Result of FASTA (ccds) for
pF1KB6561
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6561, 374 aa
1>>>pF1KB6561 374 - 374 aa - 374 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5737+/-0.000844; mu= 10.5703+/- 0.051
mean_var=98.1604+/-20.234, 0's: 0 Z-trim(108.3): 70 B-trim: 2 in 1/53
Lambda= 0.129451
statistics sampled from 10083 (10153) to 10083 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.312), width: 16
Scan time: 2.520
The best scores are: opt bits E(32554)
CCDS933.1 FCGR1A gene_id:2209|Hs108|chr1 ( 374) 2507 478.6 3.9e-135
CCDS72844.1 FCGR1B gene_id:2210|Hs108|chr1 ( 224) 1481 286.8 1.2e-77
CCDS72845.1 FCGR1B gene_id:2210|Hs108|chr1 ( 280) 1263 246.2 2.7e-65
CCDS30927.1 FCRLB gene_id:127943|Hs108|chr1 ( 426) 654 132.5 6.6e-31
CCDS72846.1 FCGR1B gene_id:2210|Hs108|chr1 ( 188) 640 129.7 2e-30
CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1 ( 233) 586 119.7 2.6e-27
CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1 ( 269) 586 119.7 3e-27
CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1 ( 254) 578 118.2 8e-27
CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1 ( 290) 578 118.3 8.9e-27
CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1 ( 316) 575 117.7 1.4e-26
CCDS72961.1 FCGR3B gene_id:2215|Hs108|chr1 ( 216) 572 117.1 1.5e-26
CCDS1165.1 FCRL5 gene_id:83416|Hs108|chr1 ( 977) 575 118.0 3.7e-26
CCDS53414.1 FCGR2B gene_id:2213|Hs108|chr1 ( 303) 565 115.8 5e-26
CCDS30924.1 FCGR2B gene_id:2213|Hs108|chr1 ( 310) 565 115.8 5.1e-26
CCDS44264.1 FCGR2A gene_id:2212|Hs108|chr1 ( 317) 564 115.7 5.9e-26
CCDS30925.1 FCGR2B gene_id:2213|Hs108|chr1 ( 291) 559 114.7 1e-25
CCDS1166.1 FCRL4 gene_id:83417|Hs108|chr1 ( 515) 553 113.7 3.7e-25
CCDS30926.1 FCRLA gene_id:84824|Hs108|chr1 ( 376) 515 106.5 3.9e-23
CCDS53415.1 FCRLA gene_id:84824|Hs108|chr1 ( 382) 515 106.5 3.9e-23
CCDS1167.1 FCRL3 gene_id:115352|Hs108|chr1 ( 734) 508 105.4 1.7e-22
CCDS81385.1 FCRL3 gene_id:115352|Hs108|chr1 ( 742) 508 105.4 1.7e-22
CCDS1184.1 FCER1A gene_id:2205|Hs108|chr1 ( 257) 501 103.8 1.7e-22
CCDS72962.1 FCRLB gene_id:127943|Hs108|chr1 ( 275) 481 100.1 2.4e-21
CCDS72963.1 FCRLB gene_id:127943|Hs108|chr1 ( 318) 479 99.8 3.6e-21
CCDS72964.1 FCRLB gene_id:127943|Hs108|chr1 ( 268) 443 93.0 3.2e-19
CCDS60312.1 FCRL6 gene_id:343413|Hs108|chr1 ( 413) 445 93.5 3.6e-19
CCDS30912.1 FCRL6 gene_id:343413|Hs108|chr1 ( 434) 445 93.5 3.8e-19
CCDS72965.1 FCRLB gene_id:127943|Hs108|chr1 ( 311) 441 92.7 4.8e-19
CCDS53419.1 FCRLA gene_id:84824|Hs108|chr1 ( 236) 331 72.1 5.8e-13
CCDS1168.1 FCRL2 gene_id:79368|Hs108|chr1 ( 508) 335 73.0 6.6e-13
CCDS53416.1 FCRLA gene_id:84824|Hs108|chr1 ( 242) 323 70.6 1.7e-12
CCDS53417.1 FCRLA gene_id:84824|Hs108|chr1 ( 287) 323 70.6 1.9e-12
CCDS72960.1 FCGR3B gene_id:2215|Hs108|chr1 ( 130) 312 68.4 4.1e-12
>>CCDS933.1 FCGR1A gene_id:2209|Hs108|chr1 (374 aa)
initn: 2507 init1: 2507 opt: 2507 Z-score: 2539.5 bits: 478.6 E(32554): 3.9e-135
Smith-Waterman score: 2507; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374)
10 20 30 40 50 60
