Result of FASTA (omim) for
pF1KB6579
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6579, 377 aa
1>>>pF1KB6579 377 - 377 aa - 377 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3463+/-0.000456; mu= 16.1182+/- 0.028
mean_var=60.7110+/-11.937, 0's: 0 Z-trim(109.5): 36 B-trim: 213 in 1/48
Lambda= 0.164604
statistics sampled from 17638 (17674) to 17638 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.572), E-opt: 0.2 (0.207), width: 16
Scan time: 7.040
The best scores are: opt bits E(85289)
NP_001091 (OMIM: 102610,161800,255310,616852) acti ( 377) 2510 604.9 9.7e-173
NP_005150 (OMIM: 102540,612098,612794,613424) acti ( 377) 2493 600.9 1.6e-171
NP_001135417 (OMIM: 102620,611788,613834,614042) a ( 377) 2475 596.6 3.1e-170
NP_001307784 (OMIM: 102620,611788,613834,614042) a ( 377) 2475 596.6 3.1e-170
NP_001604 (OMIM: 102620,611788,613834,614042) acti ( 377) 2475 596.6 3.1e-170
NP_001606 (OMIM: 102545) actin, gamma-enteric smoo ( 376) 2460 593.0 3.6e-169
NP_001186883 (OMIM: 102560,604717,614583) actin, c ( 375) 2369 571.4 1.2e-162
NP_001605 (OMIM: 102560,604717,614583) actin, cyto ( 375) 2369 571.4 1.2e-162
NP_001092 (OMIM: 102630,243310,607371,608578) acti ( 375) 2368 571.2 1.4e-162
NP_001017992 (OMIM: 614835) beta-actin-like protei ( 376) 2270 547.9 1.4e-155
XP_016859649 (OMIM: 608914) PREDICTED: POTE ankyri ( 657) 2207 533.1 7.2e-151
XP_011509518 (OMIM: 608914) PREDICTED: POTE ankyri ( 957) 2207 533.1 1e-150
XP_016859648 (OMIM: 608914) PREDICTED: POTE ankyri ( 967) 2207 533.1 1e-150
NP_001077007 (OMIM: 608914) POTE ankyrin domain fa (1075) 2207 533.1 1.1e-150
XP_016859650 (OMIM: 608914) PREDICTED: POTE ankyri (1075) 2207 533.1 1.1e-150
NP_001186822 (OMIM: 102545) actin, gamma-enteric s ( 333) 1900 460.0 3.5e-129
NP_005726 (OMIM: 605144) beta-centractin [Homo sap ( 376) 1446 352.2 1.1e-96
NP_005727 (OMIM: 605143) alpha-centractin [Homo sa ( 376) 1424 347.0 4.2e-95
NP_115876 (OMIM: 608534) actin-related protein T3 ( 372) 1316 321.4 2.2e-87
XP_016858605 (OMIM: 605144) PREDICTED: beta-centra ( 332) 1286 314.2 2.7e-85
NP_612146 (OMIM: 300487) actin-related protein T1 ( 376) 1234 301.9 1.6e-81
NP_536356 (OMIM: 608535) actin-related protein T2 ( 377) 1215 297.4 3.6e-80
XP_005263911 (OMIM: 605144) PREDICTED: beta-centra ( 302) 1194 292.4 9.5e-79
NP_005713 (OMIM: 604221) actin-related protein 2 i ( 394) 1110 272.5 1.2e-72
NP_001005386 (OMIM: 604221) actin-related protein ( 399) 1098 269.6 8.8e-72
NP_006678 (OMIM: 604303) actin-like protein 7A [Ho ( 435) 1095 268.9 1.6e-71
NP_006677 (OMIM: 604304) actin-like protein 7B [Ho ( 415) 1056 259.6 9.2e-69
NP_005712 (OMIM: 604222) actin-related protein 3 i ( 418) 578 146.1 1.4e-34
NP_001264069 (OMIM: 604222) actin-related protein ( 367) 508 129.5 1.2e-29
NP_057272 (OMIM: 612458) actin-like protein 6B [Ho ( 426) 460 118.1 3.8e-26
NP_829888 (OMIM: 604958) actin-like protein 6A iso ( 387) 366 95.8 1.8e-19
NP_817126 (OMIM: 604958) actin-like protein 6A iso ( 387) 366 95.8 1.8e-19
NP_004292 (OMIM: 604958) actin-like protein 6A iso ( 429) 366 95.8 2e-19
>>NP_001091 (OMIM: 102610,161800,255310,616852) actin, a (377 aa)
initn: 2510 init1: 2510 opt: 2510 Z-score: 3222.2 bits: 604.9 E(85289): 9.7e-173
Smith-Waterman score: 2510; 100.0% identity (100.0% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_005150 (OMIM: 102540,612098,612794,613424) actin, a (377 aa)
initn: 2493 init1: 2493 opt: 2493 Z-score: 3200.4 bits: 600.9 E(85289): 1.6e-171
Smith-Waterman score: 2493; 98.9% identity (100.0% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
:::..:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_005 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_005 KQEYDEAGPSIVHRKCF
370
>>NP_001135417 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 2475 init1: 2475 opt: 2475 Z-score: 3177.3 bits: 596.6 E(85289): 3.1e-170
Smith-Waterman score: 2475; 97.9% identity (99.7% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::.:...::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001307784 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 2475 init1: 2475 opt: 2475 Z-score: 3177.3 bits: 596.6 E(85289): 3.1e-170
Smith-Waterman score: 2475; 97.9% identity (99.7% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::.:...::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001604 (OMIM: 102620,611788,613834,614042) actin, a (377 aa)
