Result of FASTA (ccds) for
pF1KB6574
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6574, 401 aa
1>>>pF1KB6574 401 - 401 aa - 401 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1686+/-0.00105; mu= 14.2904+/- 0.063
mean_var=130.1308+/-25.730, 0's: 0 Z-trim(108.0): 59 B-trim: 6 in 1/49
Lambda= 0.112431
statistics sampled from 9908 (9958) to 9908 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.306), width: 16
Scan time: 2.660
The best scores are: opt bits E(32554)
CCDS6326.1 TNFRSF11B gene_id:4982|Hs108|chr8 ( 401) 2812 467.6 8.8e-132
CCDS13532.1 TNFRSF6B gene_id:8771|Hs108|chr20 ( 300) 597 108.2 1e-23
CCDS145.1 TNFRSF1B gene_id:7133|Hs108|chr1 ( 461) 455 85.4 1.2e-16
CCDS4921.1 TNFRSF21 gene_id:27242|Hs108|chr6 ( 655) 417 79.4 1.1e-14
CCDS59324.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 299) 384 73.7 2.6e-13
CCDS74227.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 263) 383 73.5 2.6e-13
CCDS74228.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 337) 383 73.6 3.1e-13
CCDS11980.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 616) 383 73.8 4.8e-13
CCDS13393.1 CD40 gene_id:958|Hs108|chr20 ( 277) 370 71.4 1.2e-12
CCDS59233.1 LTBR gene_id:4055|Hs108|chr12 ( 416) 339 66.5 5.1e-11
CCDS8544.1 LTBR gene_id:4055|Hs108|chr12 ( 435) 339 66.5 5.3e-11
CCDS13394.1 CD40 gene_id:958|Hs108|chr20 ( 203) 332 65.1 6.8e-11
>>CCDS6326.1 TNFRSF11B gene_id:4982|Hs108|chr8 (401 aa)
initn: 2812 init1: 2812 opt: 2812 Z-score: 2479.3 bits: 467.6 E(32554): 8.8e-132
Smith-Waterman score: 2812; 100.0% identity (100.0% similar) in 401 aa overlap (1-401:1-401)
10 20 30 40 50 60
pF1KB6 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIEFCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIEFCLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 HRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 HRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKGNAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 HDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKVNAESVERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 HDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKVNAESVERI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 KRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGHANLTFEQLRSLME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 KRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGHANLTFEQLRSLME
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 SLPGKKVGAEDIEKTIKACKPSDQILKLLSLWRIKNGDQDTLKGLMHALKHSKTYHFPKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SLPGKKVGAEDIEKTIKACKPSDQILKLLSLWRIKNGDQDTLKGLMHALKHSKTYHFPKT
310 320 330 340 350 360
370 380 390 400
pF1KB6 VTQSLKKTIRFLHSFTMYKLYQKLFLEMIGNQVQSVKISCL
:::::::::::::::::::::::::::::::::::::::::
CCDS63 VTQSLKKTIRFLHSFTMYKLYQKLFLEMIGNQVQSVKISCL
370 380 390 400
>>CCDS13532.1 TNFRSF6B gene_id:8771|Hs108|chr20 (300 aa)
initn: 637 init1: 564 opt: 597 Z-score: 539.2 bits: 108.2 E(32554): 1e-23
Smith-Waterman score: 597; 37.7% identity (64.5% similar) in 231 aa overlap (3-227:10-236)
10 20 30 40 50
pF1KB6 MNNLLCCALVF---LDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYL
.::: .:.. : . . :: : : : ::...:.: .:::::..
