Result of FASTA (omim) for
pF1KB6622
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6622, 436 aa
1>>>pF1KB6622 436 - 436 aa - 436 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7729+/-0.000501; mu= 15.7313+/- 0.031
mean_var=80.5129+/-16.627, 0's: 0 Z-trim(109.2): 27 B-trim: 434 in 2/48
Lambda= 0.142936
statistics sampled from 17326 (17344) to 17326 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.547), E-opt: 0.2 (0.203), width: 16
Scan time: 8.570
The best scores are: opt bits E(85289)
XP_016859715 (OMIM: 603056,613800) PREDICTED: orig ( 436) 2829 593.6 3.4e-169
XP_011509557 (OMIM: 603056,613800) PREDICTED: orig ( 436) 2829 593.6 3.4e-169
NP_859525 (OMIM: 603056,613800) origin recognition ( 436) 2829 593.6 3.4e-169
NP_002543 (OMIM: 603056,613800) origin recognition ( 436) 2829 593.6 3.4e-169
NP_859526 (OMIM: 603056,613800) origin recognition ( 436) 2829 593.6 3.4e-169
NP_001177808 (OMIM: 603056,613800) origin recognit ( 436) 2829 593.6 3.4e-169
NP_001177811 (OMIM: 603056,613800) origin recognit ( 362) 2348 494.3 2.1e-139
NP_001177810 (OMIM: 603056,613800) origin recognit ( 352) 2293 483.0 5.3e-136
XP_016859716 (OMIM: 603056,613800) PREDICTED: orig ( 352) 2293 483.0 5.3e-136
XP_011539829 (OMIM: 224690,601902) PREDICTED: orig ( 501) 164 44.0 0.001
XP_016856878 (OMIM: 224690,601902) PREDICTED: orig ( 615) 164 44.1 0.0012
NP_001177748 (OMIM: 224690,601902) origin recognit ( 856) 164 44.2 0.0016
NP_004144 (OMIM: 224690,601902) origin recognition ( 861) 164 44.2 0.0016
NP_001177747 (OMIM: 224690,601902) origin recognit ( 861) 164 44.2 0.0016
>>XP_016859715 (OMIM: 603056,613800) PREDICTED: origin r (436 aa)
initn: 2829 init1: 2829 opt: 2829 Z-score: 3158.6 bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)
10 20 30 40 50 60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
XP_016 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
370 380 390 400 410 420
430
pF1KB6 CPTDVRQWATSSLSWL
::::::::::::::::
XP_016 CPTDVRQWATSSLSWL
430
>>XP_011509557 (OMIM: 603056,613800) PREDICTED: origin r (436 aa)
initn: 2829 init1: 2829 opt: 2829 Z-score: 3158.6 bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)
10 20 30 40 50 60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
XP_011 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
370 380 390 400 410 420
430
pF1KB6 CPTDVRQWATSSLSWL
::::::::::::::::
XP_011 CPTDVRQWATSSLSWL
430
>>NP_859525 (OMIM: 603056,613800) origin recognition com (436 aa)
initn: 2829 init1: 2829 opt: 2829 Z-score: 3158.6 bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)
10 20 30 40 50 60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_859 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
370 380 390 400 410 420
430
pF1KB6 CPTDVRQWATSSLSWL
::::::::::::::::
NP_859 CPTDVRQWATSSLSWL
430
>>NP_002543 (OMIM: 603056,613800) origin recognition com (436 aa)
initn: 2829 init1: 2829 opt: 2829 Z-score: 3158.6 bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)
10 20 30 40 50 60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_002 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
370 380 390 400 410 420
430
pF1KB6 CPTDVRQWATSSLSWL
::::::::::::::::
NP_002 CPTDVRQWATSSLSWL
430
>>NP_859526 (OMIM: 603056,613800) origin recognition com (436 aa)
initn: 2829 init1: 2829 opt: 2829 Z-score: 3158.6 bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)
10 20 30 40 50 60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_859 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
370 380 390 400 410 420
430
pF1KB6 CPTDVRQWATSSLSWL
::::::::::::::::
NP_859 CPTDVRQWATSSLSWL
430
>>NP_001177808 (OMIM: 603056,613800) origin recognition (436 aa)
initn: 2829 init1: 2829 opt: 2829 Z-score: 3158.6 bits: 593.6 E(85289): 3.4e-169
Smith-Waterman score: 2829; 99.8% identity (100.0% similar) in 436 aa overlap (1-436:1-436)
10 20 30 40 50 60
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 NSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
370 380 390 400 410 420
430
pF1KB6 CPTDVRQWATSSLSWL
::::::::::::::::
NP_001 CPTDVRQWATSSLSWL
430
>>NP_001177811 (OMIM: 603056,613800) origin recognition (362 aa)
initn: 2348 init1: 2348 opt: 2348 Z-score: 2623.8 bits: 494.3 E(85289): 2.1e-139
Smith-Waterman score: 2348; 99.7% identity (100.0% similar) in 362 aa overlap (75-436:1-362)
50 60 70 80 90 100
pF1KB6 KHLSELLKRTALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQ
:::.::::::::::::::::::::::::::
NP_001 MLINHALKELMEIEEVSENVLQVHLNGLLQ
10 20 30
110 120 130 140 150 160
pF1KB6 INDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLF
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB6 AHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFP
