Result of FASTA (omim) for
pF1KB6547
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6547, 370 aa
1>>>pF1KB6547 370 - 370 aa - 370 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9323+/-0.00038; mu= 19.2767+/- 0.024
mean_var=78.8544+/-16.247, 0's: 0 Z-trim(114.5): 188 B-trim: 2186 in 2/52
Lambda= 0.144431
statistics sampled from 24133 (24336) to 24133 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.662), E-opt: 0.2 (0.285), width: 16
Scan time: 7.560
The best scores are: opt bits E(85289)
NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans ( 370) 2484 527.2 2.3e-149
XP_016860791 (OMIM: 606093) PREDICTED: peptidyl-pr ( 272) 735 162.6 9.5e-40
XP_005247023 (OMIM: 606093) PREDICTED: peptidyl-pr ( 754) 735 163.1 2e-39
NP_004783 (OMIM: 606093) peptidyl-prolyl cis-trans ( 754) 735 163.1 2e-39
XP_005247024 (OMIM: 606093) PREDICTED: peptidyl-pr ( 754) 735 163.1 2e-39
XP_016861963 (OMIM: 161565) PREDICTED: NK-tumor re (1435) 686 153.1 3.7e-36
XP_006713234 (OMIM: 161565) PREDICTED: NK-tumor re (1436) 686 153.1 3.7e-36
NP_005376 (OMIM: 161565) NK-tumor recognition prot (1462) 686 153.1 3.7e-36
XP_005265230 (OMIM: 161565) PREDICTED: NK-tumor re (1463) 686 153.1 3.7e-36
NP_005720 (OMIM: 604486) peptidyl-prolyl cis-trans ( 207) 662 147.3 3e-35
NP_066953 (OMIM: 123840) peptidyl-prolyl cis-trans ( 165) 659 146.6 3.9e-35
XP_005270419 (OMIM: 606095) PREDICTED: peptidyl-pr ( 177) 652 145.2 1.1e-34
NP_006338 (OMIM: 606095) peptidyl-prolyl cis-trans ( 177) 652 145.2 1.1e-34
XP_016855546 (OMIM: 606095) PREDICTED: peptidyl-pr ( 177) 652 145.2 1.1e-34
XP_016855541 (OMIM: 602435) PREDICTED: peptidyl-pr ( 217) 640 142.7 7.3e-34
NP_006103 (OMIM: 602435) peptidyl-prolyl cis-trans ( 301) 640 142.9 9.2e-34
NP_000933 (OMIM: 123841,259440) peptidyl-prolyl ci ( 216) 633 141.3 2e-33
XP_006710353 (OMIM: 602435) PREDICTED: peptidyl-pr ( 288) 625 139.7 7.8e-33
XP_011509880 (OMIM: 601181,608033) PREDICTED: E3 S (2281) 605 136.4 6.1e-31
XP_005264064 (OMIM: 601181,608033) PREDICTED: E3 S (2282) 605 136.4 6.1e-31
NP_982281 (OMIM: 602435) peptidyl-prolyl cis-trans ( 296) 594 133.3 7e-31
XP_011509878 (OMIM: 601181,608033) PREDICTED: E3 S (3199) 605 136.6 7.8e-31
NP_006258 (OMIM: 601181,608033) E3 SUMO-protein li (3224) 605 136.6 7.9e-31
XP_005264061 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 605 136.6 7.9e-31
XP_005264062 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 605 136.6 7.9e-31
XP_005264060 (OMIM: 601181,608033) PREDICTED: E3 S (3250) 605 136.6 7.9e-31
XP_011509877 (OMIM: 601181,608033) PREDICTED: E3 S (3257) 605 136.6 7.9e-31
XP_005264059 (OMIM: 601181,608033) PREDICTED: E3 S (3258) 605 136.6 7.9e-31
XP_011538803 (OMIM: 602435) PREDICTED: peptidyl-pr ( 230) 591 132.6 9e-31
