Result of FASTA (omim) for
pF1KB6560
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6560, 342 aa
1>>>pF1KB6560 342 - 342 aa - 342 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3577+/-0.00033; mu= 7.0379+/- 0.021
mean_var=136.1637+/-27.380, 0's: 0 Z-trim(118.9): 197 B-trim: 45 in 1/55
Lambda= 0.109912
statistics sampled from 32192 (32415) to 32192 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.38), width: 16
Scan time: 8.780
The best scores are: opt bits E(85289)
NP_001074239 (OMIM: 604945) killer cell immunoglob ( 342) 2369 386.8 3.7e-107
NP_001074241 (OMIM: 604945) killer cell immunoglob ( 273) 1666 275.3 1.1e-73
NP_002246 (OMIM: 604945) killer cell immunoglobuli ( 377) 1666 275.3 1.4e-73
NP_065396 (OMIM: 605305) killer cell immunoglobuli ( 375) 1298 217.0 5.2e-56
XP_016885757 (OMIM: 615727) PREDICTED: killer cell ( 375) 1292 216.0 1e-55
XP_016885761 (OMIM: 615727) PREDICTED: killer cell ( 375) 1284 214.8 2.4e-55
XP_016885731 (OMIM: 615727) PREDICTED: killer cell ( 375) 1284 214.8 2.4e-55
NP_001018091 (OMIM: 615727) killer cell immunoglob ( 375) 1280 214.1 3.8e-55
XP_016885768 (OMIM: 615727) PREDICTED: killer cell ( 386) 1262 211.3 2.8e-54
XP_011525242 (OMIM: 604947) PREDICTED: killer cell ( 420) 1232 206.6 8.1e-53
XP_016885766 (OMIM: 615727) PREDICTED: killer cell ( 363) 1215 203.8 4.7e-52
XP_016885767 (OMIM: 604956) PREDICTED: LOW QUALITY ( 375) 1213 203.5 6e-52
NP_036446 (OMIM: 604955) killer cell immunoglobuli ( 304) 945 161.0 3.1e-39
XP_016882272 (OMIM: 604936) PREDICTED: killer cell ( 253) 927 158.1 1.9e-38
XP_016885735 (OMIM: 604937) PREDICTED: killer cell ( 374) 915 156.3 1e-37
XP_016885759 (OMIM: 604937) PREDICTED: killer cell ( 374) 915 156.3 1e-37
NP_036444 (OMIM: 604953) killer cell immunoglobuli ( 304) 913 155.9 1.1e-37
XP_016885764 (OMIM: 604953) PREDICTED: killer cell ( 304) 913 155.9 1.1e-37
NP_001278624 (OMIM: 604953) killer cell immunoglob ( 338) 913 155.9 1.1e-37
XP_016885734 (OMIM: 604937) PREDICTED: killer cell ( 348) 913 155.9 1.2e-37
XP_016885758 (OMIM: 604937) PREDICTED: killer cell ( 348) 913 155.9 1.2e-37
NP_055034 (OMIM: 604937) killer cell immunoglobuli ( 348) 913 155.9 1.2e-37
NP_055033 (OMIM: 604936) killer cell immunoglobuli ( 348) 911 155.6 1.5e-37
NP_056952 (OMIM: 604938) killer cell immunoglobuli ( 341) 903 154.3 3.5e-37
NP_055327 (OMIM: 604952) killer cell immunoglobuli ( 304) 894 152.9 8.5e-37
XP_016885782 (OMIM: 604936) PREDICTED: killer cell ( 330) 890 152.3 1.4e-36
XP_011546672 (OMIM: 604936) PREDICTED: killer cell ( 304) 888 151.9 1.6e-36
NP_036445 (OMIM: 604954) killer cell immunoglobuli ( 304) 886 151.6 2e-36
XP_016885760 (OMIM: 604954) PREDICTED: LOW QUALITY ( 360) 886 151.6 2.3e-36
XP_016885770 (OMIM: 604956) PREDICTED: killer cell ( 304) 883 151.1 2.8e-36
XP_016885769 (OMIM: 604956) PREDICTED: killer cell ( 304) 882 151.0 3.2e-36
NP_703144 (OMIM: 610095) killer cell immunoglobuli ( 410) 877 150.3 7e-36
NP_055328 (OMIM: 604956) killer cell immunoglobuli ( 304) 867 148.6 1.7e-35
XP_016885763 (OMIM: 604946,609423) PREDICTED: kill ( 397) 849 145.8 1.5e-34
XP_016882273 (OMIM: 604947) PREDICTED: killer cell ( 342) 845 145.1 2e-34
NP_001229796 (OMIM: 604947) killer cell immunoglob ( 438) 846 145.4 2.2e-34
NP_006728 (OMIM: 604947) killer cell immunoglobuli ( 455) 845 145.2 2.6e-34
NP_001278630 (OMIM: 604953) killer cell immunoglob ( 287) 828 142.4 1.1e-33