CCDS13 MRALEGPGLSLLCLVLALPALLPVPAVRGVAET--PTYPWRDAETGERLVCAQCPPGTFV
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 KQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEG
.. : :.:.::: ..::. :. ..: ::. .: : . . :. ::::.:.:. :
CCDS13 QRPCRRDSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEEARACHATHNRACRCRTG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 RYLEIEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFG
. . :::.: ::::: ::. ::: .:: :. :: : :: .::. :. : ::...:
CCDS13 FFAHAGFCLEHASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCTALG
120 130 140 150 160 170
180 190 200 210 220
pF1KB6 LLLTQKGNATHDNICS---GNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVLVDNL
: :. :...::..:. : ::. : . ::.: . :.. .. . :. :.. :
CCDS13 LALNVPGSSSHDTLCTSCTGFPLSTRVPGAEE--CERAVIDFVAFQDISIKRLQRLLQAL
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 PGTKVNAESVERIKRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGH
CCDS13 EAPEGWGPTPRAGRAALQLKLRRRLTELLGAQDGALLVRLLQALRVARMPGLERSVRERF
240 250 260 270 280 290
>>CCDS145.1 TNFRSF1B gene_id:7133|Hs108|chr1 (461 aa)
initn: 436 init1: 261 opt: 455 Z-score: 412.4 bits: 85.4 E(32554): 1.2e-16
Smith-Waterman score: 455; 39.3% identity (57.7% similar) in 168 aa overlap (30-191:45-206)
10 20 30 40 50
pF1KB6 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWK
.::. . :. :.:: :: . : ::
CCDS14 ELWAAAHALPAQVAFTPYAPEPGSTCRLREYYDQ--TAQMCCSKCSPGQHAKVFCTKTSD
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB6 TVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEI----
::: : : ::. :. ::: :. :. : : :.: .::.: :. : : .
CCDS14 TVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQNRICTCRPGWYCALSKQE
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB6 --EFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLL
..: :.: :::::.. :: ..::: : : ::: ::: :: : :.: ..
CCDS14 GCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICNVVAI--
140 150 160 170 180 190
180 190 200 210 220 230
pF1KB6 TQKGNATHDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKVN
:::. : .:...: .
CCDS14 --PGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQPTPEPSTAPSTSFLLPMGPS
200 210 220 230 240
>>CCDS4921.1 TNFRSF21 gene_id:27242|Hs108|chr6 (655 aa)
initn: 475 init1: 378 opt: 417 Z-score: 377.2 bits: 79.4 E(32554): 1.1e-14
Smith-Waterman score: 417; 28.5% identity (50.0% similar) in 288 aa overlap (28-308:54-334)
10 20 30 40 50
pF1KB6 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAK
: : :. :.. : ::::: :::...:::
CCDS49 TMIAGSLLLLGFLSTTTAQPEQKASNLIGTYRHVDRATGQVLTCDKCPAGTYVSEHCTNT
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB6 WKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIEF
::. :: .: . ..: :: : . : : .: : : : .
CCDS49 SLRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIEKLPCAALTDRECTCPPGMFQSNAT
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB6 CLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQKG
: : :: :.:: . :: ... ::.: : ::. :: :. .:.: .:.. . :
CCDS49 CAPHTVCPVGWGVRKKGTETEDVRCKQCARGTFSDVPSSVMKCKAYTDCLSQNLVVIKPG
150 160 170 180 190 200
180 190 200 210 220 230
pF1KB6 NATHDNIC----SGNSESTQKCGIDVTLCEEAFFRFAVPTK-FTPNWLSVLVDNLPGTKV
. ::.: : .: .. . : . : . ::.. ..:. .. .:.
CCDS49 TKETDNVCGTLPSFSSSTSPSPGTAIFPRPEHMETHEVPSSTYVPKGMN-------STES
210 220 230 240 250
240 250 260 270 280 290
pF1KB6 NAESVERIKRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGHANLTF
:. . : : : :: : . ..: . . .: .. .. .::: . ..
