Result of FASTA (ccds) for
pF1KB6790
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6790, 155 aa
1>>>pF1KB6790 155 - 155 aa - 155 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1925+/-0.000667; mu= 11.8853+/- 0.040
mean_var=60.6756+/-12.271, 0's: 0 Z-trim(109.5): 36 B-trim: 0 in 0/51
Lambda= 0.164652
statistics sampled from 10895 (10931) to 10895 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.336), width: 16
Scan time: 1.830
The best scores are: opt bits E(32554)
CCDS4275.1 FGF1 gene_id:2246|Hs108|chr5 ( 155) 1047 256.6 4.4e-69
CCDS34059.1 FGF2 gene_id:2247|Hs108|chr4 ( 288) 531 134.2 5.9e-32
CCDS4276.1 FGF1 gene_id:2246|Hs108|chr5 ( 60) 386 99.4 3.6e-22
CCDS9298.1 FGF9 gene_id:2254|Hs108|chr13 ( 208) 329 86.1 1.2e-17
CCDS5998.1 FGF20 gene_id:26281|Hs108|chr8 ( 211) 328 85.9 1.5e-17
CCDS75996.1 FGF16 gene_id:8823|Hs108|chrX ( 207) 327 85.7 1.7e-17
CCDS9501.1 FGF14 gene_id:2259|Hs108|chr13 ( 247) 280 74.5 4.6e-14
CCDS9500.1 FGF14 gene_id:2259|Hs108|chr13 ( 252) 280 74.5 4.7e-14
CCDS10131.1 FGF7 gene_id:2252|Hs108|chr15 ( 194) 275 73.3 8.5e-14
CCDS3950.1 FGF10 gene_id:2255|Hs108|chr5 ( 208) 270 72.1 2.1e-13
CCDS12037.1 FGF22 gene_id:27006|Hs108|chr19 ( 170) 265 70.9 3.9e-13
CCDS34021.1 FGF5 gene_id:2250|Hs108|chr4 ( 268) 267 71.5 4.2e-13
CCDS14664.1 FGF13 gene_id:2258|Hs108|chrX ( 192) 265 70.9 4.4e-13
CCDS46983.1 FGF12 gene_id:2257|Hs108|chr3 ( 181) 263 70.4 5.8e-13
CCDS55512.1 FGF13 gene_id:2258|Hs108|chrX ( 199) 262 70.2 7.4e-13
CCDS3301.1 FGF12 gene_id:2257|Hs108|chr3 ( 243) 263 70.5 7.4e-13
CCDS55511.1 FGF13 gene_id:2258|Hs108|chrX ( 226) 260 69.8 1.1e-12
CCDS14665.1 FGF13 gene_id:2258|Hs108|chrX ( 245) 260 69.8 1.2e-12
CCDS55513.1 FGF13 gene_id:2258|Hs108|chrX ( 255) 260 69.8 1.3e-12
CCDS11105.1 FGF11 gene_id:2256|Hs108|chr17 ( 225) 251 67.6 5e-12
CCDS8194.1 FGF4 gene_id:2249|Hs108|chr11 ( 206) 245 66.2 1.2e-11
CCDS8527.1 FGF6 gene_id:2251|Hs108|chr12 ( 208) 235 63.8 6.5e-11
>>CCDS4275.1 FGF1 gene_id:2246|Hs108|chr5 (155 aa)
initn: 1047 init1: 1047 opt: 1047 Z-score: 1353.8 bits: 256.6 E(32554): 4.4e-69
Smith-Waterman score: 1047; 100.0% identity (100.0% similar) in 155 aa overlap (1-155:1-155)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
70 80 90 100 110 120
130 140 150
pF1KB6 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:::::::::::::::::::::::::::::::::::
CCDS42 NWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
130 140 150
>>CCDS34059.1 FGF2 gene_id:2247|Hs108|chr4 (288 aa)
initn: 512 init1: 394 opt: 531 Z-score: 687.2 bits: 134.2 E(32554): 5.9e-32
Smith-Waterman score: 531; 54.1% identity (77.1% similar) in 157 aa overlap (1-154:134-288)
10 20
pF1KB6 MAEGEITTFTALTEKFN---LPPGNYKKPK
:: : :::. :: : . .:::..: ::
CCDS34 RVGGRGRGRGTAAPRAAPAARGSRPGPAGTMAAGSITTLPALPEDGGSGAFPPGHFKDPK
110 120 130 140 150 160
30 40 50 60 70 80
pF1KB6 LLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTDGL
:::.::: :::: ::: :::.:..:: ::.:::.:: : : ::.. ...:::: ::
CCDS34 RLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVCANRYLAMKEDGR
170 180 190 200 210 220
90 100 110 120 130 140
pF1KB6 LYGSQTPNEECLFLERLEENHYNTYISKKHAEKNWFVGLKKNGSCKRGPRTHYGQKAILF
: .:. ..::.:.:::: :.:::: :.:.. .:.:.::..:. : : .: :::::::
CCDS34 LLASKCVTDECFFFERLESNNYNTYRSRKYT--SWYVALKRTGQYKLGSKTGPGQKAILF
230 240 250 260 270 280
150
pF1KB6 LPLPVSSD
::. ..:
CCDS34 LPMSAKS
>>CCDS4276.1 FGF1 gene_id:2246|Hs108|chr5 (60 aa)
initn: 386 init1: 386 opt: 386 Z-score: 511.5 bits: 99.4 E(32554): 3.6e-22
Smith-Waterman score: 386; 100.0% identity (100.0% similar) in 56 aa overlap (1-56:1-56)
10 20 30 40 50 60
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHTDTK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEK
>>CCDS9298.1 FGF9 gene_id:2254|Hs108|chr13 (208 aa)
initn: 261 init1: 218 opt: 329 Z-score: 430.0 bits: 86.1 E(32554): 1.2e-17
Smith-Waterman score: 329; 42.1% identity (72.2% similar) in 133 aa overlap (27-155:64-195)
10 20 30 40 50
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQH
. ::: .: : :.:.:.::..::: ..