pF1KB6 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 TSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAVG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 IMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 IMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQ
310 320 330 340 350 360
370
pF1KB6 LQEGVHRKEPQGAT
::::::::::::::
CCDS93 LQEGVHRKEPQGAT
370
>>CCDS72844.1 FCGR1B gene_id:2210|Hs108|chr1 (224 aa)
initn: 1480 init1: 1244 opt: 1481 Z-score: 1507.3 bits: 286.8 E(32554): 1.2e-77
Smith-Waterman score: 1481; 98.2% identity (98.7% similar) in 224 aa overlap (1-223:1-224)
10 20 30 40 50 60
pF1KB6 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS72 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETITLHCEVLHLPGSSSTQWFLNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPL
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
CCDS72 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFMEGEPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 IS-VTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR
:: ::::::::::::::::::::::::::::::::::::::::
CCDS72 ISQYTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGL
190 200 210 220
240 250 260 270 280 290
pF1KB6 NTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAV
>>CCDS72845.1 FCGR1B gene_id:2210|Hs108|chr1 (280 aa)
initn: 1848 init1: 1244 opt: 1263 Z-score: 1285.8 bits: 246.2 E(32554): 2.7e-65
Smith-Waterman score: 1664; 73.0% identity (73.8% similar) in 374 aa overlap (1-374:1-280)
10 20 30 40 50 60
pF1KB6 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS72 MWFLTTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETITLHCEVLHLPGSSSTQWFLNG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPL
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
CCDS72 TATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFMEGEPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRN
::
CCDS72 IS----------------------------------------------------------
250 260 270 280 290 300
pF1KB6 TSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAVG
. : :::::::::::::::::::
CCDS72 ------------------------------------QYTVKGLQLPTPVWFHVLFYLAVG
190 200
310 320 330 340 350 360
pF1KB6 IMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQ
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
CCDS72 IMFLVNTVLWVTIRKELKRKKKWNLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQ
210 220 230 240 250 260
370
pF1KB6 LQEGVHRKEPQGAT
::::::::::::::
CCDS72 LQEGVHRKEPQGAT
270 280
>>CCDS30927.1 FCRLB gene_id:127943|Hs108|chr1 (426 aa)
initn: 490 init1: 327 opt: 654 Z-score: 668.3 bits: 132.5 E(32554): 6.6e-31
Smith-Waterman score: 654; 40.5% identity (62.5% similar) in 291 aa overlap (1-278:1-285)
10 20 30 40 50
pF1KB6 MWFLTTLLLWVPVDGQVDTT-KAVITLQPPWVSVFQEETVTLHCEVLHLP-----GSSST
:: ::.::: :: .::. : : ...:.:::...:. : :::.:. : : ::
CCDS30 MWPLTALLLLVPSSGQAATLEKPILSLHPPWTTIFKGERVTLKCDGYH-PLLLELQPIST
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 QWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVF
:.:. . ::.. : :. : :::: . ::::.: . ::.:::
CCDS30 LWYLG----HLLLPSHK-KSIEVQTPGVYRCQTRGAPVSDPIHLSVSNDWLILQVPYAPV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 TEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGK-
:::::.:::..: ::.::.. ::..:.: ..:: ..: :.:.. : .: :.::: .
