Result of FASTA (omim) for
pF1KB6671
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6671, 426 aa
1>>>pF1KB6671 426 - 426 aa - 426 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8314+/-0.000361; mu= 14.2337+/- 0.023
mean_var=66.8289+/-13.697, 0's: 0 Z-trim(113.0): 54 B-trim: 0 in 0/54
Lambda= 0.156889
statistics sampled from 22056 (22110) to 22056 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.259), width: 16
Scan time: 7.850
The best scores are: opt bits E(85289)
NP_057272 (OMIM: 612458) actin-like protein 6B [Ho ( 426) 2893 663.8 2.2e-190
NP_004292 (OMIM: 604958) actin-like protein 6A iso ( 429) 2505 576.0 6.2e-164
NP_817126 (OMIM: 604958) actin-like protein 6A iso ( 387) 2236 515.1 1.2e-145
NP_829888 (OMIM: 604958) actin-like protein 6A iso ( 387) 2236 515.1 1.2e-145
NP_001091 (OMIM: 102610,161800,255310,616852) acti ( 377) 460 113.1 1.2e-24
NP_005150 (OMIM: 102540,612098,612794,613424) acti ( 377) 454 111.8 3.1e-24
NP_001092 (OMIM: 102630,243310,607371,608578) acti ( 375) 452 111.3 4.2e-24
NP_001186883 (OMIM: 102560,604717,614583) actin, c ( 375) 451 111.1 4.9e-24
NP_001605 (OMIM: 102560,604717,614583) actin, cyto ( 375) 451 111.1 4.9e-24
NP_001606 (OMIM: 102545) actin, gamma-enteric smoo ( 376) 445 109.7 1.3e-23
NP_001604 (OMIM: 102620,611788,613834,614042) acti ( 377) 439 108.4 3.2e-23
NP_001307784 (OMIM: 102620,611788,613834,614042) a ( 377) 439 108.4 3.2e-23
NP_001135417 (OMIM: 102620,611788,613834,614042) a ( 377) 439 108.4 3.2e-23
NP_001017992 (OMIM: 614835) beta-actin-like protei ( 376) 431 106.6 1.1e-22
NP_005726 (OMIM: 605144) beta-centractin [Homo sap ( 376) 416 103.2 1.2e-21
NP_005727 (OMIM: 605143) alpha-centractin [Homo sa ( 376) 410 101.8 3e-21
XP_016859649 (OMIM: 608914) PREDICTED: POTE ankyri ( 657) 413 102.6 3.2e-21
XP_011509518 (OMIM: 608914) PREDICTED: POTE ankyri ( 957) 413 102.6 4.5e-21
XP_016859648 (OMIM: 608914) PREDICTED: POTE ankyri ( 967) 413 102.6 4.5e-21
XP_016859650 (OMIM: 608914) PREDICTED: POTE ankyri (1075) 413 102.6 5e-21
NP_001077007 (OMIM: 608914) POTE ankyrin domain fa (1075) 413 102.6 5e-21
NP_005712 (OMIM: 604222) actin-related protein 3 i ( 418) 403 100.3 1e-20
NP_001264069 (OMIM: 604222) actin-related protein ( 367) 364 91.4 4.1e-18
XP_016858605 (OMIM: 605144) PREDICTED: beta-centra ( 332) 351 88.5 2.8e-17
NP_006677 (OMIM: 604304) actin-like protein 7B [Ho ( 415) 349 88.0 4.8e-17
NP_536356 (OMIM: 608535) actin-related protein T2 ( 377) 345 87.1 8.2e-17
XP_005263911 (OMIM: 605144) PREDICTED: beta-centra ( 302) 341 86.2 1.3e-16
NP_001186822 (OMIM: 102545) actin, gamma-enteric s ( 333) 320 81.4 3.7e-15
NP_115876 (OMIM: 608534) actin-related protein T3 ( 372) 313 79.9 1.2e-14
NP_001005386 (OMIM: 604221) actin-related protein ( 399) 310 79.2 2.1e-14
NP_006678 (OMIM: 604303) actin-like protein 7A [Ho ( 435) 308 78.8 3.1e-14
NP_612146 (OMIM: 300487) actin-related protein T1 ( 376) 301 77.2 8.1e-14
NP_005713 (OMIM: 604221) actin-related protein 2 i ( 394) 295 75.8 2.2e-13
>>NP_057272 (OMIM: 612458) actin-like protein 6B [Homo s (426 aa)
initn: 2893 init1: 2893 opt: 2893 Z-score: 3538.8 bits: 663.8 E(85289): 2.2e-190
Smith-Waterman score: 2893; 100.0% identity (100.0% similar) in 426 aa overlap (1-426:1-426)
10 20 30 40 50 60
pF1KB6 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 DGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 LNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
