Result of FASTA (omim) for
pF1KB6520
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6520, 386 aa
1>>>pF1KB6520 386 - 386 aa - 386 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5888+/-0.000336; mu= 15.7765+/- 0.021
mean_var=84.8552+/-16.772, 0's: 0 Z-trim(117.2): 77 B-trim: 541 in 1/52
Lambda= 0.139231
statistics sampled from 28973 (29052) to 28973 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.341), width: 16
Scan time: 7.330
The best scores are: opt bits E(85289)
NP_787063 (OMIM: 606588) DNA (cytosine-5)-methyltr ( 386) 2693 550.7 2.2e-156
NP_037501 (OMIM: 606588) DNA (cytosine-5)-methyltr ( 387) 2681 548.2 1.2e-155
XP_005264234 (OMIM: 602769,615879) PREDICTED: DNA ( 689) 650 140.5 1.2e-32
XP_016859016 (OMIM: 602769,615879) PREDICTED: DNA ( 689) 650 140.5 1.2e-32
XP_011530969 (OMIM: 602769,615879) PREDICTED: DNA ( 689) 650 140.5 1.2e-32
NP_715640 (OMIM: 602769,615879) DNA (cytosine-5)-m ( 723) 650 140.5 1.2e-32
XP_011530968 (OMIM: 602769,615879) PREDICTED: DNA ( 736) 650 140.5 1.2e-32
NP_001307822 (OMIM: 602769,615879) DNA (cytosine-5 ( 760) 650 140.5 1.3e-32
XP_011530966 (OMIM: 602769,615879) PREDICTED: DNA ( 781) 650 140.5 1.3e-32
XP_011530965 (OMIM: 602769,615879) PREDICTED: DNA ( 857) 650 140.5 1.4e-32
XP_011530964 (OMIM: 602769,615879) PREDICTED: DNA ( 863) 650 140.5 1.4e-32
NP_783328 (OMIM: 602769,615879) DNA (cytosine-5)-m ( 912) 650 140.6 1.5e-32
XP_005264232 (OMIM: 602769,615879) PREDICTED: DNA ( 912) 650 140.6 1.5e-32
NP_072046 (OMIM: 602769,615879) DNA (cytosine-5)-m ( 912) 650 140.6 1.5e-32
XP_016859015 (OMIM: 602769,615879) PREDICTED: DNA ( 912) 650 140.6 1.5e-32
NP_001193985 (OMIM: 242860,602900) DNA (cytosine-5 ( 694) 623 135.0 5.1e-31
NP_001193984 (OMIM: 242860,602900) DNA (cytosine-5 ( 728) 623 135.1 5.3e-31
XP_011526956 (OMIM: 242860,602900) PREDICTED: DNA ( 740) 623 135.1 5.3e-31
NP_787045 (OMIM: 242860,602900) DNA (cytosine-5)-m ( 770) 623 135.1 5.5e-31
XP_011526955 (OMIM: 242860,602900) PREDICTED: DNA ( 782) 623 135.1 5.6e-31
NP_787044 (OMIM: 242860,602900) DNA (cytosine-5)-m ( 833) 623 135.1 5.9e-31
NP_787046 (OMIM: 242860,602900) DNA (cytosine-5)-m ( 845) 623 135.1 5.9e-31
NP_008823 (OMIM: 242860,602900) DNA (cytosine-5)-m ( 853) 623 135.1 6e-31
XP_006724731 (OMIM: 300032,300448,300504,301040,30 (1871) 175 45.4 0.0014
XP_016885100 (OMIM: 300032,300448,300504,301040,30 (2370) 175 45.4 0.0016
XP_016885099 (OMIM: 300032,300448,300504,301040,30 (2385) 175 45.5 0.0016
XP_016885098 (OMIM: 300032,300448,300504,301040,30 (2386) 175 45.5 0.0016
XP_016885097 (OMIM: 300032,300448,300504,301040,30 (2398) 175 45.5 0.0016
XP_006724730 (OMIM: 300032,300448,300504,301040,30 (2399) 175 45.5 0.0016
XP_016885096 (OMIM: 300032,300448,300504,301040,30 (2414) 175 45.5 0.0016
XP_016885095 (OMIM: 300032,300448,300504,301040,30 (2415) 175 45.5 0.0016
XP_016885094 (OMIM: 300032,300448,300504,301040,30 (2424) 175 45.5 0.0017
XP_005262214 (OMIM: 300032,300448,300504,301040,30 (2424) 175 45.5 0.0017
XP_016885093 (OMIM: 300032,300448,300504,301040,30 (2425) 175 45.5 0.0017
XP_016885092 (OMIM: 300032,300448,300504,301040,30 (2436) 175 45.5 0.0017
XP_005262213 (OMIM: 300032,300448,300504,301040,30 (2437) 175 45.5 0.0017
XP_016885091 (OMIM: 300032,300448,300504,301040,30 (2452) 175 45.5 0.0017
XP_005262212 (OMIM: 300032,300448,300504,301040,30 (2453) 175 45.5 0.0017
XP_006724729 (OMIM: 300032,300448,300504,301040,30 (2453) 175 45.5 0.0017
NP_612114 (OMIM: 300032,300448,300504,301040,30958 (2454) 175 45.5 0.0017
XP_016885090 (OMIM: 300032,300448,300504,301040,30 (2462) 175 45.5 0.0017
XP_005262211 (OMIM: 300032,300448,300504,301040,30 (2463) 175 45.5 0.0017