NP_001309097 (OMIM: 604946,609423) killer cell imm ( 444) 830 142.8 1.3e-33
NP_037421 (OMIM: 604946,609423) killer cell immuno ( 444) 830 142.8 1.3e-33
XP_011525241 (OMIM: 604936) PREDICTED: killer cell ( 235) 801 138.1 1.9e-32
XP_016885732 (OMIM: 604954) PREDICTED: LOW QUALITY ( 454) 804 138.7 2.3e-32
XP_016882271 (OMIM: 604936) PREDICTED: killer cell ( 295) 799 137.8 2.8e-32
XP_011546673 (OMIM: 604936) PREDICTED: killer cell ( 235) 783 135.2 1.4e-31
XP_016885733 (OMIM: 604956) PREDICTED: LOW QUALITY ( 541) 786 135.9 1.9e-31
XP_016885771 (OMIM: 604956) PREDICTED: LOW QUALITY ( 541) 786 135.9 1.9e-31
XP_016885756 (OMIM: 604956) PREDICTED: LOW QUALITY ( 541) 786 135.9 1.9e-31
XP_016885783 (OMIM: 604936) PREDICTED: killer cell ( 277) 778 134.4 2.7e-31
NP_001278625 (OMIM: 604953) killer cell immunoglob ( 204) 655 114.9 1.6e-25
XP_011524692 (OMIM: 604812) PREDICTED: leukocyte i ( 366) 516 93.0 1.1e-18
>>NP_001074239 (OMIM: 604945) killer cell immunoglobulin (342 aa)
initn: 2369 init1: 2369 opt: 2369 Z-score: 2044.9 bits: 386.8 E(85289): 3.7e-107
Smith-Waterman score: 2369; 99.4% identity (99.7% similar) in 342 aa overlap (1-342:1-342)
10 20 30 40 50 60
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 GLYEKPSLTARPGPTVRAGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEPSFKTDAAVM
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_001 DFPLGPATHGETYRCFGSFHGSPYEWSDPSDPLPVSVTGNPSSSWPSPTEPSFKTDAAVM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 NQEPAGHRTVNREDSDEQDPQEVTYAQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQEPAGHRTVNREDSDEQDPQEVTYAQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPN
250 260 270 280 290 300
310 320 330 340
pF1KB6 AEPRALSPAHEHHSQALMGSSRETTALSQTQLASSNVPAAGI
::::::::::::::::::::::::::::::::::::::::::
NP_001 AEPRALSPAHEHHSQALMGSSRETTALSQTQLASSNVPAAGI
310 320 330 340
>>NP_001074241 (OMIM: 604945) killer cell immunoglobulin (273 aa)
initn: 1775 init1: 1666 opt: 1666 Z-score: 1443.9 bits: 275.3 E(85289): 1.1e-73
Smith-Waterman score: 1666; 98.3% identity (98.7% similar) in 238 aa overlap (1-238:1-238)
10 20 30 40 50 60
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 GLYEKPSLTARPGPTVRAGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 DFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEPSFKTDAAVM
:::::::::::::::::::::::::::: :::::::::::::::::::::::::: :
NP_001 DFPLGPATHGETYRCFGSFHGSPYEWSDPSDPLPVSVTGNPSSSWPSPTEPSFKTGIARH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 NQEPAGHRTVNREDSDEQDPQEVTYAQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPN
NP_001 LHAVIRYSVAIILFTILPFFLLHRWCSKKKMLL
250 260 270
>>NP_002246 (OMIM: 604945) killer cell immunoglobulin-li (377 aa)
initn: 1775 init1: 1666 opt: 1666 Z-score: 1441.8 bits: 275.3 E(85289): 1.4e-73
Smith-Waterman score: 2265; 89.8% identity (90.4% similar) in 374 aa overlap (1-339:1-374)
10 20 30 40 50 60
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_002 GLYEKPSLTARPGPTVRAGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 DFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEPSFKT-----
:::::::::::::::::::::::::::: ::::::::::::::::::::::::::
NP_002 DFPLGPATHGETYRCFGSFHGSPYEWSDPSDPLPVSVTGNPSSSWPSPTEPSFKTGIARH
190 200 210 220 230 240
240 250 260
pF1KB6 ------------------------------DAAVMNQEPAGHRTVNREDSDEQDPQEVTY
.:::::::::::::::::::::::::::::