370 380 390 400 410 420
pF1KB6 VERKCP
::::::
NP_057 VERKCP
>>NP_004292 (OMIM: 604958) actin-like protein 6A isoform (429 aa)
initn: 2493 init1: 2209 opt: 2505 Z-score: 3064.1 bits: 576.0 E(85289): 6.2e-164
Smith-Waterman score: 2505; 83.9% identity (95.6% similar) in 429 aa overlap (1-426:1-429)
10 20 30 40 50
pF1KB6 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGG--LELEGDK
::::::::::::::::::::..::::::::::::.::::..:... .. :. .:..:::
NP_004 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 EKKG-KIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPV
:.: ..::::::.:::.. :..:::::::.:::. :.:::::::. ::::: .::::
NP_004 GKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 LMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAI
::::::::::::::::::::::.:::::::::::::::::::::::::.:::::::::::
NP_004 LMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 PVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKK
::::::::::::::::::::::.:::::::::: :...::::::.:: ::::.: :::.:
NP_004 PVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRK
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 EKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAE
::::::..:::::::: ::::::::::::::: :::::::::::::::.::::: :.:::
NP_004 EKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB6 RLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGF
::.::::::::::::::::::::::.::::::.:::::::::::::::::.:::::.:.:
NP_004 RLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSF
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB6 TDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGG
::::::::::::::::::::::.:.:.::.:: :::::::::::::::::::::::::::
NP_004 TDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGG
370 380 390 400 410 420
420
pF1KB6 KQCVERKCP
:::::::::
NP_004 KQCVERKCP
>>NP_817126 (OMIM: 604958) actin-like protein 6A isoform (387 aa)
initn: 2209 init1: 2209 opt: 2236 Z-score: 2735.8 bits: 515.1 E(85289): 1.2e-145
Smith-Waterman score: 2236; 85.6% identity (96.0% similar) in 376 aa overlap (52-426:12-387)
30 40 50 60 70 80
pF1KB6 SVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKG-KIFHIDTNALHVPRDGAE
.:..::: :.: ..::::::.:::.. :
NP_817 MVVERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENME
10 20 30 40
90 100 110 120 130 140
pF1KB6 VMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQ
..:::::::.:::. :.:::::::. ::::: .::::::::::::::::::::::::::.
NP_817 AISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEH
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB6 YNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIS
:::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::.
NP_817 YNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIT
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB6 MQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQ
:::::::::: :...::::::.:: ::::.: :::.:::::::..:::::::: ::::::
NP_817 MQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQ
170 180 190 200 210 220
270 280 290 300 310 320
pF1KB6 ASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTML
::::::::: :::::::::::::::.::::: :.:::::.::::::::::::::::::::
NP_817 ASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTML
230 240 250 260 270 280
330 340 350 360 370 380
pF1KB6 GVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIAS
::.::::::.:::::::::::::::::.:::::.:.:::::::::::::::::::::::.