XP_005262210 (OMIM: 300032,300448,300504,301040,30 (2491) 175 45.5 0.0017
NP_000480 (OMIM: 300032,300448,300504,301040,30958 (2492) 175 45.5 0.0017
>>NP_787063 (OMIM: 606588) DNA (cytosine-5)-methyltransf (386 aa)
initn: 2693 init1: 2693 opt: 2693 Z-score: 2928.6 bits: 550.7 E(85289): 2.2e-156
Smith-Waterman score: 2693; 99.7% identity (99.7% similar) in 386 aa overlap (1-386:1-386)
10 20 30 40 50 60
pF1KB6 MAAIPALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 MAAIPALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VHTQHPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 VHTQHPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CVDSLVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFYDRESENPLEMFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 CVDSLVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFYDRESENPLEMFE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TVPVWRRQPVRVLSLFEDIKKELTSLGFLESGSDPGQLKHVVDVTDTVRKDVEEWGPFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 TVPVWRRQPVRVLSLFEDIKKELTSLGFLESGSDPGQLKHVVDVTDTVRKDVEEWGPFDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 VYGATPPLGHTCDRPPSWYLFQFHRLLQYARPKPGSPGPFFWMFVDNLVLNKEDLDVASR
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
NP_787 VYGATPPLGHTCDRPPSWYLFQFHRLLQYARPKPGSPRPFFWMFVDNLVLNKEDLDVASR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 FLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRHWALVSEEELSLLAQNKQSSKLAAKWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_787 FLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRHWALVSEEELSLLAQNKQSSKLAAKWP
310 320 330 340 350 360
370 380
pF1KB6 TKLVKNCFLPLREYFKYFSTELTSSL
::::::::::::::::::::::::::
NP_787 TKLVKNCFLPLREYFKYFSTELTSSL
370 380
>>NP_037501 (OMIM: 606588) DNA (cytosine-5)-methyltransf (387 aa)
initn: 2343 init1: 2343 opt: 2681 Z-score: 2915.6 bits: 548.2 E(85289): 1.2e-155
Smith-Waterman score: 2681; 99.5% identity (99.5% similar) in 387 aa overlap (1-386:1-387)
10 20 30 40 50 60
pF1KB6 MAAIPALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 MAAIPALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 VHTQHPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 VHTQHPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 CVDSLVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFYDRESENPLEMFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 CVDSLVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFYDRESENPLEMFE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TVPVWRRQPVRVLSLFEDIKKELTSLGFLESGSDPGQLKHVVDVTDTVRKDVEEWGPFDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 TVPVWRRQPVRVLSLFEDIKKELTSLGFLESGSDPGQLKHVVDVTDTVRKDVEEWGPFDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 VYGATPPLGHTCDRPPSWYLFQFHRLLQYARPKPGSPGPFFWMFVDNLVLNKEDLDVASR
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
NP_037 VYGATPPLGHTCDRPPSWYLFQFHRLLQYARPKPGSPRPFFWMFVDNLVLNKEDLDVASR
250 260 270 280 290 300
310 320 330 340 350
pF1KB6 FLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRS-RHWALVSEEELSLLAQNKQSSKLAAKW
:::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
NP_037 FLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSSRHWALVSEEELSLLAQNKQSSKLAAKW
310 320 330 340 350 360
360 370 380
pF1KB6 PTKLVKNCFLPLREYFKYFSTELTSSL
:::::::::::::::::::::::::::
NP_037 PTKLVKNCFLPLREYFKYFSTELTSSL
370 380
>>XP_005264234 (OMIM: 602769,615879) PREDICTED: DNA (cyt (689 aa)
initn: 948 init1: 565 opt: 650 Z-score: 707.2 bits: 140.5 E(85289): 1.2e-32
Smith-Waterman score: 875; 40.5% identity (65.1% similar) in 341 aa overlap (35-345:253-592)
10 20 30 40 50 60
pF1KB6 PALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQVHTQ
:. ..:::. . :::::::: ::::.: .