NP_002 LHAVIRYSVAIILFTILPFFLLHRWCSKKKNAAVMNQEPAGHRTVNREDSDEQDPQEVTY
250 260 270 280 290 300
270 280 290 300 310 320
pF1KB6 AQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPNAEPRALSPAHEHHSQALMGSSRETT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPNAEPRALSPAHEHHSQALMGSSRETT
310 320 330 340 350 360
330 340
pF1KB6 ALSQTQLASSNVPAAGI
::::::::::::::
NP_002 ALSQTQLASSNVPAAGI
370
>>NP_065396 (OMIM: 605305) killer cell immunoglobulin-li (375 aa)
initn: 1298 init1: 1298 opt: 1298 Z-score: 1126.5 bits: 217.0 E(85289): 5.2e-56
Smith-Waterman score: 1773; 71.8% identity (82.8% similar) in 372 aa overlap (3-339:1-372)
10 20 30 40 50 60
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
:: :: .::.:::: :..:.: ::::::. :::::::::.:::::: :. : ::.::
NP_065 MSLMVISMACVGFFLLQGAWTHEGGQDKPLLSAWPSAVVPRGGHVTLLCRSRLGFTIF
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
.:::.::::::::::.:::.:.:..:::::::::::::: ::.:: :::::::::::.::
NP_065 SLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAPSNPLVIVVT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 GLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
::. ::::.:.:::::::::::::::::.::::.:::::::.::: :::::::.::::::
NP_065 GLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHEPRLPAVPSVNGTFQA
120 130 140 150 160 170
190 200 210 220 230
pF1KB6 DFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEPSFKT-----
:::::::::: :: ::::.: ::::::: :::: :::::: ::: :::::: ::
NP_065 DFPLGPATHGGTYTCFGSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEPSSKTGIRRH
180 190 200 210 220 230
240 250 260
pF1KB6 ------------------------------DAAVMNQEPAGHRTVNREDSDEQDPQEVTY
.::::.::::: :::::::::.::::::::
NP_065 LHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDRTVNREDSDDQDPQEVTY
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB6 AQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPNAEPRALSPAHEHHSQALMGSSRETT
::::::.::: :::.:::: : : :::.. .:::::.::.:::::.:::::: :::::::
NP_065 AQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLSPAHKHHSQALRGSSRETT
300 310 320 330 340 350
330 340
pF1KB6 ALSQTQLASSNVPAAGI
::::...:::.:::
NP_065 ALSQNRVASSHVPAAGI
360 370
>>XP_016885757 (OMIM: 615727) PREDICTED: killer cell imm (375 aa)
initn: 1292 init1: 1292 opt: 1292 Z-score: 1121.4 bits: 216.0 E(85289): 1e-55
Smith-Waterman score: 1767; 71.2% identity (82.8% similar) in 372 aa overlap (3-339:1-372)
10 20 30 40 50 60
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
:: :. .::.:::: :..:.: ::::::. :::::.:::.:::::: :. : ::.::
XP_016 MSLMVVSMACVGFFLLQGAWTHEGGQDKPLLSAWPSTVVPRGGHVTLLCRSRLGFTIF
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
.:::.::::::::::.:::.:.:..:::::::::::::: ::.:: :::::::::::.::
XP_016 SLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAPSNPLVIVVT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 GLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
::. ::::.:.:::::::::::::::::.::::.:::::::.::: :::::::.::::::
XP_016 GLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHEPRLPAVPSVNGTFQA
120 130 140 150 160 170
190 200 210 220 230
pF1KB6 DFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEPSFKT-----
:::::::::: :: ::::.: ::::::: :::: :::::: ::: :::::: ::
XP_016 DFPLGPATHGGTYTCFGSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEPSSKTGIRRH
180 190 200 210 220 230
240 250 260
pF1KB6 ------------------------------DAAVMNQEPAGHRTVNREDSDEQDPQEVTY
