Result of FASTA (ccds) for
pF1KB6869
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6869, 179 aa
1>>>pF1KB6869 179 - 179 aa - 179 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9994+/-0.000748; mu= 14.3569+/- 0.045
mean_var=67.0668+/-13.070, 0's: 0 Z-trim(108.6): 103 B-trim: 62 in 1/52
Lambda= 0.156610
statistics sampled from 10223 (10330) to 10223 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.317), width: 16
Scan time: 1.920
The best scores are: opt bits E(32554)
CCDS8621.1 KLRD1 gene_id:3824|Hs108|chr12 ( 179) 1238 288.1 2e-78
CCDS8622.1 KLRD1 gene_id:3824|Hs108|chr12 ( 148) 1033 241.7 1.5e-64
CCDS31745.1 KLRC2 gene_id:3822|Hs108|chr12 ( 231) 313 79.2 2e-15
CCDS8625.1 KLRC1 gene_id:3821|Hs108|chr12 ( 233) 311 78.7 2.8e-15
CCDS8623.1 KLRK1 gene_id:22914|Hs108|chr12 ( 216) 308 78.0 4.2e-15
CCDS41755.1 KLRC3 gene_id:3823|Hs108|chr12 ( 240) 302 76.7 1.2e-14
CCDS31744.1 KLRC3 gene_id:3823|Hs108|chr12 ( 257) 302 76.7 1.2e-14
CCDS76531.1 KLRC1 gene_id:3821|Hs108|chr12 ( 228) 297 75.5 2.4e-14
CCDS44830.1 CLEC12B gene_id:387837|Hs108|chr12 ( 276) 286 73.1 1.6e-13
CCDS8599.1 KLRG1 gene_id:10219|Hs108|chr12 ( 189) 276 70.7 5.6e-13
CCDS41751.1 CLEC1B gene_id:51266|Hs108|chr12 ( 196) 265 68.3 3.2e-12
CCDS41752.1 CLEC1B gene_id:51266|Hs108|chr12 ( 229) 265 68.3 3.7e-12
CCDS8604.1 CD69 gene_id:969|Hs108|chr12 ( 199) 264 68.0 3.8e-12
CCDS76528.1 CLEC1A gene_id:51267|Hs108|chr12 ( 188) 261 67.3 5.9e-12
CCDS8611.1 CLEC9A gene_id:283420|Hs108|chr12 ( 241) 262 67.6 6.1e-12
CCDS73443.1 CLEC1A gene_id:51267|Hs108|chr12 ( 247) 261 67.4 7.3e-12
CCDS8612.1 CLEC1A gene_id:51267|Hs108|chr12 ( 280) 261 67.5 8e-12
CCDS8618.1 OLR1 gene_id:4973|Hs108|chr12 ( 273) 258 66.8 1.3e-11
CCDS59347.1 CLEC4M gene_id:10332|Hs108|chr19 ( 263) 253 65.6 2.7e-11
CCDS8626.1 KLRC1 gene_id:3821|Hs108|chr12 ( 215) 251 65.1 3.1e-11
CCDS12187.1 CLEC4M gene_id:10332|Hs108|chr19 ( 399) 253 65.8 3.7e-11
CCDS56087.1 CLEC17A gene_id:388512|Hs108|chr19 ( 378) 251 65.3 4.9e-11
CCDS8605.1 CLEC2B gene_id:9976|Hs108|chr12 ( 149) 246 63.9 5.1e-11
CCDS8610.1 CLEC12B gene_id:387837|Hs108|chr12 ( 232) 248 64.5 5.3e-11
>>CCDS8621.1 KLRD1 gene_id:3824|Hs108|chr12 (179 aa)
initn: 1238 init1: 1238 opt: 1238 Z-score: 1521.5 bits: 288.1 E(32554): 2e-78
Smith-Waterman score: 1238; 99.4% identity (100.0% similar) in 179 aa overlap (1-179:1-179)
10 20 30 40 50 60
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
CCDS86 MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 CQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLS
70 80 90 100 110 120
130 140 150 160 170
pF1KB6 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 YSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
130 140 150 160 170
>>CCDS8622.1 KLRD1 gene_id:3824|Hs108|chr12 (148 aa)
initn: 1033 init1: 1033 opt: 1033 Z-score: 1272.3 bits: 241.7 E(32554): 1.5e-64
