Result of FASTA (omim) for
pF1KB6790
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6790, 155 aa
1>>>pF1KB6790 155 - 155 aa - 155 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1730+/-0.00031; mu= 12.1902+/- 0.019
mean_var=65.2422+/-13.401, 0's: 0 Z-trim(116.5): 80 B-trim: 0 in 0/52
Lambda= 0.158785
statistics sampled from 27714 (27802) to 27714 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.326), width: 16
Scan time: 4.760
The best scores are: opt bits E(85289)
NP_001244134 (OMIM: 131220) fibroblast growth fact ( 155) 1047 248.1 4.3e-66
NP_001244139 (OMIM: 131220) fibroblast growth fact ( 155) 1047 248.1 4.3e-66
NP_001138364 (OMIM: 131220) fibroblast growth fact ( 155) 1047 248.1 4.3e-66
NP_001244138 (OMIM: 131220) fibroblast growth fact ( 155) 1047 248.1 4.3e-66
NP_001138407 (OMIM: 131220) fibroblast growth fact ( 155) 1047 248.1 4.3e-66
NP_000791 (OMIM: 131220) fibroblast growth factor ( 155) 1047 248.1 4.3e-66
NP_001244137 (OMIM: 131220) fibroblast growth fact ( 155) 1047 248.1 4.3e-66
NP_001244136 (OMIM: 131220) fibroblast growth fact ( 155) 1047 248.1 4.3e-66
NP_001138406 (OMIM: 131220) fibroblast growth fact ( 155) 1047 248.1 4.3e-66
XP_011535909 (OMIM: 131220) PREDICTED: fibroblast ( 154) 1028 243.7 8.7e-65
NP_001244140 (OMIM: 131220) fibroblast growth fact ( 154) 1028 243.7 8.7e-65
NP_001244135 (OMIM: 131220) fibroblast growth fact ( 154) 1028 243.7 8.7e-65
XP_005268447 (OMIM: 131220) PREDICTED: fibroblast ( 154) 1028 243.7 8.7e-65
NP_001244141 (OMIM: 131220) fibroblast growth fact ( 154) 1028 243.7 8.7e-65
NP_001997 (OMIM: 134920) fibroblast growth factor ( 288) 531 130.0 2.7e-30
NP_149128 (OMIM: 131220) fibroblast growth factor ( 59) 386 96.4 7.4e-21
NP_149127 (OMIM: 131220) fibroblast growth factor ( 60) 386 96.4 7.5e-21
NP_002001 (OMIM: 600921,612961) fibroblast growth ( 208) 329 83.7 1.8e-16
NP_062825 (OMIM: 605558,615721) fibroblast growth ( 211) 328 83.5 2.1e-16
NP_003859 (OMIM: 300827,309630) fibroblast growth ( 207) 327 83.2 2.4e-16
NP_001308865 (OMIM: 601515,609307) fibroblast grow ( 184) 280 72.4 3.9e-13
NP_001308861 (OMIM: 601515,609307) fibroblast grow ( 184) 280 72.4 3.9e-13
NP_001308873 (OMIM: 601515,609307) fibroblast grow ( 184) 280 72.4 3.9e-13
NP_001308870 (OMIM: 601515,609307) fibroblast grow ( 185) 280 72.4 3.9e-13
NP_001308867 (OMIM: 601515,609307) fibroblast grow ( 187) 280 72.4 3.9e-13
NP_001308869 (OMIM: 601515,609307) fibroblast grow ( 187) 280 72.4 3.9e-13
NP_001308862 (OMIM: 601515,609307) fibroblast grow ( 187) 280 72.4 3.9e-13
NP_001308876 (OMIM: 601515,609307) fibroblast grow ( 200) 280 72.4 4.1e-13
NP_001308877 (OMIM: 601515,609307) fibroblast grow ( 213) 280 72.5 4.3e-13
NP_001308874 (OMIM: 601515,609307) fibroblast grow ( 213) 280 72.5 4.3e-13
NP_004106 (OMIM: 601515,609307) fibroblast growth ( 247) 280 72.5 4.9e-13
NP_787125 (OMIM: 601515,609307) fibroblast growth ( 252) 280 72.5 5e-13
NP_002000 (OMIM: 148180) fibroblast growth factor ( 194) 275 71.3 8.9e-13
NP_004456 (OMIM: 149730,180920,602115) fibroblast ( 208) 270 70.2 2.1e-12
XP_005248321 (OMIM: 149730,180920,602115) PREDICTE ( 208) 270 70.2 2.1e-12
NP_065688 (OMIM: 605831) fibroblast growth factor ( 170) 265 69.0 3.9e-12
NP_004455 (OMIM: 165190,190330) fibroblast growth ( 268) 267 69.5 4.1e-12
NP_378668 (OMIM: 300070) fibroblast growth factor ( 192) 265 69.0 4.3e-12
XP_006713601 (OMIM: 601513,617166) PREDICTED: fibr ( 178) 263 68.5 5.6e-12
NP_004104 (OMIM: 601513,617166) fibroblast growth ( 181) 263 68.5 5.7e-12
XP_005247284 (OMIM: 601513,617166) PREDICTED: fibr ( 207) 263 68.6 6.3e-12
NP_001132970 (OMIM: 300070) fibroblast growth fact ( 199) 262 68.3 7.2e-12