XP_005 AAYAPPPPAKKPRKSTAEKPKVKEIIDERTRERLVYEVRQKCRNIEDICISCGSLNVTLE
230 240 250 260 270 280
70 80 90 100 110 120
pF1KB6 HPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDS
:::: ::.: ::. ::. . ::::::::::.:::.:. .:.::: .: ::.: ::::
XP_005 HPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDL
290 300 310 320 330 340
130 140 150 160 170 180
pF1KB6 LVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFY--DRESE-NPLEMFET
:::::.. . . : ::.: .. :::.::. : :.:. :. ....: .: ...
XP_005 LVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFANNHDQEFDPPKVYPP
350 360 370 380 390 400
190 200 210 220
pF1KB6 VPVWRRQPVRVLSLFEDIKKELTSLGFL-------------ESGSDPGQLKH------VV
::. .:.:.::::::. : : : : :.. :...: :
XP_005 VPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVG
410 420 430 440 450 460
230 240 250 260 270
pF1KB6 DVTDTVRKDVEEWGPFDLVYGATP--------PLGHTCDRPPSWYLFQFHRLLQYARPKP
:: ....: ..:::::::: :..: : . . . .:.:.:::. ::::
XP_005 DVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKE
470 480 490 500 510 520
280 290 300 310 320 330
pF1KB6 GSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRH
:. ::::.: . .... : ::::: .:: : . .. . : :.:.:.. .:
XP_005 GDDRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDAKEVSAAHRARYFWGNLPGM-NRP
530 540 550 560 570 580
340 350 360 370 380
pF1KB6 WALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFSTELTSSL
: . ...: :
XP_005 LASTVNDKLELQECLEHGRIAKFSKVRTITTRSNSIKQGKDQHFPVFMNEKEDILWCTEM
590 600 610 620 630 640
>>XP_016859016 (OMIM: 602769,615879) PREDICTED: DNA (cyt (689 aa)
initn: 948 init1: 565 opt: 650 Z-score: 707.2 bits: 140.5 E(85289): 1.2e-32
Smith-Waterman score: 875; 40.5% identity (65.1% similar) in 341 aa overlap (35-345:253-592)
10 20 30 40 50 60
pF1KB6 PALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQVHTQ
:. ..:::. . :::::::: ::::.: .
XP_016 AAYAPPPPAKKPRKSTAEKPKVKEIIDERTRERLVYEVRQKCRNIEDICISCGSLNVTLE
230 240 250 260 270 280
70 80 90 100 110 120
pF1KB6 HPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDS
:::: ::.: ::. ::. . ::::::::::.:::.:. .:.::: .: ::.: ::::
XP_016 HPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDL
290 300 310 320 330 340
130 140 150 160 170 180
pF1KB6 LVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFY--DRESE-NPLEMFET
:::::.. . . : ::.: .. :::.::. : :.:. :. ....: .: ...
XP_016 LVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFANNHDQEFDPPKVYPP
350 360 370 380 390 400
190 200 210 220
pF1KB6 VPVWRRQPVRVLSLFEDIKKELTSLGFL-------------ESGSDPGQLKH------VV
::. .:.:.::::::. : : : : :.. :...: :
XP_016 VPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVG
410 420 430 440 450 460
230 240 250 260 270
pF1KB6 DVTDTVRKDVEEWGPFDLVYGATP--------PLGHTCDRPPSWYLFQFHRLLQYARPKP
:: ....: ..:::::::: :..: : . . . .:.:.:::. ::::
XP_016 DVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKE
470 480 490 500 510 520
280 290 300 310 320 330
pF1KB6 GSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRH
:. ::::.: . .... : ::::: .:: : . .. . : :.:.:.. .:
XP_016 GDDRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDAKEVSAAHRARYFWGNLPGM-NRP
530 540 550 560 570 580
340 350 360 370 380
pF1KB6 WALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFSTELTSSL
: . ...: :
XP_016 LASTVNDKLELQECLEHGRIAKFSKVRTITTRSNSIKQGKDQHFPVFMNEKEDILWCTEM
590 600 610 620 630 640
>>XP_011530969 (OMIM: 602769,615879) PREDICTED: DNA (cyt (689 aa)
initn: 948 init1: 565 opt: 650 Z-score: 707.2 bits: 140.5 E(85289): 1.2e-32
Smith-Waterman score: 875; 40.5% identity (65.1% similar) in 341 aa overlap (35-345:253-592)
10 20 30 40 50 60
pF1KB6 PALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQVHTQ
:. ..:::. . :::::::: ::::.: .
