Result of FASTA (ccds) for
pF1KB6772
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6772, 151 aa
1>>>pF1KB6772 151 - 151 aa - 151 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1016+/-0.000813; mu= 12.8971+/- 0.049
mean_var=68.9777+/-14.075, 0's: 0 Z-trim(107.0): 58 B-trim: 2 in 1/51
Lambda= 0.154426
statistics sampled from 9258 (9319) to 9258 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.286), width: 16
Scan time: 1.740
The best scores are: opt bits E(32554)
CCDS8906.1 MYL6 gene_id:4637|Hs108|chr12 ( 151) 1003 232.0 1.1e-61
CCDS31834.1 MYL6 gene_id:4637|Hs108|chr12 ( 151) 974 225.5 9.5e-60
CCDS8905.1 MYL6B gene_id:140465|Hs108|chr12 ( 208) 829 193.3 6.5e-50
CCDS11510.1 MYL4 gene_id:4635|Hs108|chr17 ( 197) 790 184.6 2.6e-47
CCDS2391.1 MYL1 gene_id:4632|Hs108|chr2 ( 150) 763 178.5 1.3e-45
CCDS2390.1 MYL1 gene_id:4632|Hs108|chr2 ( 194) 754 176.6 6.6e-45
CCDS2746.1 MYL3 gene_id:4634|Hs108|chr3 ( 195) 752 176.2 9e-45
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 430 104.3 2.9e-23
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 428 103.9 3.9e-23
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 428 103.9 3.9e-23
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 428 103.9 3.9e-23
CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 ( 160) 300 75.4 1.6e-14
CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 ( 161) 276 70.0 6.5e-13
CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 ( 172) 260 66.5 8.1e-12
CCDS10226.2 CALML4 gene_id:91860|Hs108|chr15 ( 196) 251 64.5 3.6e-11
CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 ( 146) 245 63.1 7.2e-11
CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX ( 172) 245 63.2 8.2e-11
>>CCDS8906.1 MYL6 gene_id:4637|Hs108|chr12 (151 aa)
initn: 1003 init1: 1003 opt: 1003 Z-score: 1221.1 bits: 232.0 E(32554): 1.1e-61
Smith-Waterman score: 1003; 100.0% identity (100.0% similar) in 151 aa overlap (1-151:1-151)
10 20 30 40 50 60
pF1KB6 MCDFTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 MCDFTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 NVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS89 NVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM
70 80 90 100 110 120
130 140 150
pF1KB6 TEEEVEMLVAGHEDSNGCINYEAFVRHILSG
:::::::::::::::::::::::::::::::
CCDS89 TEEEVEMLVAGHEDSNGCINYEAFVRHILSG
130 140 150
>>CCDS31834.1 MYL6 gene_id:4637|Hs108|chr12 (151 aa)
initn: 1052 init1: 974 opt: 974 Z-score: 1186.2 bits: 225.5 E(32554): 9.5e-60
Smith-Waterman score: 974; 96.7% identity (98.7% similar) in 151 aa overlap (1-151:1-151)
10 20 30 40 50 60
pF1KB6 MCDFTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MCDFTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 NVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM
70 80 90 100 110 120
130 140 150
pF1KB6 TEEEVEMLVAGHEDSNGCINYEAFVRHILSG
:::::::::::::::::::::: .:: .:.:
CCDS31 TEEEVEMLVAGHEDSNGCINYEELVRMVLNG
130 140 150
>>CCDS8905.1 MYL6B gene_id:140465|Hs108|chr12 (208 aa)
initn: 829 init1: 829 opt: 829 Z-score: 1009.6 bits: 193.3 E(32554): 6.5e-50
Smith-Waterman score: 829; 81.8% identity (94.6% similar) in 148 aa overlap (3-150:60-207)
10 20 30
pF1KB6 MCDFTEDQTAEFKEAFQLFDRTGDGKILYSQC
.:..:: ::::::.::::.::::::::::
CCDS89 PPAKTKAEPAVPQAPQKTQEPPVDLSKVVIEFNKDQLEEFKEAFELFDRVGDGKILYSQC
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB6 GDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEG
:::::::::::::::::::::::::::.. . .::: ::::::.::::. :::::::.::
CCDS89 GDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEG
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB6 LRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEMLVAGHEDSNGCINYEAFVRHILSG
.::::::::: :::::.::::.:::::::::::: ..:::::::::::::::..::::
CCDS89 FRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHEDSNGCINYEAFLKHILSV
150 160 170 180 190 200
>>CCDS11510.1 MYL4 gene_id:4635|Hs108|chr17 (197 aa)
initn: 704 init1: 704 opt: 790 Z-score: 963.0 bits: 184.6 E(32554): 2.6e-47
Smith-Waterman score: 790; 77.5% identity (92.7% similar) in 151 aa overlap (3-151:47-197)
10 20 30
pF1KB6 MCDFTEDQTAEFKEAFQLFDRT--GDGKILYS
::: :: ::::::.::::: :. :: :.