Smith-Waterman score: 1033; 99.3% identity (100.0% similar) in 146 aa overlap (34-179:3-148)
10 20 30 40 50 60
pF1KB6 FKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCSCQE
.:::::::::::::::::::::::::::::
CCDS86 MAAFTKLSIEPAFTPGPNIELQKDSDCCSCQE
10 20 30
70 80 90 100 110 120
pF1KB6 KWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 KWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSE
40 50 60 70 80 90
130 140 150 160 170
pF1KB6 EHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS86 EHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCEDKNRYICKQQLI
100 110 120 130 140
>>CCDS31745.1 KLRC2 gene_id:3822|Hs108|chr12 (231 aa)
initn: 311 init1: 261 opt: 313 Z-score: 390.4 bits: 79.2 E(32554): 2e-15
Smith-Waterman score: 313; 33.1% identity (60.4% similar) in 169 aa overlap (10-178:70-231)
10 20 30
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLS
.: . .:::::. :::: .: . .
CCDS31 QVELNLQNPSLNHQGIDKIYDCQGLLPPPEKLTAEVLGIICIVLMAT--VLKTIVLIPFL
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 IEPAFTPGPNIELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQL
. :.: : . :: : : :.:. : .::.:..:..::.:: :.:..::::..
CCDS31 EQNNFSP--NTRTQKARHCGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSI
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 QNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNG
.: .:. :..: :::. . : :. :: :... . : .. :: . . :
CCDS31 DNEEEMKFLASILPSSWIGVFRNSSHHPWVTINGLAFKHKIKDSDNA--ELNCAVLQVN-
160 170 180 190 200 210
160 170
pF1KB6 NALDESCEDKNRYICKQQLI
. .: .. : ::..:
CCDS31 RLKSAQCGSSMIYHCKHKL
220 230
>>CCDS8625.1 KLRC1 gene_id:3821|Hs108|chr12 (233 aa)
initn: 305 init1: 246 opt: 311 Z-score: 387.9 bits: 78.7 E(32554): 2.8e-15
Smith-Waterman score: 311; 33.1% identity (60.9% similar) in 169 aa overlap (10-178:70-233)
10 20 30
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLS
.:: : :::::: :::.. .. . .
CCDS86 YAELNLQKASQDFQGNDKTYHCKDLPSAPEKLIVGILGIICLILMASVVTIV--VIPSTL
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 IEPAFTPGPNIELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQL
:. . . : . :: : : :.:. : .::.:..:..::.:: :.:..::::..
CCDS86 IQRHNNSSLNTRTQKARHCGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSI
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 QNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNG
.: .:. :.: . :::. . : :. :: :... . : .. :: . . :
CCDS86 DNEEEMKFLSIISPSSWIGVFRNSSHHPWVTMNGLAFKHEIKDSDNA--ELNCAVLQVN-
160 170 180 190 200 210
160 170
pF1KB6 NALDESCEDKNRYICKQQLI
. .: .. : ::..:
CCDS86 RLKSAQCGSSIIYHCKHKL
220 230
>>CCDS8623.1 KLRK1 gene_id:22914|Hs108|chr12 (216 aa)
initn: 221 init1: 200 opt: 308 Z-score: 384.7 bits: 78.0 E(32554): 4.2e-15
Smith-Waterman score: 308; 28.8% identity (62.0% similar) in 163 aa overlap (20-179:56-216)
10 20 30 40
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGI---LLKNSFTKLSIEPAFTP
: . ...:: .. . .. . .. :.