XP_016855540 (OMIM: 602435) PREDICTED: peptidyl-pr ( 314) 591 132.7 1.1e-30
NP_001181936 (OMIM: 602435) peptidyl-prolyl cis-tr ( 314) 591 132.7 1.1e-30
NP_001306222 (OMIM: 602435) peptidyl-prolyl cis-tr ( 283) 579 130.1 5.9e-30
NP_001137504 (OMIM: 608608) peptidyl-prolyl cis-tr ( 164) 576 129.3 6.2e-30
XP_006710352 (OMIM: 602435) PREDICTED: peptidyl-pr ( 301) 576 129.5 9.6e-30
NP_000934 (OMIM: 123842) peptidyl-prolyl cis-trans ( 212) 573 128.8 1.1e-29
XP_005269436 (OMIM: 604486) PREDICTED: peptidyl-pr ( 201) 535 120.8 2.7e-27
NP_001317439 (OMIM: 606095) peptidyl-prolyl cis-tr ( 134) 441 101.1 1.6e-21
XP_016855547 (OMIM: 606095) PREDICTED: peptidyl-pr ( 134) 441 101.1 1.6e-21
XP_016855548 (OMIM: 606095) PREDICTED: peptidyl-pr ( 134) 441 101.1 1.6e-21
NP_001287910 (OMIM: 123840) peptidyl-prolyl cis-tr ( 105) 414 95.4 6.5e-20
XP_005270423 (OMIM: 606095) PREDICTED: peptidyl-pr ( 146) 361 84.4 1.7e-16
NP_057143 (OMIM: 601301) peptidyl-prolyl cis-trans ( 166) 356 83.5 3.9e-16
XP_016859845 (OMIM: 615811) PREDICTED: peptidyl-pr ( 161) 346 81.4 1.6e-15
NP_570981 (OMIM: 615811) peptidyl-prolyl cis-trans ( 161) 346 81.4 1.6e-15
XP_005246709 (OMIM: 615811) PREDICTED: peptidyl-pr ( 161) 346 81.4 1.6e-15
XP_016859844 (OMIM: 615811) PREDICTED: peptidyl-pr ( 161) 346 81.4 1.6e-15
XP_011509660 (OMIM: 615811) PREDICTED: peptidyl-pr ( 161) 346 81.4 1.6e-15
XP_016884195 (OMIM: 607588) PREDICTED: peptidyl-pr ( 266) 316 75.3 1.8e-13
XP_016884194 (OMIM: 607588) PREDICTED: peptidyl-pr ( 362) 316 75.4 2.2e-13
XP_011528352 (OMIM: 607588) PREDICTED: peptidyl-pr ( 438) 316 75.5 2.5e-13
>>NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans iso (370 aa)
initn: 2484 init1: 2484 opt: 2484 Z-score: 2802.5 bits: 527.2 E(85289): 2.3e-149
Smith-Waterman score: 2484; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370)
10 20 30 40 50 60
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 CGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNWE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MAIKKYAEVLRYVDSSKAVIETADRAKLQPIALSCVLNIGACKLKMSNWQGAIDSCLEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAIKKYAEVLRYVDSSKAVIETADRAKLQPIALSCVLNIGACKLKMSNWQGAIDSCLEAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 ELDPSNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ELDPSNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDK
310 320 330 340 350 360
370
pF1KB6 EKAVYAKMFA
::::::::::
NP_005 EKAVYAKMFA
370
>>XP_016860791 (OMIM: 606093) PREDICTED: peptidyl-prolyl (272 aa)
initn: 737 init1: 712 opt: 735 Z-score: 834.6 bits: 162.6 E(85289): 9.5e-40
Smith-Waterman score: 735; 63.5% identity (80.6% similar) in 170 aa overlap (16-184:8-177)
10 20 30 40 50 60
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
:: :::. :... .::.:.:::.:. ::: :::: ::::::: :.
