Result of FASTA (ccds) for
pF1KB6565
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6565, 374 aa
1>>>pF1KB6565 374 - 374 aa - 374 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3493+/-0.000866; mu= 16.6048+/- 0.052
mean_var=75.1343+/-15.174, 0's: 0 Z-trim(107.8): 77 B-trim: 232 in 1/49
Lambda= 0.147964
statistics sampled from 9690 (9778) to 9690 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.68), E-opt: 0.2 (0.3), width: 16
Scan time: 2.750
The best scores are: opt bits E(32554)
CCDS5318.1 ADAP1 gene_id:11033|Hs108|chr7 ( 374) 2606 565.6 2.4e-161
CCDS64577.1 ADAP1 gene_id:11033|Hs108|chr7 ( 385) 2421 526.2 1.9e-149
CCDS64576.1 ADAP1 gene_id:11033|Hs108|chr7 ( 302) 2102 458.0 5e-129
CCDS75558.1 ADAP1 gene_id:11033|Hs108|chr7 ( 279) 1891 412.9 1.7e-115
CCDS11261.1 ADAP2 gene_id:55803|Hs108|chr17 ( 381) 1570 344.5 9.2e-95
CCDS64802.1 AGAP3 gene_id:116988|Hs108|chr7 ( 580) 340 82.1 1.4e-15
CCDS43681.1 AGAP3 gene_id:116988|Hs108|chr7 ( 911) 340 82.2 2e-15
CCDS11101.1 ACAP1 gene_id:9744|Hs108|chr17 ( 740) 334 80.9 4.1e-15
CCDS451.1 SMAP2 gene_id:64744|Hs108|chr1 ( 429) 331 80.1 4.2e-15
CCDS64459.1 SMAP1 gene_id:60682|Hs108|chr6 ( 436) 326 79.0 8.9e-15
CCDS4973.1 SMAP1 gene_id:60682|Hs108|chr6 ( 440) 326 79.0 8.9e-15
CCDS43478.1 SMAP1 gene_id:60682|Hs108|chr6 ( 467) 326 79.0 9.3e-15
CCDS19.2 ACAP3 gene_id:116983|Hs108|chr1 ( 834) 328 79.6 1.1e-14
CCDS8951.1 AGAP2 gene_id:116986|Hs108|chr12 ( 836) 326 79.2 1.5e-14
CCDS44932.1 AGAP2 gene_id:116986|Hs108|chr12 (1192) 326 79.3 2e-14
CCDS33924.1 ACAP2 gene_id:23527|Hs108|chr3 ( 778) 313 76.4 9.6e-14
CCDS7215.1 AGAP4 gene_id:119016|Hs108|chr10 ( 663) 303 74.2 3.7e-13
CCDS2514.1 AGAP1 gene_id:116987|Hs108|chr2 ( 804) 304 74.5 3.7e-13
CCDS33408.1 AGAP1 gene_id:116987|Hs108|chr2 ( 857) 304 74.5 3.9e-13
CCDS44397.1 AGAP6 gene_id:414189|Hs108|chr10 ( 686) 301 73.8 5.1e-13
CCDS73125.1 AGAP9 gene_id:642517|Hs108|chr10 ( 658) 290 71.4 2.5e-12
CCDS75788.1 ASAP1 gene_id:50807|Hs108|chr8 (1122) 291 71.8 3.3e-12
CCDS6362.1 ASAP1 gene_id:50807|Hs108|chr8 (1129) 291 71.8 3.3e-12
CCDS44439.1 AGAP5 gene_id:729092|Hs108|chr10 ( 686) 284 70.2 6.3e-12
CCDS55592.1 SMAP2 gene_id:64744|Hs108|chr1 ( 399) 274 67.9 1.8e-11
CCDS72763.1 SMAP2 gene_id:64744|Hs108|chr1 ( 424) 274 67.9 1.9e-11
CCDS75478.1 SMAP1 gene_id:60682|Hs108|chr6 ( 457) 269 66.8 4.2e-11
CCDS44087.1 ASAP3 gene_id:55616|Hs108|chr1 ( 894) 272 67.7 4.6e-11
CCDS235.1 ASAP3 gene_id:55616|Hs108|chr1 ( 903) 272 67.7 4.6e-11
>>CCDS5318.1 ADAP1 gene_id:11033|Hs108|chr7 (374 aa)
initn: 2606 init1: 2606 opt: 2606 Z-score: 3010.1 bits: 565.6 E(32554): 2.4e-161
Smith-Waterman score: 2606; 99.7% identity (100.0% similar) in 374 aa overlap (1-374:1-374)
10 20 30 40 50 60
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML
310 320 330 340 350 360
370
pF1KB6 PQEYAVEAHFKHKP
::::::::::::::
CCDS53 PQEYAVEAHFKHKP
370
>>CCDS64577.1 ADAP1 gene_id:11033|Hs108|chr7 (385 aa)
initn: 2417 init1: 2417 opt: 2421 Z-score: 2796.5 bits: 526.2 E(32554): 1.9e-149
Smith-Waterman score: 2421; 97.5% identity (98.0% similar) in 358 aa overlap (21-374:28-385)
10 20 30 40
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAP----DPDWASYTLGVFICLSCSGIHR
::. : ::::::::::::::::::::::
CCDS64 MFQFVFSRVYCINPARRKWKEFEKMLGCAEEGHASLGRDPDWASYTLGVFICLSCSGIHR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 NIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 NIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 RAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 RAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 EPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 EPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 FHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 FHYLQVAFPGAGDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 DAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 DAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVA
310 320 330 340 350 360
350 360 370
pF1KB6 AFQKAVDRPMLPQEYAVEAHFKHKP
:::::::::::::::::::::::::
CCDS64 AFQKAVDRPMLPQEYAVEAHFKHKP
370 380
>>CCDS64576.1 ADAP1 gene_id:11033|Hs108|chr7 (302 aa)
initn: 2102 init1: 2102 opt: 2102 Z-score: 2430.0 bits: 458.0 E(32554): 5e-129
Smith-Waterman score: 2102; 99.7% identity (100.0% similar) in 302 aa overlap (73-374:1-302)
50 60 70 80 90 100