NP_066360 (OMIM: 601513,617166) fibroblast growth ( 243) 263 68.6 7.2e-12
NP_001132974 (OMIM: 300070) fibroblast growth fact ( 226) 260 67.9 1.1e-11
NP_001132973 (OMIM: 300070) fibroblast growth fact ( 226) 260 67.9 1.1e-11
NP_004105 (OMIM: 300070) fibroblast growth factor ( 245) 260 67.9 1.2e-11
NP_001132972 (OMIM: 300070) fibroblast growth fact ( 255) 260 67.9 1.2e-11
XP_005262456 (OMIM: 300070) PREDICTED: fibroblast ( 255) 260 67.9 1.2e-11
XP_011533298 (OMIM: 600921,612961) PREDICTED: fibr ( 158) 252 66.0 2.9e-11
NP_001290389 (OMIM: 601514) fibroblast growth fact ( 166) 251 65.7 3.5e-11
>>NP_001244134 (OMIM: 131220) fibroblast growth factor 1 (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1307.6 bits: 248.1 E(85289): 4.3e-66
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
NP_001 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>NP_001244139 (OMIM: 131220) fibroblast growth factor 1 (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1307.6 bits: 248.1 E(85289): 4.3e-66
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
NP_001 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>NP_001138364 (OMIM: 131220) fibroblast growth factor 1 (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1307.6 bits: 248.1 E(85289): 4.3e-66
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
NP_001 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>NP_001244138 (OMIM: 131220) fibroblast growth factor 1 (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1307.6 bits: 248.1 E(85289): 4.3e-66
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
NP_001 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>NP_001138407 (OMIM: 131220) fibroblast growth factor 1 (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1307.6 bits: 248.1 E(85289): 4.3e-66
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
NP_001 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>NP_000791 (OMIM: 131220) fibroblast growth factor 1 is (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1307.6 bits: 248.1 E(85289): 4.3e-66
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
NP_000 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>NP_001244137 (OMIM: 131220) fibroblast growth factor 1 (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1307.6 bits: 248.1 E(85289): 4.3e-66
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
NP_001 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>NP_001244136 (OMIM: 131220) fibroblast growth factor 1 (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1307.6 bits: 248.1 E(85289): 4.3e-66
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
NP_001 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>NP_001138406 (OMIM: 131220) fibroblast growth factor 1 (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1307.6 bits: 248.1 E(85289): 4.3e-66
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
NP_001 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>XP_011535909 (OMIM: 131220) PREDICTED: fibroblast grow (154 aa)
initn: 614 init1: 602 opt: 1028 Z-score: 1284.1 bits: 243.7 E(85289): 8.7e-65
Smith-Waterman score: 1028; 99.4% identity (99.4% similar) in 155 aa overlap (1-155:1-154)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
XP_011 LSAESVGEVYIKSTETGQYLAMDTDGLLYGS-TPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
XP_011 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
120 130 140 150
155 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:12:54 2016 done: Fri Nov 4 15:12:55 2016
Total Scan time: 4.760 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]