NP_817 GVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIAN
290 300 310 320 330 340
390 400 410 420
pF1KB6 NSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
:.:.::.:: ::::::::::::::::::::::::::::::::::::
NP_817 NTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
350 360 370 380
>>NP_829888 (OMIM: 604958) actin-like protein 6A isoform (387 aa)
initn: 2209 init1: 2209 opt: 2236 Z-score: 2735.8 bits: 515.1 E(85289): 1.2e-145
Smith-Waterman score: 2236; 85.6% identity (96.0% similar) in 376 aa overlap (52-426:12-387)
30 40 50 60 70 80
pF1KB6 SVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKG-KIFHIDTNALHVPRDGAE
.:..::: :.: ..::::::.:::.. :
NP_829 MVVERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENME
10 20 30 40
90 100 110 120 130 140
pF1KB6 VMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQ
..:::::::.:::. :.:::::::. ::::: .::::::::::::::::::::::::::.
NP_829 AISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEH
50 60 70 80 90 100
150 160 170 180 190 200
pF1KB6 YNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIS
:::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::.
NP_829 YNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFIT
110 120 130 140 150 160
210 220 230 240 250 260
pF1KB6 MQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWHNYMCNEVIQDFQ
:::::::::: :...::::::.:: ::::.: :::.:::::::..:::::::: ::::::
NP_829 MQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQ
170 180 190 200 210 220
270 280 290 300 310 320
pF1KB6 ASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTML
::::::::: :::::::::::::::.::::: :.:::::.::::::::::::::::::::
NP_829 ASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTML
230 240 250 260 270 280
330 340 350 360 370 380
pF1KB6 GVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIAS
::.::::::.:::::::::::::::::.:::::.:.:::::::::::::::::::::::.
NP_829 GVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIAN
290 300 310 320 330 340
390 400 410 420
pF1KB6 NSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
:.:.::.:: ::::::::::::::::::::::::::::::::::::
NP_829 NTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
350 360 370 380
>>NP_001091 (OMIM: 102610,161800,255310,616852) actin, a (377 aa)
initn: 881 init1: 319 opt: 460 Z-score: 563.5 bits: 113.1 E(85289): 1.2e-24
Smith-Waterman score: 872; 37.6% identity (64.3% similar) in 417 aa overlap (9-425:5-376)
10 20 30 40 50 60
pF1KB6 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEK
::. ::: : :: :.::.::.: :.: ::. :: .. : . :.:..
NP_001 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 KGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS
.. .: . : . :...:.: .:. .. : ::. .... :. ::.:..
NP_001 -----YVGDEA-QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLT
60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVH
::: : .:.:::.:..::: .:.::... :::. .:.::.::.::::: : .:..
NP_001 EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIY
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 DGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKL
.::.: ..:.. ::: .. ... : . ... : .: ::. ::::
NP_001 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT---TAEREIVRD-------IKEKL
170 180 190 200 210
250 260 270 280 290 300
pF1KB6 PQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR
: : ::. . ...: :. ::.:.: : ::.:
NP_001 -----------CY-VALDFENEMATAASSSSLEK--------SYELPDGQVITIGNERFR
220 230 240 250
310 320 330 340 350 360
pF1KB6 IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDR
:: ::.:: . : :. ... .:: :::::: ::.. ...::.:. :..::
NP_001 CPETLFQPSFI----GMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADR
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB6 LNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
...:.. .: .:..:.:: :::.: ::::::::::.:::::::.::::.:.: .
NP_001 MQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSI
320 330 340 350 360 370
pF1KB6 VERKCP
:.:::
NP_001 VHRKCF
>>NP_005150 (OMIM: 102540,612098,612794,613424) actin, a (377 aa)
initn: 878 init1: 319 opt: 454 Z-score: 556.2 bits: 111.8 E(85289): 3.1e-24
Smith-Waterman score: 869; 37.6% identity (64.3% similar) in 417 aa overlap (9-425:5-376)
10 20 30 40 50 60
pF1KB6 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEK
.:. ::: : :: :.::.::.: :.: ::. :: .. : . :.:..