CCDS92 SDHLGQSEAGGLPRGPAVTDLDHLKGILRRRQLYCRTGFH-LEIFPNGTIQGTRKDHSRF
40 50 60 70 80 90
60 70 80 90 100 110
pF1KB6 IQLQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISK-
:.. . .:: : :.....: ::.:. : ::::. ..::.: :..::: :::: :.
CCDS92 GILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNL
100 110 120 130 140 150
120 130 140 150
pF1KB6 -KHAE--KNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
::.. . ..:.:.:.:. ..: ::. :: ::: ::. :
CCDS92 YKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTHFLPRPVDPDKVPELYKDILSQS
160 170 180 190 200
>>CCDS5998.1 FGF20 gene_id:26281|Hs108|chr8 (211 aa)
initn: 321 init1: 224 opt: 328 Z-score: 428.7 bits: 85.9 E(32554): 1.5e-17
Smith-Waterman score: 328; 42.9% identity (70.7% similar) in 133 aa overlap (27-155:67-198)
10 20 30 40 50
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQH
. ::: .: : :.:::::.:.:::. .
CCDS59 LGERRSAAERSARGGPGAAQLAHLHGILRRRQLYCRTGFH-LQILPDGSVQGTRQDHSLF
40 50 60 70 80 90
60 70 80 90 100 110
pF1KB6 IQLQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISK-
:.. . .:: : :.....: ::.:. : ::::. . ::.: :..::: :::: :.
CCDS59 GILEFISVAVGLVSIRGVDSGLYLGMNDKGELYGSEKLTSECIFREQFEENWYNTYSSNI
100 110 120 130 140 150
120 130 140 150
pF1KB6 -KHAE--KNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
::.. . .::.:.:.:. . : :.. :: ::: ::. .
CCDS59 YKHGDTGRRYFVALNKDGTPRDGARSKRHQKFTHFLPRPVDPERVPELYKDLLMYT
160 170 180 190 200 210
>>CCDS75996.1 FGF16 gene_id:8823|Hs108|chrX (207 aa)
initn: 217 init1: 217 opt: 327 Z-score: 427.5 bits: 85.7 E(32554): 1.7e-17
Smith-Waterman score: 327; 43.8% identity (71.5% similar) in 130 aa overlap (27-152:63-191)
10 20 30 40 50
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQH
. ::: .: : :.:.:.::: ::: ..
CCDS75 FLNERLGQIEGKLQRGSPTDFAHLKGILRRRQLYCRTGFH-LEIFPNGTVHGTRHDHSRF
40 50 60 70 80 90
60 70 80 90 100 110
pF1KB6 IQLQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYISK-
:.. . .:: . :.....: ::.:. : ::::. ..::.: :..::: :::: :
CCDS75 GILEFISLAVGLISIRGVDSGLYLGMNERGELYGSKKLTRECVFREQFEENWYNTYASTL
100 110 120 130 140 150
120 130 140 150
pF1KB6 -KHA--EKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
::. :....:.:.:.:: ..: ::. :: ::: ::
CCDS75 YKHSDSERQYYVALNKDGSPREGYRTKRHQKFTHFLPRPVDPSKLPSMSRDLFHYR
160 170 180 190 200
>>CCDS9501.1 FGF14 gene_id:2259|Hs108|chr13 (247 aa)
initn: 298 init1: 169 opt: 280 Z-score: 366.0 bits: 74.5 E(32554): 4.6e-14
Smith-Waterman score: 280; 36.7% identity (66.4% similar) in 128 aa overlap (29-152:75-201)
10 20 30 40 50
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQ
::: .: ..:.. :::..:::.: : .