pF1KB6 SCSGIHRNIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQ
::::::::::::::::::::::::::::::
CCDS64 MASHGNDAARARFESKVPSFYYRPTPSDCQ
10 20 30
110 120 130 140 150 160
pF1KB6 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB6 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB6 NALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRL
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS64 NALRAARFHYLQVAFPGAGDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRL
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB6 MYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 MYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETES
220 230 240 250 260 270
350 360 370
pF1KB6 DQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP
::::::::::::::::::::::::::::::::
CCDS64 DQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP
280 290 300
>>CCDS75558.1 ADAP1 gene_id:11033|Hs108|chr7 (279 aa)
initn: 1891 init1: 1891 opt: 1891 Z-score: 2187.1 bits: 412.9 E(32554): 1.7e-115
Smith-Waterman score: 1891; 99.3% identity (100.0% similar) in 273 aa overlap (102-374:7-279)
80 90 100 110 120 130
pF1KB6 FMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGY
.:::::::::::::::::::::::::::::
CCDS75 MVLASLELLREQWIRAKYERQEFIYPEKQEPYSAGY
10 20 30
140 150 160 170 180 190
pF1KB6 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGH
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 PHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSR
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
CCDS75 PHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGAGDADLVPKLSR
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB6 NYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 NYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHG
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB6 FPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPMLPQEYAVEAHFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 FPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPMLPQEYAVEAHFK
220 230 240 250 260 270
pF1KB6 HKP
:::
CCDS75 HKP
>>CCDS11261.1 ADAP2 gene_id:55803|Hs108|chr17 (381 aa)
initn: 1544 init1: 740 opt: 1570 Z-score: 1814.8 bits: 344.5 E(32554): 9.2e-95
Smith-Waterman score: 1570; 58.8% identity (84.1% similar) in 364 aa overlap (3-361:4-366)
10 20 30 40 50
pF1KB6 MAKER-RRAVLELLQRP--GNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSK
.:: .. .::::. : :::.:::::: ::::::: ::.::::.: :.:::.:..:.
CCDS11 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNFPDISR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 VKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQ
::::::: :... :::: .:: ..:.::..::.::: : .:: .:.::::::::::.
CCDS11 VKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 EFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMK
::. . . : ::::::::::::.::: ::::: ::: ::::.....: ::::..
CCDS11 EFM-ADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVIS
130 140 150 160 170
180 190 200 210 220 230
pF1KB6 IEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVA
:. :::::: :::::::::.:: .:. :::.:.:::.:::::::::::::::..::..:
CCDS11 IKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 FPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMD--DRRLMYFKDPLDAFAR
:: ...::: :.:::::.:.:::::::: : :.::::..: .:::.:.:.::::: .
CCDS11 FPELPESELVPFLTRNYLKQGFMEKTGPKQKEPFKKRWFALDCHERRLLYYKNPLDAFEQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB6 GEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKA
:.::.:.::.:: . . .: . .:..: :.:::::.:.:...: .:..:.::. ... .
CCDS11 GQVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPSEKEQQEWLESLRGV
300 310 320 330 340 350
360 370
pF1KB6 VDRPMLPQEYAVEAHFKHKP
.. :. :
CCDS11 LSSPLTPLNRLTASTESGRSSR
360 370 380
>>CCDS64802.1 AGAP3 gene_id:116988|Hs108|chr7 (580 aa)
initn: 236 init1: 236 opt: 340 Z-score: 393.2 bits: 82.1 E(32554): 1.4e-15
Smith-Waterman score: 340; 43.4% identity (71.7% similar) in 106 aa overlap (17-121:342-446)
10 20 30 40
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
::. : :: ::.::::: .::...:. :::
CCDS64 SLQGCRSAKDKTRLGNQNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSG
320 330 340 350 360 370
50 60 70 80 90 100
pF1KB6 IHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLR
:::.. ..:.:.:. :: : . :.. :: : . .:. . . : .: :. :. .