CCDS11 PAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYG
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB6 QCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVLDFEHFLPMLQTVAKNKDQGTYEDYV
:::::.:::::::::::::.:::.:: .:::::.:::: :::.:: ...::.::::::.:
CCDS11 QCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFV
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB6 EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEMLVAGHEDSNGCINYEAFVRHILS
:::::::::.::::::::.::::.:::::::: :::.:.::.::.::::::::::.::.:
CCDS11 EGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQEDANGCINYEAFVKHIMS
140 150 160 170 180 190
pF1KB6 G
:
CCDS11 G
>>CCDS2391.1 MYL1 gene_id:4632|Hs108|chr2 (150 aa)
initn: 836 init1: 754 opt: 763 Z-score: 932.1 bits: 178.5 E(32554): 1.3e-45
Smith-Waterman score: 763; 76.2% identity (92.5% similar) in 147 aa overlap (4-150:3-149)
10 20 30 40 50 60
pF1KB6 MCDFTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEM
:. :: ::::::: :::::::.:: :: :::.:::: ::::::: ::::::...:.
CCDS23 MSFSADQIAEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEEL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 NVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM
:.: ..::.::::.:....::::.::::.:::::::::::::::::::.::::.::::::
CCDS23 NAKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKM
60 70 80 90 100 110
130 140 150
pF1KB6 TEEEVEMLVAGHEDSNGCINYEAFVRHILSG
::::: :.::.:::::::::::::.::.:
CCDS23 KEEEVEALMAGQEDSNGCINYEAFVKHIMSI
120 130 140 150
>>CCDS2390.1 MYL1 gene_id:4632|Hs108|chr2 (194 aa)
initn: 817 init1: 735 opt: 754 Z-score: 919.7 bits: 176.6 E(32554): 6.6e-45
Smith-Waterman score: 754; 74.3% identity (92.6% similar) in 148 aa overlap (3-150:46-193)
10 20 30
pF1KB6 MCDFTEDQTAEFKEAFQLFDRTGDGKILYSQC
.:...: :::::: :::::::.:: ::
CCDS23 AAPAPAPAPAPAPAPAKPKEEKIDLSAIKIEFSKEQQDEFKEAFLLFDRTGDSKITLSQV
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB6 GDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEG
:::.:::: ::::::: ::::::...:.:.: ..::.::::.:....::::.::::.:::
CCDS23 GDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMMQAISNNKDQATYEDFVEG
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB6 LRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEMLVAGHEDSNGCINYEAFVRHILSG
::::::::::::::::.::::.:::::: ::::: :.::.:::::::::::::.::.:
CCDS23 LRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAGQEDSNGCINYEAFVKHIMSI
140 150 160 170 180 190
>>CCDS2746.1 MYL3 gene_id:4634|Hs108|chr3 (195 aa)
initn: 841 init1: 676 opt: 752 Z-score: 917.3 bits: 176.2 E(32554): 9e-45
Smith-Waterman score: 752; 73.3% identity (92.0% similar) in 150 aa overlap (3-150:45-194)
10 20 30
pF1KB6 MCDFTEDQTAEFKEAFQLFDRTG--DGKILYS
.:: .: ::::::.::::: . :: :.