initn: 2475 init1: 2475 opt: 2475 Z-score: 3177.3 bits: 596.6 E(85289): 3.1e-170
Smith-Waterman score: 2475; 97.9% identity (99.7% similar) in 377 aa overlap (1-377:1-377)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
::.:...::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
310 320 330 340 350 360
370
pF1KB6 KQEYDEAGPSIVHRKCF
:::::::::::::::::
NP_001 KQEYDEAGPSIVHRKCF
370
>>NP_001606 (OMIM: 102545) actin, gamma-enteric smooth m (376 aa)
initn: 2452 init1: 2452 opt: 2460 Z-score: 3158.1 bits: 593.0 E(85289): 3.6e-169
Smith-Waterman score: 2460; 98.1% identity (99.2% similar) in 377 aa overlap (1-377:1-376)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
:: :.::::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_001 MC-EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_001 QSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
: :::::::::::::::
NP_001 KPEYDEAGPSIVHRKCF
360 370
>>NP_001186883 (OMIM: 102560,604717,614583) actin, cytop (375 aa)
initn: 2369 init1: 2369 opt: 2369 Z-score: 3041.3 bits: 571.4 E(85289): 1.2e-162
Smith-Waterman score: 2369; 93.9% identity (98.9% similar) in 374 aa overlap (4-377:2-375)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
:.: .::: :::::. :::::::::::::::::::::::::::::::::::::::::
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::::::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDESGPSIVHRKCF
360 370
>>NP_001605 (OMIM: 102560,604717,614583) actin, cytoplas (375 aa)
initn: 2369 init1: 2369 opt: 2369 Z-score: 3041.3 bits: 571.4 E(85289): 1.2e-162
Smith-Waterman score: 2369; 93.9% identity (98.9% similar) in 374 aa overlap (4-377:2-375)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
:.: .::: :::::. :::::::::::::::::::::::::::::::::::::::::
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::::::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDESGPSIVHRKCF
360 370
>>NP_001092 (OMIM: 102630,243310,607371,608578) actin, c (375 aa)
initn: 2368 init1: 2368 opt: 2368 Z-score: 3040.0 bits: 571.2 E(85289): 1.4e-162
Smith-Waterman score: 2368; 93.6% identity (98.9% similar) in 374 aa overlap (4-377:2-375)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
.:. .::: :::::. :::::::::::::::::::::::::::::::::::::::::
NP_001 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
:::::::::::::::::.::::::::::::::::::::::::::.:::::::::::::::
NP_001 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
::::::::::.:::::::::::::::::::::::.::::::::.:::::::::::::.::
NP_001 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::::::
NP_001 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
:::::::::::::::::::::.::::::.:::: ::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_001 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
::::::.::::::::::
NP_001 KQEYDESGPSIVHRKCF
360 370
>>NP_001017992 (OMIM: 614835) beta-actin-like protein 2 (376 aa)
initn: 2270 init1: 2270 opt: 2270 Z-score: 2914.2 bits: 547.9 E(85289): 1.4e-155
Smith-Waterman score: 2270; 87.7% identity (97.1% similar) in 374 aa overlap (4-377:3-376)
10 20 30 40 50 60
pF1KB6 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
..: .::: :::::. ::::.:::::::::::..:::::::::::::::: ::::::
NP_001 MTDNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
:::::.::::::::::..::::::::::.:::::::::::.::: :::::::::: ::::
NP_001 QSKRGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
:::::::.::.:::::::::::::::::::::::.:::::::: :::::::::::::.::
NP_001 MTQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
::::::::::::::::::::.:.::::::::::.::::::::::::.::. ::.::: :.
NP_001 DLAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVRAAASSSPER
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
:::::::::::::::::::::..:::::.:.::.::::::.:::::::.:::::::::.:
NP_001 SYELPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTV
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB6 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
.:::.:::::::::::::: .::::::::::::::::::::::::::::::::::::::.
NP_001 LSGGSTMYPGIADRMQKEIITLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
300 310 320 330 340 350
370
pF1KB6 KQEYDEAGPSIVHRKCF
::::::::: :::::::
NP_001 KQEYDEAGPPIVHRKCF
360 370
377 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:20:43 2016 done: Fri Nov 4 23:20:44 2016
Total Scan time: 7.040 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]