XP_016 MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGK
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
.: ::::.:.: :::..: ::.::::::. :: ::::::: ::::.: ::..: ::::
XP_016 STQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSM
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGE-KPAKLCVIA
:: :..:::::::::: :::::::.::::::::.: :.: .:: .. . :: :
XP_016 ANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRIL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 ECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNW
::::
XP_016 SCGELIPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKK
180 190 200 210 220 230
>>XP_005247023 (OMIM: 606093) PREDICTED: peptidyl-prolyl (754 aa)
initn: 773 init1: 712 opt: 735 Z-score: 829.0 bits: 163.1 E(85289): 2e-39
Smith-Waterman score: 735; 63.5% identity (80.6% similar) in 170 aa overlap (16-184:8-177)
10 20 30 40 50 60
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
:: :::. :... .::.:.:::.:. ::: :::: ::::::: :.
XP_005 MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGK
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
.: ::::.:.: :::..: ::.::::::. :: ::::::: ::::.: ::..: ::::
XP_005 STQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSM
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGE-KPAKLCVIA
:: :..:::::::::: :::::::.::::::::.: :.: .:: .. . :: :
XP_005 ANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRIL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 ECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNW
::::
XP_005 SCGELIPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKK
180 190 200 210 220 230
>>NP_004783 (OMIM: 606093) peptidyl-prolyl cis-trans iso (754 aa)
initn: 773 init1: 712 opt: 735 Z-score: 829.0 bits: 163.1 E(85289): 2e-39
Smith-Waterman score: 735; 63.5% identity (80.6% similar) in 170 aa overlap (16-184:8-177)
10 20 30 40 50 60
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
:: :::. :... .::.:.:::.:. ::: :::: ::::::: :.
NP_004 MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGK
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
.: ::::.:.: :::..: ::.::::::. :: ::::::: ::::.: ::..: ::::
NP_004 STQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSM
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGE-KPAKLCVIA
:: :..:::::::::: :::::::.::::::::.: :.: .:: .. . :: :
NP_004 ANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRIL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 ECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNW
::::
NP_004 SCGELIPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKK
180 190 200 210 220 230
>>XP_005247024 (OMIM: 606093) PREDICTED: peptidyl-prolyl (754 aa)
initn: 773 init1: 712 opt: 735 Z-score: 829.0 bits: 163.1 E(85289): 2e-39
Smith-Waterman score: 735; 63.5% identity (80.6% similar) in 170 aa overlap (16-184:8-177)
10 20 30 40 50 60
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
:: :::. :... .::.:.:::.:. ::: :::: ::::::: :.
XP_005 MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGK
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
.: ::::.:.: :::..: ::.::::::. :: ::::::: ::::.: ::..: ::::
XP_005 STQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSM
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGE-KPAKLCVIA
:: :..:::::::::: :::::::.::::::::.: :.: .:: .. . :: :
XP_005 ANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRIL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 ECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNW
::::
XP_005 SCGELIPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKK
180 190 200 210 220 230
>>XP_016861963 (OMIM: 161565) PREDICTED: NK-tumor recogn (1435 aa)
initn: 718 init1: 649 opt: 686 Z-score: 770.2 bits: 153.1 E(85289): 3.7e-36
Smith-Waterman score: 686; 54.7% identity (74.2% similar) in 190 aa overlap (16-204:7-196)
10 20 30 40 50 60
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
:. ::..:. : ::::...::.:: ::: .:: ::.::::.:.
XP_016 MGAQDRPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGK
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
:::: : .:: :::..:.:::::::::. :: ::::::: :.:::: :::: ::::
XP_016 TTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSM
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGE-KPAKLCVIA
:: :..:::::::::: :.::::: ::::: ::.:. : . .::... . .: .
XP_016 ANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 ECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNW
.:: : . .: : . .: .
XP_016 DCGVLATKSIKDVFEKKRKKPTHSEGSDSSSNSSSSSESSSESELEHERSRRRKHKRRPK
180 190 200 210 220 230
>>XP_006713234 (OMIM: 161565) PREDICTED: NK-tumor recogn (1436 aa)
initn: 718 init1: 649 opt: 686 Z-score: 770.2 bits: 153.1 E(85289): 3.7e-36
Smith-Waterman score: 686; 54.7% identity (74.2% similar) in 190 aa overlap (16-204:7-196)
10 20 30 40 50 60
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
:. ::..:. : ::::...::.:: ::: .:: ::.::::.:.
