Result of FASTA (omim) for
pF1KB6869
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6869, 179 aa
1>>>pF1KB6869 179 - 179 aa - 179 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9577+/-0.000332; mu= 14.5958+/- 0.021
mean_var=63.8830+/-12.597, 0's: 0 Z-trim(115.1): 246 B-trim: 1294 in 2/56
Lambda= 0.160466
statistics sampled from 25149 (25417) to 25149 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.298), width: 16
Scan time: 5.700
The best scores are: opt bits E(85289)
NP_002253 (OMIM: 602894) natural killer cells anti ( 179) 1242 295.7 2.6e-80
NP_001107868 (OMIM: 602894) natural killer cells a ( 179) 1242 295.7 2.6e-80
XP_016874780 (OMIM: 602894) PREDICTED: natural kil ( 179) 1238 294.8 4.9e-80
XP_016874776 (OMIM: 602894) PREDICTED: natural kil ( 219) 1197 285.4 4.1e-77
XP_016874779 (OMIM: 602894) PREDICTED: natural kil ( 185) 1186 282.8 2.1e-76
XP_006719130 (OMIM: 602894) PREDICTED: natural kil ( 185) 1186 282.8 2.1e-76
XP_016874774 (OMIM: 602894) PREDICTED: natural kil ( 220) 1185 282.6 2.8e-76
XP_011518952 (OMIM: 602894) PREDICTED: natural kil ( 220) 1185 282.6 2.8e-76
XP_016874775 (OMIM: 602894) PREDICTED: natural kil ( 220) 1185 282.6 2.8e-76
XP_011518953 (OMIM: 602894) PREDICTED: natural kil ( 186) 1183 282.1 3.4e-76
NP_031360 (OMIM: 602894) natural killer cells anti ( 148) 1033 247.3 8.1e-66
XP_016874778 (OMIM: 602894) PREDICTED: natural kil ( 188) 992 237.9 7.1e-63
XP_016874777 (OMIM: 602894) PREDICTED: natural kil ( 189) 980 235.1 4.9e-62
NP_002251 (OMIM: 602891) NKG2-C type II integral m ( 231) 313 80.7 1.7e-15
NP_002250 (OMIM: 161555) NKG2-A/NKG2-B type II int ( 233) 311 80.3 2.4e-15
NP_998823 (OMIM: 161555) NKG2-A/NKG2-B type II int ( 233) 311 80.3 2.4e-15
NP_031386 (OMIM: 611817) NKG2-D type II integral m ( 216) 308 79.6 3.7e-15
NP_002252 (OMIM: 602892) NKG2-E type II integral m ( 240) 302 78.2 1e-14
NP_031359 (OMIM: 602892) NKG2-E type II integral m ( 257) 302 78.2 1.1e-14
NP_001291377 (OMIM: 161555) NKG2-A/NKG2-B type II ( 228) 297 77.0 2.2e-14
XP_016874172 (OMIM: 604874) PREDICTED: killer cell ( 199) 278 72.6 4.2e-13
XP_016874174 (OMIM: 604874) PREDICTED: killer cell ( 199) 278 72.6 4.2e-13
XP_016874173 (OMIM: 604874) PREDICTED: killer cell ( 199) 278 72.6 4.2e-13
XP_016874171 (OMIM: 604874) PREDICTED: killer cell ( 199) 278 72.6 4.2e-13
NP_005801 (OMIM: 604874) killer cell lectin-like r ( 189) 276 72.1 5.6e-13
NP_001316028 (OMIM: 604874) killer cell lectin-lik ( 195) 276 72.1 5.7e-13
XP_016874885 (OMIM: 606783) PREDICTED: C-type lect ( 173) 265 69.6 3.1e-12
XP_011518987 (OMIM: 606783) PREDICTED: C-type lect ( 196) 265 69.6 3.4e-12
NP_001092901 (OMIM: 606783) C-type lectin domain f ( 196) 265 69.6 3.4e-12
XP_016874884 (OMIM: 606783) PREDICTED: C-type lect ( 229) 265 69.6 3.8e-12
NP_057593 (OMIM: 606783) C-type lectin domain fami ( 229) 265 69.6 3.8e-12
XP_005253439 (OMIM: 606783) PREDICTED: C-type lect ( 229) 265 69.6 3.8e-12
NP_001772 (OMIM: 107273) early activation antigen ( 199) 264 69.4 4e-12
XP_011518989 (OMIM: 606782) PREDICTED: C-type lect ( 307) 266 70.0 4.1e-12
NP_001284678 (OMIM: 606782) C-type lectin domain f ( 188) 261 68.7 6.2e-12
NP_001284679 (OMIM: 606782) C-type lectin domain f ( 192) 261 68.7 6.3e-12
NP_001284680 (OMIM: 606782) C-type lectin domain f ( 192) 261 68.7 6.3e-12
NP_997228 (OMIM: 612252) C-type lectin domain fami ( 241) 262 69.0 6.4e-12