CCDS30 FEGEPLVLRCRGWYDKVVYKLHYYHDGQAVRYFHSSANYTVLQARASDSGRYQCSGTMRI
120 130 140 150 160 170
180 190 200 210 220
pF1KB6 ----HRYTSAGISVTVKELFPAPVLNASVTSPLLEGNL--VTLSCETKLLLQRPGLQLYF
. :: ..:::.::: :::: . . : :.: :.:.: :. : :
CCDS30 PVESAPMFSAKVAVTVQELFRAPVLRVMGPREARGAALGGVVLRCDTRLHPQKRDTPLQF
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 SFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPT
.:: :...: . ..:: . . :. ::::::: .: :::: :.:
CCDS30 AFYKYSRAVRRFDWGAEYTVPEPEVEELESYWCEAATATRSVRKRSPWLQLPGPGSPLDP
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB6 PVWFHVLFYLAVGIMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHL
CCDS30 ASTTAPAPWAAALAPGNRPLSFRKPPVSRSVPLVTSVRNTTSTGLQFPASGAPTAGPPAC
300 310 320 330 340 350
>>CCDS72846.1 FCGR1B gene_id:2210|Hs108|chr1 (188 aa)
initn: 1218 init1: 618 opt: 640 Z-score: 659.6 bits: 129.7 E(32554): 2e-30
Smith-Waterman score: 973; 63.2% identity (64.0% similar) in 272 aa overlap (103-374:11-188)
80 90 100 110 120 130
pF1KB6 TSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLV
:::::::::::: :::::::::::::::::
CCDS72 MWFLTTLLLWGWLLLQVSSRVFMEGEPLALRCHAWKDKLV
10 20 30 40
140 150 160 170 180 190
pF1KB6 YNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAP
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 YNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGIS----------
50 60 70 80 90
200 210 220 230 240 250
pF1KB6 VLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARR
CCDS72 ------------------------------------------------------------
260 270 280 290 300 310
pF1KB6 EDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLFYLAVGIMFLVNTVLWVT
. : :::::::::::::::::::::::::::::::
CCDS72 ------------------------QYTVKGLQLPTPVWFHVLFYLAVGIMFLVNTVLWVT
100 110 120
320 330 340 350 360 370
pF1KB6 IRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQLQEGVHRKEPQG
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 IRKELKRKKKWNLEISLDSGHEKKVISSLQEDRHLEEELKCQEQKEEQLQEGVHRKEPQG
130 140 150 160 170 180
pF1KB6 AT
::
CCDS72 AT
>>CCDS41433.1 FCGR3B gene_id:2215|Hs108|chr1 (233 aa)
initn: 563 init1: 538 opt: 586 Z-score: 603.7 bits: 119.7 E(32554): 2.6e-27
Smith-Waterman score: 586; 41.6% identity (68.7% similar) in 233 aa overlap (1-228:1-228)
10 20 30 40 50
pF1KB6 MWFL---TTLLLWVPVDGQV-DTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQW
:: : :.::: : . .. : :::. :.: : ::.....:::.:. . : ..::::
CCDS41 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQW
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 FLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTE
: : . .... :: : .:.:::::::::: .:: :::.:::.: ::::::. :: :
CCDS41 FHNENLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 GEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGM-GKHR
.:. ::::.::. ...: : .::: :.:: ::.. : :.... .:.: : :. :..
CCDS41 EDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 YTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKT
.: ...:. . . . ... : . : : :.. : . .:: ::::
CCDS41 VSSETVNITITQGLAVSTIS-SFSPP---GYQVSF-CLVMVLLFAVDTGLYFSVKTNI
190 200 210 220 230
240 250 260 270 280 290
pF1KB6 LRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLF
>>CCDS58040.1 FCGR3B gene_id:2215|Hs108|chr1 (269 aa)
initn: 538 init1: 538 opt: 586 Z-score: 602.8 bits: 119.7 E(32554): 3e-27
Smith-Waterman score: 586; 41.6% identity (68.7% similar) in 233 aa overlap (1-228:37-264)
10 20
pF1KB6 MWFL---TTLLLWVPVDGQV-DTTKAVITL
:: : :.::: : . .. : :::. :
CCDS58 ERLFTPSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLPKAVVFL
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB6 QPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQ
.: : ::.....:::.:. . : ..::::: : . .... :: : .:.::::::::::
CCDS58 EPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNENLISSQASSYFIDAATVNDSGEYRCQ
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB6 RGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF
.:: :::.:::.: ::::::. :: : .:. ::::.::. ...: : .::: :.