CCDS95 VDIFSKVRIFGLKKRRLRRQDPQLKGIVTRLYCRQG-YYLQMHPDGALDGTKDDSTNSTL
50 60 70 80 90 100
60 70 80 90 100 110
pF1KB6 LQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYIS----
..: .. : :....:: :.::. .: :: :. . :: : : . ::.: : :
CCDS95 FNLIPVGLRVVAIQGVKTGLYIAMNGEGYLYPSELFTPECKFKESVFENYYVIYSSMLYR
110 120 130 140 150 160
120 130 140 150
pF1KB6 KKHAEKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
.... . ::.::.:.:. .: :.. . : ::: :.
CCDS95 QQESGRAWFLGLNKEGQAMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDVGETVPKPGV
170 180 190 200 210 220
CCDS95 TPSKSTSASAIMNGGKPVNKSKTT
230 240
>>CCDS9500.1 FGF14 gene_id:2259|Hs108|chr13 (252 aa)
initn: 298 init1: 169 opt: 280 Z-score: 365.9 bits: 74.5 E(32554): 4.7e-14
Smith-Waterman score: 280; 36.7% identity (66.4% similar) in 128 aa overlap (29-152:80-206)
10 20 30 40 50
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQ
::: .: ..:.. :::..:::.: : .
CCDS95 GTHMLQCLCGKSLKKNKNPTDPQLKGIVTRLYCRQG-YYLQMHPDGALDGTKDDSTNSTL
50 60 70 80 90 100
60 70 80 90 100 110
pF1KB6 LQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLEENHYNTYIS----
..: .. : :....:: :.::. .: :: :. . :: : : . ::.: : :
CCDS95 FNLIPVGLRVVAIQGVKTGLYIAMNGEGYLYPSELFTPECKFKESVFENYYVIYSSMLYR
110 120 130 140 150 160
120 130 140 150
pF1KB6 KKHAEKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
.... . ::.::.:.:. .: :.. . : ::: :.
CCDS95 QQESGRAWFLGLNKEGQAMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDVGETVPKPGV
170 180 190 200 210 220
CCDS95 TPSKSTSASAIMNGGKPVNKSKTT
230 240 250
>>CCDS10131.1 FGF7 gene_id:2252|Hs108|chr15 (194 aa)
initn: 260 init1: 199 opt: 275 Z-score: 361.2 bits: 73.3 E(32554): 8.5e-14
Smith-Waterman score: 275; 35.7% identity (65.0% similar) in 143 aa overlap (13-153:53-194)
10 20 30 40
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILP
:.... :. . . :.: . .:::
CCDS10 CLVGTISLACNDMTPEQMATNVNCSSPERHTRSYDYMEGGDIRVRRLFCRTQW-YLRIDK
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB6 DGTVDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLE
: : ::.. .... ... . .:: : ::..:. ::::. .: ::... ::.: : :
CCDS10 RGKVKGTQEMKNNYNIMEIRTVAVGIVAIKGVESEFYLAMNKEGKLYAKKECNEDCNFKE
90 100 110 120 130 140
110 120 130 140 150
pF1KB6 RLEENHYNTYISKK--HAEKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
. ::::::: : : : . ::.:...: :: .:. ::. :::. ..
CCDS10 LILENHYNTYASAKWTHNGGEMFVALNQKGIPVRGKKTKKEQKTAHFLPMAIT
150 160 170 180 190
>>CCDS3950.1 FGF10 gene_id:2255|Hs108|chr5 (208 aa)
initn: 238 init1: 205 opt: 270 Z-score: 354.3 bits: 72.1 E(32554): 2.1e-13
Smith-Waterman score: 270; 34.0% identity (65.2% similar) in 141 aa overlap (16-154:70-208)
10 20 30 40
pF1KB6 MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGT
.: :. . ::. .. .::.: .:
CCDS39 LGQDMVSPEATNSSSSSFSSPSSAGRHVRSYNHLQGDVRWRKLFSFTK--YFLKIEKNGK
40 50 60 70 80 90
50 60 70 80 90 100
pF1KB6 VDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQTPNEECLFLERLE
:.::. .. . :.... .: : .:. ... ::::. : ::::. :..: . ::.:
CCDS39 VSGTKKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSKEFNNDCKLKERIE
100 110 120 130 140 150
110 120 130 140 150
pF1KB6 ENHYNTYIS--KKHAEKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPVSSD
:: :::: : .: .. .:.:. .:. .:: .:. . . :::. : :
CCDS39 ENGYNTYASFNWQHNGRQMYVALNGKGAPRRGQKTRRKNTSAHFLPMVVHS
160 170 180 190 200
155 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:12:54 2016 done: Fri Nov 4 15:12:54 2016
Total Scan time: 1.830 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]