NP_001284677 (OMIM: 606782) C-type lectin domain f ( 247) 261 68.7 7.7e-12
NP_057595 (OMIM: 606782) C-type lectin domain fami ( 280) 261 68.8 8.5e-12
XP_016867404 (OMIM: 604987) PREDICTED: C-type lect ( 168) 256 67.5 1.3e-11
NP_002534 (OMIM: 602601,608446) oxidized low-densi ( 273) 258 68.1 1.3e-11
NP_001138378 (OMIM: 605872) C-type lectin domain f ( 263) 253 66.9 2.9e-11
NP_998822 (OMIM: 161555) NKG2-A/NKG2-B type II int ( 215) 251 66.4 3.4e-11
NP_015567 (OMIM: 161555) NKG2-A/NKG2-B type II int ( 215) 251 66.4 3.4e-11
NP_001138379 (OMIM: 605872) C-type lectin domain f ( 332) 253 67.0 3.5e-11
XP_006722677 (OMIM: 605872) PREDICTED: C-type lect ( 343) 253 67.0 3.6e-11
NP_001138376 (OMIM: 605872) C-type lectin domain f ( 348) 253 67.0 3.6e-11
NP_001138381 (OMIM: 605872) C-type lectin domain f ( 353) 253 67.0 3.7e-11
XP_006722676 (OMIM: 605872) PREDICTED: C-type lect ( 371) 253 67.0 3.8e-11
>>NP_002253 (OMIM: 602894) natural killer cells antigen (179 aa)
initn: 1242 init1: 1242 opt: 1242 Z-score: 1562.9 bits: 295.7 E(85289): 2.6e-80
Smith-Waterman score: 1242; 100.0% identity (100.0% similar) in 179 aa overlap (1-179:1-179)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
130 140 150 160 170
>>NP_001107868 (OMIM: 602894) natural killer cells antig (179 aa)
initn: 1242 init1: 1242 opt: 1242 Z-score: 1562.9 bits: 295.7 E(85289): 2.6e-80
Smith-Waterman score: 1242; 100.0% identity (100.0% similar) in 179 aa overlap (1-179:1-179)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
130 140 150 160 170
>>XP_016874780 (OMIM: 602894) PREDICTED: natural killer (179 aa)
initn: 1238 init1: 1238 opt: 1238 Z-score: 1557.9 bits: 294.8 E(85289): 4.9e-80
Smith-Waterman score: 1238; 99.4% identity (100.0% similar) in 179 aa overlap (1-179:1-179)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_016 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
130 140 150 160 170
>>XP_016874776 (OMIM: 602894) PREDICTED: natural killer (219 aa)
initn: 1195 init1: 1195 opt: 1197 Z-score: 1505.4 bits: 285.4 E(85289): 4.1e-77
Smith-Waterman score: 1197; 98.3% identity (98.9% similar) in 176 aa overlap (1-176:1-176)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_016 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
::::::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_016 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIFLQGWRS
130 140 150 160 170 180
XP_016 LRKLTVMTEGKANTSLYAWQQKGDVLSKRKNTLLLNHQI
190 200 210
>>XP_016874779 (OMIM: 602894) PREDICTED: natural killer (185 aa)
initn: 1210 init1: 726 opt: 1186 Z-score: 1492.7 bits: 282.8 E(85289): 2.1e-76
Smith-Waterman score: 1186; 98.3% identity (98.9% similar) in 176 aa overlap (1-175:1-176)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_016 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDEL-DFMSSSQQFYWIGL
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
XP_016 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELQDFMSSSQQFYWIGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_016 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIYKVLLC
130 140 150 160 170 180
XP_016 CPGWS
>>XP_006719130 (OMIM: 602894) PREDICTED: natural killer (185 aa)
initn: 1210 init1: 726 opt: 1186 Z-score: 1492.7 bits: 282.8 E(85289): 2.1e-76