CCDS86 KKSDFSTRWQKQRCPVVKSKCRENASPFFFCCFIAVAMGIRFIIMVTIWSAVFLNSLFNQ
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB6 GPNIELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELD
.: : .: : : ..:. :. ::: . .:.:.: ::. : ::..:::.. . .. :
CCDS86 EVQIPLT-ESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSKEDQD
90 100 110 120 130 140
110 120 130 140 150 160
pF1KB6 FMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESC
... ....:.:: . . .: ::.:: :: :. .: .. .: : . .. :.:
CCDS86 LLKLVKSYHWMGLVHIPTNGSWQWEDGSILSPNLLTIIE-MQKGDCALYASSFKGYIENC
150 160 170 180 190 200
170
pF1KB6 EDKNRYICKQQLI
: ::: :. .
CCDS86 STPNTYICMQRTV
210
>>CCDS41755.1 KLRC3 gene_id:3823|Hs108|chr12 (240 aa)
initn: 310 init1: 179 opt: 302 Z-score: 376.7 bits: 76.7 E(32554): 1.2e-14
Smith-Waterman score: 302; 33.5% identity (61.4% similar) in 158 aa overlap (10-166:70-220)
10 20 30
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLS
.: . .:::::. ::::. :: ... .
CCDS41 QVELNLQNASLNHQGIDKIYDCQGLLPPPEKLTAEVLGIICIVLMATV---LK-TIVLIP
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 IEPAFTPGPNIELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSS-LLQ
. . .:: . :: : : :.:. : .::.:..:..::.:: . :::..:: ::
CCDS41 FLEQNNSSPNARTQKARHCGHCPEEWITYSNSCYYIGKERRTWEESLQACASKNSSSLLC
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 LQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPN
..: .:. :..: :::. . : :. :: :... . : .:: .
CCDS41 IDNEEEMKFLASILPSSWIGVFRNSSHHPWVTINGLAFKHEIKDS--DHAERNCAMLHVR
160 170 180 190 200 210
160 170
pF1KB6 GNALDESCEDKNRYICKQQLI
: ....:
CCDS41 G-LISDQCGSSRIIRRGFIMLTRLVLNS
220 230 240
>>CCDS31744.1 KLRC3 gene_id:3823|Hs108|chr12 (257 aa)
initn: 326 init1: 179 opt: 302 Z-score: 376.3 bits: 76.7 E(32554): 1.2e-14
Smith-Waterman score: 302; 33.5% identity (61.4% similar) in 158 aa overlap (10-166:70-220)
10 20 30
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLS
.: . .:::::. ::::. :: ... .
CCDS31 QVELNLQNASLNHQGIDKIYDCQGLLPPPEKLTAEVLGIICIVLMATV---LK-TIVLIP
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 IEPAFTPGPNIELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSS-LLQ
. . .:: . :: : : :.:. : .::.:..:..::.:: . :::..:: ::
CCDS31 FLEQNNSSPNARTQKARHCGHCPEEWITYSNSCYYIGKERRTWEESLQACASKNSSSLLC
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 LQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPN
..: .:. :..: :::. . : :. :: :... . : .:: .
CCDS31 IDNEEEMKFLASILPSSWIGVFRNSSHHPWVTINGLAFKHEIKDS--DHAERNCAMLHVR
160 170 180 190 200 210
160 170
pF1KB6 GNALDESCEDKNRYICKQQLI
: ....:
CCDS31 G-LISDQCGSSRIIVSISFRIKALELAVHQIKFYICSNRNDIMIA
220 230 240 250
>>CCDS76531.1 KLRC1 gene_id:3821|Hs108|chr12 (228 aa)
initn: 305 init1: 246 opt: 297 Z-score: 370.9 bits: 75.5 E(32554): 2.4e-14
Smith-Waterman score: 297; 36.4% identity (64.3% similar) in 129 aa overlap (10-138:70-196)
10 20 30
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLS
.:: : :::::: :::.. .. . .