.::::.::::: :::::::::.::::::::
XP_016 LHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDRTVNREDSDDQDPQEVTY
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB6 AQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPNAEPRALSPAHEHHSQALMGSSRETT
::::::.::: :::.:::: : : :::.. .:::::.::.:::::.:::::: :::::::
XP_016 AQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLSPAHKHHSQALRGSSRETT
300 310 320 330 340 350
330 340
pF1KB6 ALSQTQLASSNVPAAGI
::::...:::.:::
XP_016 ALSQNRVASSHVPAAGI
360 370
>>XP_016885761 (OMIM: 615727) PREDICTED: killer cell imm (375 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1114.5 bits: 214.8 E(85289): 2.4e-55
Smith-Waterman score: 1759; 71.0% identity (82.8% similar) in 372 aa overlap (3-339:1-372)
10 20 30 40 50 60
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
:: :. .::.:::: :..:.: ::::::. :::::::::.:::::: :. : ::.::
XP_016 MSLMVVSMACVGFFLLQGAWTHEGGQDKPLLSAWPSAVVPRGGHVTLLCRSRLGFTIF
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
.:::.::::::::::.:::.:.:..:::::::::::::: ::.:: :::::::::::.::
XP_016 SLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAPSNPLVIVVT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 GLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
::. ::::.:.:::::::::::::::::.::::.:::::::.::: :::::::..:::::
XP_016 GLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHEPRLPAVPSVDGTFQA
120 130 140 150 160 170
190 200 210 220 230
pF1KB6 DFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEPSFKT-----
:::::::::: :: ::.:.: ::::::: :::: :::::: ::: :::::: ::
XP_016 DFPLGPATHGGTYTCFSSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEPSSKTGIRRH
180 190 200 210 220 230
240 250 260
pF1KB6 ------------------------------DAAVMNQEPAGHRTVNREDSDEQDPQEVTY
.::::.::::: :::::::::.::::::::
XP_016 LHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDRTVNREDSDDQDPQEVTY
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB6 AQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPNAEPRALSPAHEHHSQALMGSSRETT
::::::.::: :::.:::: : : :::.. .:::::.::.:::::.:::::: :::::::
XP_016 AQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLSPAHKHHSQALRGSSRETT
300 310 320 330 340 350
330 340
pF1KB6 ALSQTQLASSNVPAAGI
::::...:::.:::
XP_016 ALSQNRVASSHVPAAGI
360 370
>>XP_016885731 (OMIM: 615727) PREDICTED: killer cell imm (375 aa)
initn: 1284 init1: 1284 opt: 1284 Z-score: 1114.5 bits: 214.8 E(85289): 2.4e-55
Smith-Waterman score: 1759; 71.0% identity (82.8% similar) in 372 aa overlap (3-339:1-372)
10 20 30 40 50 60
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
:: :. .::.:::: :..:.: ::::::. :::::::::.:::::: :. : ::.::
XP_016 MSLMVVSMACVGFFLLQGAWTHEGGQDKPLLSAWPSAVVPRGGHVTLLCRSRLGFTIF
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
.:::.::::::::::.:::.:.:..:::::::::::::: ::.:: :::::::::::.::
XP_016 SLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAPSNPLVIVVT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 GLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
::. ::::.:.:::::::::::::::::.::::.:::::::.::: :::::::..:::::
XP_016 GLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHEPRLPAVPSVDGTFQA
120 130 140 150 160 170
190 200 210 220 230
pF1KB6 DFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEPSFKT-----
:::::::::: :: ::.:.: ::::::: :::: :::::: ::: :::::: ::