XP_011 AAYAPPPPAKKPRKSTAEKPKVKEIIDERTRERLVYEVRQKCRNIEDICISCGSLNVTLE
230 240 250 260 270 280
70 80 90 100 110 120
pF1KB6 HPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDS
:::: ::.: ::. ::. . ::::::::::.:::.:. .:.::: .: ::.: ::::
XP_011 HPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDL
290 300 310 320 330 340
130 140 150 160 170 180
pF1KB6 LVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFY--DRESE-NPLEMFET
:::::.. . . : ::.: .. :::.::. : :.:. :. ....: .: ...
XP_011 LVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFANNHDQEFDPPKVYPP
350 360 370 380 390 400
190 200 210 220
pF1KB6 VPVWRRQPVRVLSLFEDIKKELTSLGFL-------------ESGSDPGQLKH------VV
::. .:.:.::::::. : : : : :.. :...: :
XP_011 VPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVG
410 420 430 440 450 460
230 240 250 260 270
pF1KB6 DVTDTVRKDVEEWGPFDLVYGATP--------PLGHTCDRPPSWYLFQFHRLLQYARPKP
:: ....: ..:::::::: :..: : . . . .:.:.:::. ::::
XP_011 DVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKE
470 480 490 500 510 520
280 290 300 310 320 330
pF1KB6 GSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRH
:. ::::.: . .... : ::::: .:: : . .. . : :.:.:.. .:
XP_011 GDDRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDAKEVSAAHRARYFWGNLPGM-NRP
530 540 550 560 570 580
340 350 360 370 380
pF1KB6 WALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFSTELTSSL
: . ...: :
XP_011 LASTVNDKLELQECLEHGRIAKFSKVRTITTRSNSIKQGKDQHFPVFMNEKEDILWCTEM
590 600 610 620 630 640
>>NP_715640 (OMIM: 602769,615879) DNA (cytosine-5)-methy (723 aa)
initn: 948 init1: 565 opt: 650 Z-score: 707.0 bits: 140.5 E(85289): 1.2e-32
Smith-Waterman score: 875; 40.5% identity (65.1% similar) in 341 aa overlap (35-345:287-626)
10 20 30 40 50 60
pF1KB6 PALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQVHTQ
:. ..:::. . :::::::: ::::.: .
NP_715 AAYAPPPPAKKPRKSTAEKPKVKEIIDERTRERLVYEVRQKCRNIEDICISCGSLNVTLE
260 270 280 290 300 310
70 80 90 100 110 120
pF1KB6 HPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDS
:::: ::.: ::. ::. . ::::::::::.:::.:. .:.::: .: ::.: ::::
NP_715 HPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDL
320 330 340 350 360 370
130 140 150 160 170 180
pF1KB6 LVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFY--DRESE-NPLEMFET
:::::.. . . : ::.: .. :::.::. : :.:. :. ....: .: ...
