 20 30
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFT
.:: .: : .: ... : .:. :
NP_473 WMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSYRIGDT----WSKKDNRGNLLQCIC--T
210 220 230 240 250 260
40 50 60 70 80
pF1KB6 YKGSVYFTC---THIHSLS----PWCATRA-VYNGQWKYCQSEDYPRCIFPFIYRGKAYN
.: . : : ... : :. .:: ::. : . : : .:. : .:.
NP_473 GNGRGEWKCERHTSVQTTSSGSGPFTDVRAAVYQPQ-PHPQPPPYGHCVTD---SGVVYS
270 280 290 300 310
90 100 110 120 130 140
pF1KB6 SCISQGSFLGSLWCSVTSVFDEKQQWKFCETNEYGGNSLRKPCIFPSIYRNNVVSDCMED
.. . :. : . . . . :. ::::: .::..: : . . .: .
NP_473 VGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPCVLPFTYNGRTFYSCTTE
320 330 340 350 360 370
150 160 170 180 190
pF1KB6 --ESNKLWCPTTENMDKDGKWSFCADTRISALVPGFP-----CHFPFNYKNKNYFNCTNK
....::: :: :...: :.:::.: . . . : ::::: :.:.:: .::..
NP_473 GRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALCHFPFLYNNHNYTDCTSE
380 390 400 410 420 430
200 210 220
pF1KB6 GSKENLVWCATSYNYDQDHTWVYC
: ..:. ::.:. ::: :. . .:
NP_473 GRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYRIGDQWDKQHDMGHMMRCT
440 450 460 470 480 490
>>NP_001121798 (OMIM: 612213) binder of sperm protein ho (132 aa)
initn: 335 init1: 335 opt: 335 Z-score: 409.8 bits: 82.3 E(85289): 4.3e-16
Smith-Waterman score: 335; 42.7% identity (70.8% similar) in 89 aa overlap (28-116:44-132)
10 20 30 40 50
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFTYKGSVYFTCTHIHSLSPWCATRA
:::::: ::...:. : . .. ::.
NP_001 NSSACIFPVILNELSSTVETITHFPEVTDGECVFPFHYKNGTYYDCIKSKARHKWCSLNK
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB6 VYNGQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTSVFDEKQQWKFCET
.:.: ::.:..::. :.::: :: : : ..: .:. :::.:. :.. . ::.::
NP_001 TYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYCE
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB6 NEYGGNSLRKPCIFPSIYRNNVVSDCMEDESNKLWCPTTENMDKDGKWSFCADTRISALV
>>XP_016881607 (OMIM: 612213) PREDICTED: binder of sperm (132 aa)
initn: 335 init1: 335 opt: 335 Z-score: 409.8 bits: 82.3 E(85289): 4.3e-16
Smith-Waterman score: 335; 42.7% identity (70.8% similar) in 89 aa overlap (28-116:44-132)
10 20 30 40 50
pF1KB6 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFTYKGSVYFTCTHIHSLSPWCATRA
:::::: ::...:. : . .. ::.
XP_016 NSSACIFPVILNELSSTVETITHFPEVTDGECVFPFHYKNGTYYDCIKSKARHKWCSLNK
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB6 VYNGQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTSVFDEKQQWKFCET
.:.: ::.:..::. :.::: :: : : ..: .:. :::.:. :.. . ::.::
XP_016 TYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYCE
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB6 NEYGGNSLRKPCIFPSIYRNNVVSDCMEDESNKLWCPTTENMDKDGKWSFCADTRISALV
223 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:15:54 2016 done: Sat Nov 5 14:15:55 2016
Total Scan time: 4.630 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]