XP_016 DFPLGPATHGGTYTCFSSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEPSSKTGIRRH
180 190 200 210 220 230
240 250 260
pF1KB6 ------------------------------DAAVMNQEPAGHRTVNREDSDEQDPQEVTY
.::::.::::: :::::::::.::::::::
XP_016 LHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDRTVNREDSDDQDPQEVTY
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB6 AQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPNAEPRALSPAHEHHSQALMGSSRETT
::::::.::: :::.:::: : : :::.. .:::::.::.:::::.:::::: :::::::
XP_016 AQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLSPAHKHHSQALRGSSRETT
300 310 320 330 340 350
330 340
pF1KB6 ALSQTQLASSNVPAAGI
::::...:::.:::
XP_016 ALSQNRVASSHVPAAGI
360 370
>>NP_001018091 (OMIM: 615727) killer cell immunoglobulin (375 aa)
initn: 1280 init1: 1280 opt: 1280 Z-score: 1111.1 bits: 214.1 E(85289): 3.8e-55
Smith-Waterman score: 1745; 70.7% identity (82.5% similar) in 372 aa overlap (3-339:1-372)
10 20 30 40 50 60
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
:: :: .::.:::: :..:.: ::::::. :::::::::.:::::: :. : ::.::
NP_001 MSLMVISMACVGFFLLQGAWTHEGGQDKPLLSAWPSAVVPRGGHVTLLCRSRLGFTIF
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
.:::.::::::::::.:::.:.:..:::::::::::::: ::.:: :::::::::::.::
NP_001 SLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAPSNPLVIVVT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 GLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
::. ::::.:.:::::::::::.:::::.::::.:::::::.::: :::::::..:::::
NP_001 GLFGKPSLSAQPGPTVRTGENVALSCSSRSSFDMYHLSREGRAHEPRLPAVPSVDGTFQA
120 130 140 150 160 170
190 200 210 220 230
pF1KB6 DFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEPSFKT-----
:::::::::: :: ::.:.: ::::::: :::: :::::: ::: :::::: ::
NP_001 DFPLGPATHGGTYTCFSSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEPSSKTGIRRH
180 190 200 210 220 230
240 250 260
pF1KB6 ------------------------------DAAVMNQEPAGHRTVNREDSDEQDPQEVTY
.::::.: ::: :::::::::.::::::::
NP_001 LHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQGPAGDRTVNREDSDDQDPQEVTY
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB6 AQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPNAEPRALSPAHEHHSQALMGSSRETT
::::::.::: :::.:::: : : :::.. .:::::.::.:::::.:::::: :::::::
NP_001 AQLDHCVFTQTKITSPSQRPKAPPTDTTMYMELPNAKPRSLSPAHKHHSQALRGSSRETT
300 310 320 330 340 350
330 340
pF1KB6 ALSQTQLASSNVPAAGI
::::...:::.:::
NP_001 ALSQNRVASSHVPAAGI
360 370
>>XP_016885768 (OMIM: 615727) PREDICTED: killer cell imm (386 aa)
initn: 1262 init1: 1262 opt: 1262 Z-score: 1095.5 bits: 211.3 E(85289): 2.8e-54
Smith-Waterman score: 1737; 72.3% identity (83.1% similar) in 361 aa overlap (14-339:23-383)
10 20 30 40 50
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRC
:::: :..:.: ::::::. :::::::::.:::::: :
XP_016 MGLQAGSLHSRQPCSWVQAGTEGFFLLQGAWTHEGGQDKPLLSAWPSAVVPRGGHVTLLC
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 HYRRGFNIFTLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAP
. : ::.::.:::.::::::::::.:::.:.:..:::::::::::::: ::.:: :::::
XP_016 RSRLGFTIFSLYKEDGVPVPELYNKIFWKSILMGPVTPAHAGTYRCRGSHPRSPIEWSAP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 SNPLVIMVTGLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAV
::::::.::::. ::::.:.:::::::::::::::::.::::.:::::::.::: :::::
XP_016 SNPLVIVVTGLFGKPSLSAQPGPTVRTGENVTLSCSSRSSFDMYHLSREGRAHEPRLPAV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 PSINGTFQADFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPTEP
::.:::::::::::::::: :: ::::.: ::::::: :::: :::::: ::: :::::
XP_016 PSVNGTFQADFPLGPATHGGTYTCFGSLHDSPYEWSDPSDPLLVSVTGNSSSSSSSPTEP
190 200 210 220 230 240
240 250
pF1KB6 SFKT-----------------------------------DAAVMNQEPAGHRTVNREDSD
: :: .::::.::::: :::::::::
XP_016 SSKTGIRRHLHILIGTSVAIILFIILFFFLLHCCCSNKKNAAVMDQEPAGDRTVNREDSD
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB6 EQDPQEVTYAQLDHCIFTQRKITGPSQRSKRPSTDTSVCIELPNAEPRALSPAHEHHSQA
.::::::::::::::.::: :::.:::: : : :::.. .:::::.::.:::::.:::::
XP_016 DQDPQEVTYAQLDHCVFTQTKITSPSQRPKTPPTDTTMYMELPNAKPRSLSPAHKHHSQA
310 320 330 340 350 360
320 330 340
pF1KB6 LMGSSRETTALSQTQLASSNVPAAGI
: :::::::::::...:::.:::
XP_016 LRGSSRETTALSQNRVASSHVPAAGI
370 380
>>XP_011525242 (OMIM: 604947) PREDICTED: killer cell imm (420 aa)
initn: 1977 init1: 1159 opt: 1232 Z-score: 1069.2 bits: 206.6 E(85289): 8.1e-53
Smith-Waterman score: 1232; 65.7% identity (80.4% similar) in 286 aa overlap (26-305:119-403)
10 20 30 40 50
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRR
:.. :: : :. .. .: : :.:
XP_011 HAGTYRCRGSRPHSLTGWSAPSNPLVIMVTGNHRKPSLLAHPGPLLKSGETVILQCWSDV
90 100 110 120 130 140
60 70 80 90 100
pF1KB6 GFNIFTLYKKDGV---P---VPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWS
:. : :.. .:. : : .... . .: :.:. :. :::::: : :::: . :
XP_011 MFEHFFLHR-EGISEDPSRLVGQIHDGVSKANFSIGPLMPVLAGTYRCYGSVPHSPYQLS
150 160 170 180 190 200
110 120 130 140 150 160
pF1KB6 APSNPLVIMVTGLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLP
:::.:: :..:::::::::.:.:::::..:::::::::: ::.::::::::::::: ::
XP_011 APSDPLDIVITGLYEKPSLSAQPGPTVQAGENVTLSCSSWSSYDIYHLSREGEAHERRLR
210 220 230 240 250 260
170 180 190 200 210 220
pF1KB6 AVPSINGTFQADFPLGPATHGETYRCFGSFHGSPYEWSDASDPLPVSVTGNPSSSWPSPT
:::..: :::::::::::::: ::::::::.. : ::..:::: :::::::::::::::
XP_011 AVPKVNRTFQADFPLGPATHGGTYRCFGSFRALPCVWSNSSDPLLVSVTGNPSSSWPSPT
270 280 290 300 310 320
230 240 250 260 270 280
pF1KB6 EPSFKTDAAVMNQEPAGHRTVNREDSDEQDPQEVTYAQLDHCIFTQRKITGPSQRSKRPS
::: :.:::::.::::: :::::.::::::::::::::::::.: ::::. :::: : :
XP_011 EPSSKSDAAVMDQEPAGDRTVNRQDSDEQDPQEVTYAQLDHCVFIQRKISRPSQRPKTPL
330 340 350 360 370 380
290 300 310 320 330 340
pF1KB6 TDTSVCIELPNAEPRALSPAHEHHSQALMGSSRETTALSQTQLASSNVPAAGI
::::: ::::::::.
XP_011 TDTSVYTELPNAEPRSKVVSCPRAPQSGLEGVF
390 400 410 420
>--
initn: 576 init1: 576 opt: 576 Z-score: 507.0 bits: 102.5 E(85289): 1.7e-21
Smith-Waterman score: 576; 69.5% identity (85.6% similar) in 118 aa overlap (3-120:1-118)
10 20 30 40 50 60
pF1KB6 MSMSPTVIILACLGFFLDQSVWAHVGGQDKPFCSAWPSAVVPQGGHVTLRCHYRRGFNIF
:: ::. .::.:::: :..: .::::::: :: ::.:::.::::.:.:::::::: :
XP_011 MSLTVVSMACVGFFLLQGAWPLMGGQDKPFLSARPSTVVPRGGHVALQCHYRRGFNNF
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TLYKKDGVPVPELYNRIFWNSFLISPVTPAHAGTYRCRGFHPHSPTEWSAPSNPLVIMVT
:::.: :: ...::: .::...:::::::::::::: .::: : :::::::::::::
XP_011 MLYKEDRSHVPIFHGRIFQESFIMGPVTPAHAGTYRCRGSRPHSLTGWSAPSNPLVIMVT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 GLYEKPSLTARPGPTVRTGENVTLSCSSQSSFDIYHLSREGEAHELRLPAVPSINGTFQA
XP_011 GNHRKPSLLAHPGPLLKSGETVILQCWSDVMFEHFFLHREGISEDPSRLVGQIHDGVSKA
120 130 140 150 160 170
342 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 08:48:39 2016 done: Sat Nov 5 08:48:41 2016
Total Scan time: 8.780 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]