CCDS64 IHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALGG-YSKPGPDACREEK
380 390 400 410 420 430
110 120 130 140 150 160
pF1KB6 EQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNR
:.:::::::.. :. :
CCDS64 ERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGD
440 450 460 470 480 490
>>CCDS43681.1 AGAP3 gene_id:116988|Hs108|chr7 (911 aa)
initn: 236 init1: 236 opt: 340 Z-score: 390.4 bits: 82.2 E(32554): 2e-15
Smith-Waterman score: 340; 43.4% identity (71.7% similar) in 106 aa overlap (17-121:673-777)
10 20 30 40
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
::. : :: ::.::::: .::...:. :::
CCDS43 SLQGCRSAKDKTRLGNQNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSG
650 660 670 680 690 700
50 60 70 80 90 100
pF1KB6 IHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLR
:::.. ..:.:.:. :: : . :.. :: : . .:. . . : .: :. :. .
CCDS43 IHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALGG-YSKPGPDACREEK
710 720 730 740 750 760
110 120 130 140 150 160
pF1KB6 EQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNR
:.:::::::.. :. :
CCDS43 ERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGD
770 780 790 800 810 820
>>CCDS11101.1 ACAP1 gene_id:9744|Hs108|chr17 (740 aa)
initn: 292 init1: 178 opt: 334 Z-score: 384.8 bits: 80.9 E(32554): 4.1e-15
Smith-Waterman score: 347; 36.8% identity (58.2% similar) in 182 aa overlap (17-195:416-585)
10 20 30 40
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
:::.: :: : :.::: .::: .:..:::
CCDS11 SAATLGSGGMARGREPGGVGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSG
390 400 410 420 430 440
50 60 70 80 90 100
pF1KB6 IHRNIP-QVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYR-PTPSDCQLL
:::.. . :::.:. ::.:: :..: :: .:..: .. . : :: .
CCDS11 IHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVEAMAVKKPGPSCSRQE
450 460 470 480 490 500
110 120 130 140 150 160
pF1KB6 REQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQF-LSRKFVLTEREGALKYF
.: ::.::: ...:. . : : : : ::: :: . : . : :.:
CCDS11 KEAWIHAKYVEKKFL---TKLPEIRGRRGG----RGRPRGQPPVPPKPSIRPRPGSL---
510 520 530 540 550
170 180 190 200 210 220
pF1KB6 NRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFN
:. . :. . : .: . :. ::: .:
CCDS11 -RSKPEPPSEDLGSLHPGALLFRAS-GHPPSLPTMADALAHGADVNWVNGGQDNATPLIQ
560 570 580 590 600 610
230 240 250 260 270 280
pF1KB6 ALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLM
CCDS11 ATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEG
620 630 640 650 660 670
>>CCDS451.1 SMAP2 gene_id:64744|Hs108|chr1 (429 aa)
initn: 336 init1: 175 opt: 331 Z-score: 384.7 bits: 80.1 E(32554): 4.2e-15
Smith-Waterman score: 331; 38.7% identity (62.7% similar) in 142 aa overlap (4-142:10-146)
10 20 30 40 50
pF1KB6 MAKERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-
.: .::: .:: . : :::: . : :::...:::::. :.:::::.
CCDS45 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 QVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAK
..:.:::: :: : . :.. : :: : .:. .: . :: . : .:: :
CCDS45 HISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAV---EGFIRDK
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 YERQEFIYPEKQEPYSAGYRE-GFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEP
::..... ... .: .: :::: .
CCDS45 YEKKKYM--DRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 KAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFH
CCDS45 SSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTA
180 190 200 210 220 230
>>CCDS64459.1 SMAP1 gene_id:60682|Hs108|chr6 (436 aa)
initn: 329 init1: 184 opt: 326 Z-score: 378.8 bits: 79.0 E(32554): 8.9e-15
Smith-Waterman score: 326; 42.7% identity (69.2% similar) in 117 aa overlap (4-118:15-128)
10 20 30 40
pF1KB6 MAKERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIH
:... .: .::.. : :::: : : :::...:::::. :.:::
CCDS64 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 RNIP-QVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQ
::. ..:.:::: :: : :.. : . :: :: .:...: . :: .: . :
CCDS64 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQ-TDQAV--EF
70 80 90 100 110
110 120 130 140 150 160
pF1KB6 WIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRND
.:: :::....
CCDS64 FIRDKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKK
120 130 140 150 160 170
374 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 20:42:24 2016 done: Sat Nov 5 20:42:25 2016
Total Scan time: 2.750 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]