CCDS76 YAELNLQKASQDFQGNDKTYHCKDLPSAPEKLIVGILGIICLILMASVVTIV--VIPSTL
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 IEPAFTPGPNIELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQL
:. . . : . :: : : :.:. : .::.:..:..::.:: :.:..::::..
CCDS76 IQRHNNSSLNTRTQKARHCGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSI
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 QNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNG
.: .:. :.: . :::. . : :. :: :...
CCDS76 DNEEEMKFLSIISPSSWIGVFRNSSHHPWVTMNGLAFKHEIKDSDNAELNCAVLQVNRLK
160 170 180 190 200 210
160 170
pF1KB6 NALDESCEDKNRYICKQQLI
CCDS76 SAQCGSSIIYH
220
>>CCDS44830.1 CLEC12B gene_id:387837|Hs108|chr12 (276 aa)
initn: 261 init1: 117 opt: 286 Z-score: 356.3 bits: 73.1 E(32554): 1.6e-13
Smith-Waterman score: 286; 33.8% identity (64.6% similar) in 130 aa overlap (55-176:137-265)
30 40 50 60 70 80
pF1KB6 ATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCSCQEKWVGYRCNCY-FISSEQKTWN
: : : . : :. .:: : ..:.:::
CCDS44 EFLKSQISSVLKRQEQMAIKLCQELIIHTSDHRCNPCPKMWQWYQNSCYYFTTNEEKTWA
110 120 130 140 150 160
90 100 110 120 130
pF1KB6 ESRHLCASQKSSLLQLQNTDELDFMSSSQ----QFYWIGLSYSEEHTAWLWENGSALSQY
.::. : ...:.:..... .: ::. :. .:.:.:::.. .:.::.::. :
CCDS44 NSRKDCIDKNSTLVKIDSLEEKDFLMSQPLLMFSFFWLGLSWDSSGRSWFWEDGSVPSPS
170 180 190 200 210 220
140 150 160 170
pF1KB6 LFPS--FETFN-TKNCIAYNPNGNALDESCEDKNRYICKQQLI
:: . .. .: .:.: :: .:: : . .::..
CCDS44 LFSTKELDQINGSKGC-AYFQKGNIYISRCSAEIFWICEKTAAPVKTEDLD
230 240 250 260 270
>>CCDS8599.1 KLRG1 gene_id:10219|Hs108|chr12 (189 aa)
initn: 256 init1: 144 opt: 276 Z-score: 346.4 bits: 70.7 E(32554): 5.6e-13
Smith-Waterman score: 276; 32.1% identity (61.0% similar) in 159 aa overlap (20-176:37-186)
10 20 30 40
pF1KB6 MAVFKTTLWRLISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPN
:: .: ::.: .. : . . : :
CCDS85 YSMLELPTATQAQNDYGPQQKSSSSRPSCSCLVAIA-LGLLTAVLLSVLLYQWILCQGSN
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 IELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMS
..: :: ..:. : .::..: :.: :: : ..: .. : :: . ...:.....
CCDS85 YSTC--ASCPSCPDRWMKYGNHCYYFSVEEKDWNSSLEFCLARDSHLLVITDNQEMSLLQ
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 S--SQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTKNCIAYNPNGNALDESCE
:. : :::: .....: ::.:: :. . : ..: ...: : : :: :::
CCDS85 VFLSEAFCWIGL---RNNSGWRWEDGSPLN-FSRISSNSF-VQTCGAINKNG-LQASSCE
130 140 150 160 170
170
pF1KB6 DKNRYICKQQLI
...::.
CCDS85 VPLHWVCKKVRL
180
179 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:08:27 2016 done: Sat Nov 5 04:08:27 2016
Total Scan time: 1.920 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]