Smith-Waterman score: 1186; 98.3% identity (98.9% similar) in 176 aa overlap (1-175:1-176)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_006 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDEL-DFMSSSQQFYWIGL
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
XP_006 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELQDFMSSSQQFYWIGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_006 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIYKVLLC
130 140 150 160 170 180
XP_006 CPGWS
>>XP_016874774 (OMIM: 602894) PREDICTED: natural killer (220 aa)
initn: 726 init1: 726 opt: 1185 Z-score: 1490.3 bits: 282.6 E(85289): 2.8e-76
Smith-Waterman score: 1185; 97.7% identity (98.3% similar) in 177 aa overlap (1-176:1-177)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_016 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDEL-DFMSSSQQFYWIGL
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
XP_016 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELQDFMSSSQQFYWIGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_016 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIFLQGWR
130 140 150 160 170 180
XP_016 SLRKLTVMTEGKANTSLYAWQQKGDVLSKRKNTLLLNHQI
190 200 210 220
>>XP_011518952 (OMIM: 602894) PREDICTED: natural killer (220 aa)
initn: 726 init1: 726 opt: 1185 Z-score: 1490.3 bits: 282.6 E(85289): 2.8e-76
Smith-Waterman score: 1185; 97.7% identity (98.3% similar) in 177 aa overlap (1-176:1-177)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_011 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDEL-DFMSSSQQFYWIGL
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
XP_011 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELQDFMSSSQQFYWIGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_011 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIFLQGWR
130 140 150 160 170 180
XP_011 SLRKLTVMTEGKANTSLYAWQQKGDVLSKRKNTLLLNHQI
190 200 210 220
>>XP_016874775 (OMIM: 602894) PREDICTED: natural killer (220 aa)
initn: 726 init1: 726 opt: 1185 Z-score: 1490.3 bits: 282.6 E(85289): 2.8e-76
Smith-Waterman score: 1185; 97.7% identity (98.3% similar) in 177 aa overlap (1-176:1-177)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_016 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDEL-DFMSSSQQFYWIGL
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
XP_016 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELQDFMSSSQQFYWIGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :
XP_016 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIFLQGWR
130 140 150 160 170 180
XP_016 SLRKLTVMTEGKANTSLYAWQQKGDVLSKRKNTLLLNHQI
190 200 210 220
>>XP_011518953 (OMIM: 602894) PREDICTED: natural killer (186 aa)
initn: 740 init1: 726 opt: 1183 Z-score: 1488.9 bits: 282.1 E(85289): 3.4e-76
Smith-Waterman score: 1183; 98.9% identity (99.4% similar) in 174 aa overlap (1-173:1-174)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_011 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDEL-DFMSSSQQFYWIGL
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
XP_011 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELQDFMSSSQQFYWIGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYIYYLIWG
130 140 150 160 170 180
XP_011 KPVIMS
179 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:08:27 2016 done: Sat Nov 5 04:08:28 2016
Total Scan time: 5.700 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]