NP_005 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 KGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS
.. .: . : . :...:.: .:. .. : ::. .... :. ::.:..
NP_005 -----YVGDEA-QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLT
60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVH
::: : .:.:::.:..::: .:.::... :::. .:.::.::.::::: : .:..
NP_005 EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIY
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 DGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKL
.::.: ..:.. ::: .. ... : . ... : .: ::. ::::
NP_005 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT---TAEREIVRD-------IKEKL
170 180 190 200 210
250 260 270 280 290 300
pF1KB6 PQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR
: : ::. . ...: :. ::.:.: : ::.:
NP_005 -----------CY-VALDFENEMATAASSSSLEK--------SYELPDGQVITIGNERFR
220 230 240 250
310 320 330 340 350 360
pF1KB6 IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDR
:: ::.:: . : :. ... .:: :::::: ::.. ...::.:. :..::
NP_005 CPETLFQPSFI----GMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADR
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB6 LNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
...:.. .: .:..:.:: :::.: ::::::::::.::::::::::::.:.: .
NP_005 MQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSI
320 330 340 350 360 370
pF1KB6 VERKCP
:.:::
NP_005 VHRKCF
>>NP_001092 (OMIM: 102630,243310,607371,608578) actin, c (375 aa)
initn: 885 init1: 318 opt: 452 Z-score: 553.7 bits: 111.3 E(85289): 4.2e-24
Smith-Waterman score: 868; 36.9% identity (64.5% similar) in 417 aa overlap (9-425:3-374)
10 20 30 40 50 60
pF1KB6 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEK
:...::: : :: .::.::.: :.: ::. :: .. : . :.:..
NP_001 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 KGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS
.. .: . : . :...:.. .:. .. : ::. .... :. ::::..
NP_001 -----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVH
::: : .:.:::.:..::: .: ::... :::. .:.::.::.:.::: : ..:..
NP_001 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 DGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKL
.::.: ..:.. ::: .. ... : . .. : .: ::. ::::
NP_001 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT---TAEREIVRD-------IKEKL
170 180 190 200 210
250 260 270 280 290 300
pF1KB6 PQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR
: : ::. . ...: :. ::.:.: : ::.:
NP_001 -----------CY-VALDFEQEMATAASSSSLEK--------SYELPDGQVITIGNERFR
220 230 240 250
310 320 330 340 350 360
pF1KB6 IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDR
::.::.:: . : :. ... .:: ::.::: ::......::.:. :..::
NP_001 CPEALFQPS----FLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB6 LNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
...:.. .: .:..:.:: :::.: ::::::::::.::::::::::::.:.: .
NP_001 MQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
320 330 340 350 360
pF1KB6 VERKCP
:.:::
NP_001 VHRKCF
370
>>NP_001186883 (OMIM: 102560,604717,614583) actin, cytop (375 aa)
initn: 884 init1: 318 opt: 451 Z-score: 552.5 bits: 111.1 E(85289): 4.9e-24
Smith-Waterman score: 867; 36.9% identity (64.7% similar) in 417 aa overlap (9-425:3-374)
10 20 30 40 50 60
pF1KB6 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEK
.:..:::.: :: .::.::.: :.: ::. :: .. : . :.:..
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 KGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS
.. .: . : . :...:.. .:. .. : ::. .... :. ::::..
NP_001 -----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVH
::: : .:.:::.:..::: .: ::... :::. .:.::.::.:.::: : ..:..