NP_715 LVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFANNHDQEFDPPKVYPP
380 390 400 410 420 430
190 200 210 220
pF1KB6 VPVWRRQPVRVLSLFEDIKKELTSLGFL-------------ESGSDPGQLKH------VV
::. .:.:.::::::. : : : : :.. :...: :
NP_715 VPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVG
440 450 460 470 480 490
230 240 250 260 270
pF1KB6 DVTDTVRKDVEEWGPFDLVYGATP--------PLGHTCDRPPSWYLFQFHRLLQYARPKP
:: ....: ..:::::::: :..: : . . . .:.:.:::. ::::
NP_715 DVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKE
500 510 520 530 540 550
280 290 300 310 320 330
pF1KB6 GSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRH
:. ::::.: . .... : ::::: .:: : . .. . : :.:.:.. .:
NP_715 GDDRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDAKEVSAAHRARYFWGNLPGM-NRP
560 570 580 590 600 610
340 350 360 370 380
pF1KB6 WALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFSTELTSSL
: . ...: :
NP_715 LASTVNDKLELQECLEHGRIAKFSKVRTITTRSNSIKQGKDQHFPVFMNEKEDILWCTEM
620 630 640 650 660 670
>>XP_011530968 (OMIM: 602769,615879) PREDICTED: DNA (cyt (736 aa)
initn: 948 init1: 565 opt: 650 Z-score: 706.8 bits: 140.5 E(85289): 1.2e-32
Smith-Waterman score: 875; 40.5% identity (65.1% similar) in 341 aa overlap (35-345:300-639)
10 20 30 40 50 60
pF1KB6 PALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQVHTQ
:. ..:::. . :::::::: ::::.: .
XP_011 AAYAPPPPAKKPRKSTAEKPKVKEIIDERTRERLVYEVRQKCRNIEDICISCGSLNVTLE
270 280 290 300 310 320
70 80 90 100 110 120
pF1KB6 HPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDS
:::: ::.: ::. ::. . ::::::::::.:::.:. .:.::: .: ::.: ::::
XP_011 HPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDL
330 340 350 360 370 380
130 140 150 160 170 180
pF1KB6 LVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFY--DRESE-NPLEMFET
:::::.. . . : ::.: .. :::.::. : :.:. :. ....: .: ...
XP_011 LVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFANNHDQEFDPPKVYPP
390 400 410 420 430 440
190 200 210 220
pF1KB6 VPVWRRQPVRVLSLFEDIKKELTSLGFL-------------ESGSDPGQLKH------VV
::. .:.:.::::::. : : : : :.. :...: :
XP_011 VPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVG
450 460 470 480 490 500
230 240 250 260 270
pF1KB6 DVTDTVRKDVEEWGPFDLVYGATP--------PLGHTCDRPPSWYLFQFHRLLQYARPKP
:: ....: ..:::::::: :..: : . . . .:.:.:::. ::::
XP_011 DVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKE
510 520 530 540 550 560
280 290 300 310 320 330
pF1KB6 GSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRH
:. ::::.: . .... : ::::: .:: : . .. . : :.:.:.. .:
XP_011 GDDRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDAKEVSAAHRARYFWGNLPGM-NRP
570 580 590 600 610 620
340 350 360 370 380
pF1KB6 WALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFSTELTSSL
: . ...: :
XP_011 LASTVNDKLELQECLEHGRIAKFSKVRTITTRSNSIKQGKDQHFPVFMNEKEDILWCTEM
630 640 650 660 670 680
>>NP_001307822 (OMIM: 602769,615879) DNA (cytosine-5)-me (760 aa)
initn: 948 init1: 565 opt: 650 Z-score: 706.7 bits: 140.5 E(85289): 1.3e-32
Smith-Waterman score: 875; 40.5% identity (65.1% similar) in 341 aa overlap (35-345:324-663)
10 20 30 40 50 60
pF1KB6 PALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQVHTQ
:. ..:::. . :::::::: ::::.: .
NP_001 AAYAPPPPAKKPRKSTAEKPKVKEIIDERTRERLVYEVRQKCRNIEDICISCGSLNVTLE
300 310 320 330 340 350
70 80 90 100 110 120
pF1KB6 HPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDS
:::: ::.: ::. ::. . ::::::::::.:::.:. .:.::: .: ::.: ::::
NP_001 HPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDL
360 370 380 390 400 410
130 140 150 160 170 180
pF1KB6 LVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFY--DRESE-NPLEMFET
:::::.. . . : ::.: .. :::.::. : :.:. :. ....: .: ...