CCDS49 NSSASVRPKVLSSIQEGTVPDNTSSARGKEDVNKTLPNLQVVNHQQGPHHRHILKLLPSM
260 270 280 290 300 310
300 310 320 330 340 350
pF1KB6 EQLRSLMESLP--GKKVGAEDIEKTIKACKPSDQILKLLSLWRIKNGDQDTLKGLMHALK
: . : : : : :
CCDS49 EATGGEKSSTPIKGPKRGHPRQNLHKHFDINEHLPWMIVLFLLLVLVVIVVCSIRKSSRT
320 330 340 350 360 370
>>CCDS59324.1 TNFRSF11A gene_id:8792|Hs108|chr18 (299 aa)
initn: 348 init1: 193 opt: 384 Z-score: 352.5 bits: 73.7 E(32554): 2.6e-13
Smith-Waterman score: 384; 33.5% identity (55.2% similar) in 203 aa overlap (4-200:16-209)
10 20 30 40
pF1KB6 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGT
::: :. :..... . : .: : . :.:: ::
CCDS59 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTSEKHYEHLGR------CCNKCEPGK
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 YLKQHCTAKWKTVCAPC-PDHYYTDSWHTSDECLYCSPVC---KELQYVKQECNRTHNRV
:....::. .:: :: ::.: :::. :.:: :: : : : : : :
CCDS59 YMSSKCTTTSDSVCLPCGPDEYL-DSWNEEDKCLL-HKVCDTGKALVAVVAG-NSTTPRR
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 CECKEGRYL--EIEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRK
: : : . . : : .. : ::.:. . ...:::: : :.::. :: ::
CCDS59 CACTAGYHWSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRP
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 HTNCSVFGLLLTQKGNATHDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSV
:::. .: . ..:. : .::.. . . . .::
CCDS59 WTNCTFLGKRVEHHGTEKSDAVCSSSLPARKPPNGNVTGNSNSTFISSGQVMNFKGDIIV
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 LVDNLPGTKVNAESVERIKRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQ
CCDS59 VYVSQTSQEGAAAAAEPMGRPVQEETLARRDSFAGNGPRFPDPCGGPEGLREPEKASRPV
240 250 260 270 280 290
>>CCDS74227.1 TNFRSF11A gene_id:8792|Hs108|chr18 (263 aa)
initn: 319 init1: 169 opt: 383 Z-score: 352.3 bits: 73.5 E(32554): 2.6e-13
Smith-Waterman score: 383; 33.7% identity (54.2% similar) in 190 aa overlap (4-188:16-197)
10 20 30 40
pF1KB6 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGT
::: :. :..... . : .: : . :.:: ::
CCDS74 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTSEKHYEHLGR------CCNKCEPGK
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 YLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVC---KELQYVKQECNRTHNRVC
:....::. .:: :: : :::. :.:: :: : : : : : : :
CCDS74 YMSSKCTTTSDSVCLPCGPDEYLDSWNEEDKCLL-HKVCDTGKALVAVVAG-NSTTPRRC
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 ECKEGRYL--EIEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKH
: : . . : : .. : ::.:. . ...:::: : :.::. :: ::
CCDS74 ACTAGYHWSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPW
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 TNCSVFGLLLTQKGNATHDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVL
:::. .: . ..:. : .::..
CCDS74 TNCTFLGKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILLLFASVALVAAIIFG
180 190 200 210 220 230
>>CCDS74228.1 TNFRSF11A gene_id:8792|Hs108|chr18 (337 aa)
initn: 319 init1: 169 opt: 383 Z-score: 351.0 bits: 73.6 E(32554): 3.1e-13
Smith-Waterman score: 383; 33.7% identity (54.2% similar) in 190 aa overlap (4-188:16-197)
10 20 30 40
pF1KB6 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGT
::: :. :..... . : .: : . :.:: ::
CCDS74 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTSEKHYEHLGR------CCNKCEPGK
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 YLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVC---KELQYVKQECNRTHNRVC
:....::. .:: :: : :::. :.:: :: : : : : : : :
CCDS74 YMSSKCTTTSDSVCLPCGPDEYLDSWNEEDKCLL-HKVCDTGKALVAVVAG-NSTTPRRC
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 ECKEGRYL--EIEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKH
: : . . : : .. : ::.:. . ...:::: : :.::. :: ::
CCDS74 ACTAGYHWSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPW
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 TNCSVFGLLLTQKGNATHDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVL
:::. .: . ..:. : .::..