NP_001 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 DGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKL
.::.: ..:.. ::: .. ... : . .. : .: ::. ::::
NP_001 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT---TAEREIVRD-------IKEKL
170 180 190 200 210
250 260 270 280 290 300
pF1KB6 PQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR
: : ::. . ...: :. ::.:.: : ::.:
NP_001 -----------CY-VALDFEQEMATAASSSSLEK--------SYELPDGQVITIGNERFR
220 230 240 250
310 320 330 340 350 360
pF1KB6 IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDR
::.::.:: . : :. ... .:: ::.::: ::......::.:. :..::
NP_001 CPEALFQPS----FLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB6 LNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
...:.. .: .:..:.:: :::.: ::::::::::.::::::::::::.:.: .
NP_001 MQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
320 330 340 350 360
pF1KB6 VERKCP
:.:::
NP_001 VHRKCF
370
>>NP_001605 (OMIM: 102560,604717,614583) actin, cytoplas (375 aa)
initn: 884 init1: 318 opt: 451 Z-score: 552.5 bits: 111.1 E(85289): 4.9e-24
Smith-Waterman score: 867; 36.9% identity (64.7% similar) in 417 aa overlap (9-425:3-374)
10 20 30 40 50 60
pF1KB6 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEK
.:..:::.: :: .::.::.: :.: ::. :: .. : . :.:..
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 KGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS
.. .: . : . :...:.. .:. .. : ::. .... :. ::::..
NP_001 -----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVH
::: : .:.:::.:..::: .: ::... :::. .:.::.::.:.::: : ..:..
NP_001 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 DGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKL
.::.: ..:.. ::: .. ... : . .. : .: ::. ::::
NP_001 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT---TAEREIVRD-------IKEKL
170 180 190 200 210
250 260 270 280 290 300
pF1KB6 PQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR
: : ::. . ...: :. ::.:.: : ::.:
NP_001 -----------CY-VALDFEQEMATAASSSSLEK--------SYELPDGQVITIGNERFR
220 230 240 250
310 320 330 340 350 360
pF1KB6 IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDR
::.::.:: . : :. ... .:: ::.::: ::......::.:. :..::
NP_001 CPEALFQPS----FLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB6 LNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
...:.. .: .:..:.:: :::.: ::::::::::.::::::::::::.:.: .
NP_001 MQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI
320 330 340 350 360
pF1KB6 VERKCP
:.:::
NP_001 VHRKCF
370
>>NP_001606 (OMIM: 102545) actin, gamma-enteric smooth m (376 aa)
initn: 861 init1: 316 opt: 445 Z-score: 545.2 bits: 109.7 E(85289): 1.3e-23
Smith-Waterman score: 852; 36.9% identity (63.8% similar) in 417 aa overlap (9-425:4-375)
10 20 30 40 50 60
pF1KB6 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEK
.:. ::: : :: .::.::.: :.: ::. :: .. : . :.:..
NP_001 MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 KGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS
.. .: . : . :...:.: .:. .. : :.. .... :. ::.:..
NP_001 -----YVGDEA-QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLT
60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVH
::: : .:.:::.:..::: .:.::... :::. .:.::.::.::::: : .:..
NP_001 EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIY
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 DGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKL
.::.: ..:.. ::: .. ... : . ... : .: ::. ::::
NP_001 EGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT---TAEREIVRD-------IKEKL
170 180 190 200 210
250 260 270 280 290 300
pF1KB6 PQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR
: : ::. . ...: :. ::.:.: : ::.:
NP_001 -----------CY-VALDFENEMATAASSSSLEK--------SYELPDGQVITIGNERFR
220 230 240 250
310 320 330 340 350 360
pF1KB6 IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDR
:: ::.:: . : :. ... .:: :::::: ::.. ...::.:. :..::
NP_001 CPETLFQPSFI----GMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADR
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB6 LNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
...:.. .: .:..:.:: :::.: ::::::::::.::::::::: ::.:.: .
NP_001 MQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSI
320 330 340 350 360 370
pF1KB6 VERKCP
:.:::
NP_001 VHRKCF
426 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:19:40 2016 done: Sat Nov 5 11:19:41 2016
Total Scan time: 7.850 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]