CCDS27 AAPKAAPAPAPPPEPERPKEVEFDASKIKIEFTPEQIEEFKEAFMLFDRTPKCEMKITYG
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB6 QCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVLDFEHFLPMLQTVAKNKDQGTYEDYV
:::::.::::::::.::::.:::.:...:.:.:..::: :::::: ..:::: :::::.:
CCDS27 QCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPMLQHISKNKDTGTYEDFV
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB6 EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEMLVAGHEDSNGCINYEAFVRHILS
::::::::::::::::::.::::.::::..::.::: :.::.:::::::::::::.::.:
CCDS27 EGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQEDSNGCINYEAFVKHIMS
140 150 160 170 180 190
pF1KB6 G
CCDS27 S
>>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 (149 aa)
initn: 480 init1: 185 opt: 430 Z-score: 531.2 bits: 104.3 E(32554): 2.9e-23
Smith-Waterman score: 430; 48.7% identity (73.7% similar) in 152 aa overlap (1-150:1-148)
10 20 30 40 50
pF1KB6 MCD-FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDE
: : .::.:..::::::.:::. ::: : . : :::.::::::.::. .... :
CCDS70 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRD-
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 MNVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEK
. ..:: .:: :. : :: . :. :..:::::.::: : .::.:::.. ::::
CCDS70 -GNGTVDFPEFLGMMAR--KMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEK
60 70 80 90 100 110
120 130 140 150
pF1KB6 MTEEEV-EMLVAGHEDSNGCINYEAFVRHILSG
...::: ::. :. :..: .::: ::: ..:
CCDS70 LSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK
120 130 140
>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 (149 aa)
initn: 436 init1: 197 opt: 428 Z-score: 528.8 bits: 103.9 E(32554): 3.9e-23
Smith-Waterman score: 428; 48.0% identity (74.0% similar) in 150 aa overlap (1-148:1-146)
10 20 30 40 50
pF1KB6 MCD-FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDE
: : .::.: :::::::.:::. ::: : .. : :::.::::::.::. .... .:
CCDS98 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 MNVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEK
.. .:: .:: :. : :: . :. :..:::::.::: . .::.:::...::::
CCDS98 NGT--IDFPEFLTMMAR--KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK
70 80 90 100 110
120 130 140 150
pF1KB6 MTEEEV-EMLVAGHEDSNGCINYEAFVRHILSG
.:.::: ::. . :..: .::: ::. .
CCDS98 LTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
120 130 140
>>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 (149 aa)
initn: 436 init1: 197 opt: 428 Z-score: 528.8 bits: 103.9 E(32554): 3.9e-23
Smith-Waterman score: 428; 48.0% identity (74.0% similar) in 150 aa overlap (1-148:1-146)
10 20 30 40 50
pF1KB6 MCD-FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDE
: : .::.: :::::::.:::. ::: : .. : :::.::::::.::. .... .:
CCDS33 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 MNVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEK
.. .:: .:: :. : :: . :. :..:::::.::: . .::.:::...::::
CCDS33 NGT--IDFPEFLTMMAR--KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK
70 80 90 100 110
120 130 140 150
pF1KB6 MTEEEV-EMLVAGHEDSNGCINYEAFVRHILSG
.:.::: ::. . :..: .::: ::. .
CCDS33 LTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
120 130 140
151 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:57:48 2016 done: Sat Nov 5 13:57:48 2016
Total Scan time: 1.740 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]