XP_006 MGAQDRPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGK
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
:::: : .:: :::..:.:::::::::. :: ::::::: :.:::: :::: ::::
XP_006 TTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSM
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGE-KPAKLCVIA
:: :..:::::::::: :.::::: ::::: ::.:. : . .::... . .: .
XP_006 ANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 ECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNW
.:: : . .: : . .: .
XP_006 DCGVLATKSIKDVFEKKRKKPTHSEGSDSSSNSSSSSESSSESELEHERSRRRKHKRRPK
180 190 200 210 220 230
>>NP_005376 (OMIM: 161565) NK-tumor recognition protein (1462 aa)
initn: 718 init1: 649 opt: 686 Z-score: 770.1 bits: 153.1 E(85289): 3.7e-36
Smith-Waterman score: 686; 54.7% identity (74.2% similar) in 190 aa overlap (16-204:7-196)
10 20 30 40 50 60
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
:. ::..:. : ::::...::.:: ::: .:: ::.::::.:.
NP_005 MGAQDRPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGK
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
:::: : .:: :::..:.:::::::::. :: ::::::: :.:::: :::: ::::
NP_005 TTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSM
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGE-KPAKLCVIA
:: :..:::::::::: :.::::: ::::: ::.:. : . .::... . .: .
NP_005 ANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 ECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNW
.:: : . .: : . .: .
NP_005 DCGVLATKSIKDVFEKKRKKPTHSEGSDSSSNSSSSSESSSESELEHERSRRRKHKRRPK
180 190 200 210 220 230
>>XP_005265230 (OMIM: 161565) PREDICTED: NK-tumor recogn (1463 aa)
initn: 718 init1: 649 opt: 686 Z-score: 770.1 bits: 153.1 E(85289): 3.7e-36
Smith-Waterman score: 686; 54.7% identity (74.2% similar) in 190 aa overlap (16-204:7-196)
10 20 30 40 50 60
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGH
:. ::..:. : ::::...::.:: ::: .:: ::.::::.:.
XP_005 MGAQDRPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGK
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 TTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSM
:::: : .:: :::..:.:::::::::. :: ::::::: :.:::: :::: ::::
XP_005 TTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSM
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 ANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGE-KPAKLCVIA
:: :..:::::::::: :.::::: ::::: ::.:. : . .::... . .: .
XP_005 ANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 ECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKILLITEDLKNIGNTFFKSQNW
.:: : . .: : . .: .
XP_005 DCGVLATKSIKDVFEKKRKKPTHSEGSDSSSNSSSSSESSSESELEHERSRRRKHKRRPK
180 190 200 210 220 230
>>NP_005720 (OMIM: 604486) peptidyl-prolyl cis-trans iso (207 aa)
initn: 667 init1: 452 opt: 662 Z-score: 753.9 bits: 147.3 E(85289): 3e-35
Smith-Waterman score: 662; 58.6% identity (77.6% similar) in 174 aa overlap (11-184:41-206)
10 20 30 40
pF1KB6 MSHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADI
:. .:: :..::: .:. .::.:::: ::.
NP_005 LGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADV
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB6 VPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYG
:::::::::::::::::.: .:: :::.: .:: :.:::.:.:::::.::::
NP_005 VPKTAENFRALCTGEKGFG--------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG
80 90 100 110 120
110 120 130 140 150 160
pF1KB6 EKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVAR
.: :::: :: :.::::::: ::::::::: :. : :::::::::.: .:. :..
NP_005 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 ILENVEVKGEKPAKLCVIAECGELKEGDDGGIFPKDGSGDSHPDFPEDADIDLKDVDKIL
.:. :. . .: ::..::.:
NP_005 KIESFGSKSGRTSKKIVITDCGQLS
190 200
370 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:09:34 2016 done: Sat Nov 5 04:09:35 2016
Total Scan time: 7.560 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]