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB6 QYVKIFKEQLSLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QYVKIFKEQLSLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLM
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB6 LALNRVTASHPFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LALNRVTASHPFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPF
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB6 NFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKL
280 290 300 310 320 330
410 420 430
pF1KB6 LLDNTQIMNALQKYPNCPTDVRQWATSSLSWL
::::::::::::::::::::::::::::::::
NP_001 LLDNTQIMNALQKYPNCPTDVRQWATSSLSWL
340 350 360
>>NP_001177810 (OMIM: 603056,613800) origin recognition (352 aa)
initn: 2293 init1: 2293 opt: 2293 Z-score: 2562.6 bits: 483.0 E(85289): 5.3e-136
Smith-Waterman score: 2293; 100.0% identity (100.0% similar) in 352 aa overlap (85-436:1-352)
60 70 80 90 100 110
pF1KB6 ALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEI
::::::::::::::::::::::::::::::
NP_001 MEIEEVSENVLQVHLNGLLQINDKIALKEI
10 20 30
120 130 140 150 160 170
pF1KB6 TRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLY
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB6 NLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQL
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB6 SLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASH
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB6 PFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQ
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB6 KFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNA
280 290 300 310 320 330
420 430
pF1KB6 LQKYPNCPTDVRQWATSSLSWL
::::::::::::::::::::::
NP_001 LQKYPNCPTDVRQWATSSLSWL
340 350
>>XP_016859716 (OMIM: 603056,613800) PREDICTED: origin r (352 aa)
initn: 2293 init1: 2293 opt: 2293 Z-score: 2562.6 bits: 483.0 E(85289): 5.3e-136
Smith-Waterman score: 2293; 100.0% identity (100.0% similar) in 352 aa overlap (85-436:1-352)
60 70 80 90 100 110
pF1KB6 ALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEI
::::::::::::::::::::::::::::::
XP_016 MEIEEVSENVLQVHLNGLLQINDKIALKEI
10 20 30
120 130 140 150 160 170
pF1KB6 TRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLY
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB6 NLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQL
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB6 SLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASH
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB6 PFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQ
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB6 KFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNA
280 290 300 310 320 330
420 430
pF1KB6 LQKYPNCPTDVRQWATSSLSWL
::::::::::::::::::::::
XP_016 LQKYPNCPTDVRQWATSSLSWL
340 350
>>XP_011539829 (OMIM: 224690,601902) PREDICTED: origin r (501 aa)
initn: 50 init1: 50 opt: 164 Z-score: 187.7 bits: 44.0 E(85289): 0.001
Smith-Waterman score: 174; 21.3% identity (57.1% similar) in 352 aa overlap (7-352:115-441)
10 20 30
pF1KB6 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSN
.: :: : : ... : :. .. .
XP_011 SSLKSSLHTLTKVPKKSLKPRTPRCAAPQIRSRSLAAQEPASVLEEA-RLRLHVSAVPES
90 100 110 120 130 140
40 50 60 70 80 90
pF1KB6 LFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSE--NV
: . ... . .... : .. . : : :.::: . .... :.. ....
XP_011 LPCREQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPF
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB6 LQVHLNGLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPV
...::. .... ... :. :....:.:. .. : .: . . .:. . .
XP_011 QYIEVNGM-KLTEP---HQVYVQI-LQKLTGQKATANHAAEL-LAKQFCTRGSPQET--T
210 220 230 240 250
160 170 180 190 200 210
pF1KB6 IFILDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILE-LLEKRVKSRFSHR
....::.::. :: : ..::::: .. ..:.... .:. : .. .::.::..
XP_011 VLLVDELDLLWTHK-QDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLT
260 270 280 290 300 310
220 230 240 250 260 270
pF1KB6 QIHLMNSFGFPQYVKIFKEQLSLPAEFPDKVFAEKWNENVQYLSED-RSVQEVLQKHFNI
.. .. . . : .:.. .:. : : .. . ..: :: : : .. .. .:
XP_011 RM-CFQPYTYSQLQQILRSRLKHLKAFEDDAI-QLVARKVAALSGDARRCLDICRRATEI
320 330 340 350 360 370
280 290 300 310 320 330
pF1KB6 SKNLRSLHMLLMLALNRVTASHPFMTAVDLMEASQLCSMDSKANIVHGLSVLEICLIIAM
. . . . . :: .: : ::: : .: : . ... :::: .. :.
XP_011 CE----FSQQKPDSPGLVTIAHS-MEAVDEMFSS------SYITAIKNSSVLEQSFLRAI
380 390 400 410 420
340 350 360 370 380 390
pF1KB6 KHLNDIYEE--EPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMER
: .. . : .::..:..
XP_011 --LAEFRRSGLEEATFQQIYSQHVALCRMEGLPYPTMSETMAVCSHLGSCRLLLVEPSRN
430 440 450 460 470
436 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:47:36 2016 done: Sat Nov 5 18:47:37 2016
Total Scan time: 8.570 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]