CCDS58 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKY
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB6 FHWNSNLTILKTNISHNGTYHCSGM-GKHRYTSAGISVTVKELFPAPVLNASVTSPLLEG
:: ::.. : :.... .:.: : :. :.. .: ...:. . . . ... : . : :
CCDS58 FHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQGLAVSTIS-SFSPP---G
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB6 NLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATE
:.. : . .:: ::::
CCDS58 YQVSF-CLVMVLLFAVDTGLYFSVKTNI
250 260
>>CCDS44266.1 FCGR3A gene_id:2214|Hs108|chr1 (254 aa)
initn: 556 init1: 531 opt: 578 Z-score: 595.1 bits: 118.2 E(32554): 8e-27
Smith-Waterman score: 578; 40.3% identity (68.7% similar) in 233 aa overlap (1-228:1-228)
10 20 30 40 50
pF1KB6 MWFL---TTLLLWVPVDGQV-DTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQW
:: : :.::: : . .. : :::. :.: : :.....:::.:. . : ..::::
CCDS44 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 FLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTE
: : . .... :: : .:.:.:::::::: .:: :::.:::.: ::::::. :: :
CCDS44 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 GEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGM-GKHR
.:. ::::.::. ...: : .:::. :.:: ::.. : :.... .:.: : :. :..
CCDS44 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 YTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKT
.: ...:. . . . ....: . : :.. : . .:: ::::
CCDS44 VSSETVNITITQGLAV----STISSFFPPGYQVSF-CLVMVLLFAVDTGLYFSVKTNIRS
190 200 210 220 230
240 250 260 270 280 290
pF1KB6 LRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPTPVWFHVLF
CCDS44 STRDWKDHKFKWRKDPQDK
240 250
>>CCDS1232.1 FCGR3A gene_id:2214|Hs108|chr1 (290 aa)
initn: 531 init1: 531 opt: 578 Z-score: 594.2 bits: 118.3 E(32554): 8.9e-27
Smith-Waterman score: 578; 40.3% identity (68.7% similar) in 233 aa overlap (1-228:37-264)
10 20
pF1KB6 MWFL---TTLLLWVPVDGQV-DTTKAVITL
:: : :.::: : . .. : :::. :
CCDS12 ERLFTSSCLVGLVPLGLRISLVTCPLQCGIMWQLLLPTALLLLVSAGMRTEDLPKAVVFL
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB6 QPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQ
.: : :.....:::.:. . : ..::::: : . .... :: : .:.:.::::::::
CCDS12 EPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQ
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB6 RGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKF
.:: :::.:::.: ::::::. :: : .:. ::::.::. ...: : .:::. :.
CCDS12 TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB6 FHWNSNLTILKTNISHNGTYHCSGM-GKHRYTSAGISVTVKELFPAPVLNASVTSPLLEG
:: ::.. : :.... .:.: : :. :.. .: ...:. . . . ....: . :
CCDS12 FHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLAV----STISSFFPPG
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB6 NLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATE
:.. : . .:: ::::
CCDS12 YQVSF-CLVMVLLFAVDTGLYFSVKTNIRSSTRDWKDHKFKWRKDPQDK
250 260 270 280 290
>>CCDS30922.1 FCGR2A gene_id:2212|Hs108|chr1 (316 aa)
initn: 531 init1: 531 opt: 575 Z-score: 590.6 bits: 117.7 E(32554): 1.4e-26
Smith-Waterman score: 575; 43.5% identity (70.5% similar) in 207 aa overlap (1-202:16-215)
10 20 30 40
pF1KB6 MWFL---TTLLLWVPVDGQVDTTKAVITLQPPWVSVFQEETVTLH
.:.: :.::: . .:.:. :::. :.:::..:.::..:::
CCDS30 MTMETQMSQNVCPRNLWLLQPLTVLLLLASADSQAAPPKAVLKLEPPWINVLQEDSVTLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 CEVLHLPGSSSTQWFLNGTATQTST-PSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIH
:. . : :.: ::: ::. : : ::::. .:. :::::: :: : .. :::..: .
CCDS30 CQGARSPESDSIQWFHNGNLIPTHTQPSYRF-KANNNDSGEYTCQTGQTSLSDPVHLTVL
70 80 90 100 110
110 120 130 140 150 160
pF1KB6 RGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNIS
::.::. : ::: . ::::.:::: . .: ...:::. :: : . ...: ..: :
CCDS30 SEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 HNGTYHCSG-MGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQR
:.: :::.: .: ..: ...::. .: ...: ::.
CCDS30 HSGDYHCTGNIGYTLFSSKPVTITVQ----VPSMGSS--SPMGIIVAVVIATAVAAIVAA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 PGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQV
CCDS30 VVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQLEETNNDYETADGGYMTLNPR
240 250 260 270 280 290
374 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:27:52 2016 done: Sat Nov 5 11:27:53 2016
Total Scan time: 2.520 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]