CCDS74 TNCTFLGKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILLLFASVALVAAIIFG
180 190 200 210 220 230
>>CCDS11980.1 TNFRSF11A gene_id:8792|Hs108|chr18 (616 aa)
initn: 319 init1: 169 opt: 383 Z-score: 347.7 bits: 73.8 E(32554): 4.8e-13
Smith-Waterman score: 383; 33.7% identity (54.2% similar) in 190 aa overlap (4-188:16-197)
10 20 30 40
pF1KB6 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGT
::: :. :..... . : .: : . :.:: ::
CCDS11 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTSEKHYEHLGR------CCNKCEPGK
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 YLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVC---KELQYVKQECNRTHNRVC
:....::. .:: :: : :::. :.:: :: : : : : : : :
CCDS11 YMSSKCTTTSDSVCLPCGPDEYLDSWNEEDKCLL-HKVCDTGKALVAVVAG-NSTTPRRC
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 ECKEGRYL--EIEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKH
: : . . : : .. : ::.:. . ...:::: : :.::. :: ::
CCDS11 ACTAGYHWSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPW
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 TNCSVFGLLLTQKGNATHDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVL
:::. .: . ..:. : .::..
CCDS11 TNCTFLGKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILLLFASVALVAAIIFG
180 190 200 210 220 230
>>CCDS13393.1 CD40 gene_id:958|Hs108|chr20 (277 aa)
initn: 291 init1: 157 opt: 370 Z-score: 340.6 bits: 71.4 E(32554): 1.2e-12
Smith-Waterman score: 370; 33.5% identity (54.5% similar) in 167 aa overlap (25-185:22-186)
10 20 30 40 50 60
pF1KB6 MNNLLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKT
:: . . .. :. : :: : . :: .:
CCDS13 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTET
10 20 30 40 50
70 80 90 100 110
pF1KB6 VCAPCPDHYYTDSWHTSDECL---YCSPVCKELQYVKQECNRTHNRVCECKEGRYLE---
: :: . . :.:. .: ::.: . :.:. . . .: :.:: .
CCDS13 ECLPCGESEFLDTWNRETHCHQHKYCDP--NLGLRVQQKGTSETDTICTCEEGWHCTSEA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 IEFCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLT
: :. :::: ::::: : .: .:.:. :: ::::: .:. :. :.: . :..
CCDS13 CESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 QKGNATHDNICSGNSESTQKCGIDVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKVNA
: :. : .:
CCDS13 QAGTNKTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAKKPTNKAPHPKQEPQE
180 190 200 210 220 230
>>CCDS59233.1 LTBR gene_id:4055|Hs108|chr12 (416 aa)
initn: 162 init1: 125 opt: 339 Z-score: 311.3 bits: 66.5 E(32554): 5.1e-11
Smith-Waterman score: 341; 29.9% identity (54.2% similar) in 201 aa overlap (34-221:33-231)
10 20 30 40 50 60
pF1KB6 LLCCALVFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTAKWKTVCA
: .:.. :..::::::.. .:. ::::
CCDS59 ATGISLASQLKVPPYASENQTCRDQEKEYYEPQHRICCSRCPPGTYVSAKCSRIRDTVCA
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 PCPDHYYTDSWHTSDECLYCSPVCKELQYVKQ--ECNRTHNRVCECKEGRY-----LEIE
: .. :.. :. : : : : .. ... :. .. :.:. : . ::
CCDS59 TCAENSYNEHWNYLTICQLCRP-CDPVMGLEEIAPCTSKRKTQCRCQPGMFCAAWALECT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 FCLKHRSCPPGFGV-VQAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSVFGLLLTQ
: .:::: . .. . . :. : : : :.: .: .: :. :: : ::. .
CCDS59 HCELLSDCPPGTEAELKDEVGKGNNHCVPCKAGHFQNTSSPSARCQPHTRCENQGLVEAA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 KGNATHDNICSGNSEST--QKCG---IDVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGT
:.: :. :.. : . : . ..: ::: . . : :. : :
CCDS59 PGTAQSDTTCKNPLEPLPPEMSGTMLMLAVLLPLAFF-LLLATVFSCIWKSHPSLCRKLG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 KVNAESVERIKRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGHANL
CCDS59 SLLKRRPQGEGPNPVAGSWEPPKAHPYFPDLVQPLLPISGDVSPVSTGLPAAPVLEAGVP
250 260 270 280 290 300
401 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:20:34 2016 done: Sat Nov 5 04:20:35 2016
Total Scan time: 2.660 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]