NP_001 LVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFANNHDQEFDPPKVYPP
420 430 440 450 460 470
190 200 210 220
pF1KB6 VPVWRRQPVRVLSLFEDIKKELTSLGFL-------------ESGSDPGQLKH------VV
::. .:.:.::::::. : : : : :.. :...: :
NP_001 VPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVG
480 490 500 510 520 530
230 240 250 260 270
pF1KB6 DVTDTVRKDVEEWGPFDLVYGATP--------PLGHTCDRPPSWYLFQFHRLLQYARPKP
:: ....: ..:::::::: :..: : . . . .:.:.:::. ::::
NP_001 DVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKE
540 550 560 570 580 590
280 290 300 310 320 330
pF1KB6 GSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRH
:. ::::.: . .... : ::::: .:: : . .. . : :.:.:.. .:
NP_001 GDDRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDAKEVSAAHRARYFWGNLPGM-NRP
600 610 620 630 640 650
340 350 360 370 380
pF1KB6 WALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFSTELTSSL
: . ...: :
NP_001 LASTVNDKLELQECLEHGRIAKFSKVRTITTRSNSIKQGKDQHFPVFMNEKEDILWCTEM
660 670 680 690 700 710
>>XP_011530966 (OMIM: 602769,615879) PREDICTED: DNA (cyt (781 aa)
initn: 879 init1: 565 opt: 650 Z-score: 706.5 bits: 140.5 E(85289): 1.3e-32
Smith-Waterman score: 832; 42.2% identity (66.1% similar) in 301 aa overlap (35-305:476-776)
10 20 30 40 50 60
pF1KB6 PALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQVHTQ
:. ..:::. . :::::::: ::::.: .
XP_011 AAYAPPPPAKKPRKSTAEKPKVKEIIDERTRERLVYEVRQKCRNIEDICISCGSLNVTLE
450 460 470 480 490 500
70 80 90 100 110 120
pF1KB6 HPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDS
:::: ::.: ::. ::. . ::::::::::.:::.:. .:.::: .: ::.: ::::
XP_011 HPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDL
510 520 530 540 550 560
130 140 150 160 170 180
pF1KB6 LVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFY--DRESE-NPLEMFET
:::::.. . . : ::.: .. :::.::. : :.:. :. ....: .: ...
XP_011 LVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFANNHDQEFDPPKVYPP
570 580 590 600 610 620
190 200 210 220
pF1KB6 VPVWRRQPVRVLSLFEDIKKELTSLGFL-------------ESGSDPGQLKH------VV
::. .:.:.::::::. : : : : :.. :...: :
XP_011 VPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVG
630 640 650 660 670 680
230 240 250 260 270
pF1KB6 DVTDTVRKDVEEWGPFDLVYGATP--------PLGHTCDRPPSWYLFQFHRLLQYARPKP
:: ....: ..:::::::: :..: : . . . .:.:.:::. ::::
XP_011 DVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKE
690 700 710 720 730 740
280 290 300 310 320 330
pF1KB6 GSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRH
:. ::::.: . .... : :::::..
XP_011 GDDRPFFWLFENVVAMGVSDKRDISRFLEVQNSHLY
750 760 770 780
340 350 360 370 380
pF1KB6 WALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFSTELTSSL
>>XP_011530965 (OMIM: 602769,615879) PREDICTED: DNA (cyt (857 aa)
initn: 948 init1: 565 opt: 650 Z-score: 705.9 bits: 140.5 E(85289): 1.4e-32
Smith-Waterman score: 875; 40.5% identity (65.1% similar) in 341 aa overlap (35-345:421-760)
10 20 30 40 50 60
pF1KB6 PALDPEAEPSMDVILVGSSELSSSVSPGTGRDLIAYEVKANQRNIEDICICCGSLQVHTQ
:. ..:::. . :::::::: ::::.: .
XP_011 AAYAPPPPAKKPRKSTAEKPKVKEIIDERTRERLVYEVRQKCRNIEDICISCGSLNVTLE
400 410 420 430 440 450
70 80 90 100 110 120
pF1KB6 HPLFEGGICAPCKDKFLDALFLYDDDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDS
:::: ::.: ::. ::. . ::::::::::.:::.:. .:.::: .: ::.: ::::
XP_011 HPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDL
460 470 480 490 500 510
130 140 150 160 170 180
pF1KB6 LVGPGTSGKVHAMSNWVCYLCLPSSRSGLLQRRRKWRSQLKAFY--DRESE-NPLEMFET
:::::.. . . : ::.: .. :::.::. : :.:. :. ....: .: ...
XP_011 LVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFANNHDQEFDPPKVYPP
520 530 540 550 560 570
190 200 210 220
pF1KB6 VPVWRRQPVRVLSLFEDIKKELTSLGFL-------------ESGSDPGQLKH------VV
::. .:.:.::::::. : : : : :.. :...: :
XP_011 VPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVG
580 590 600 610 620 630
230 240 250 260 270
pF1KB6 DVTDTVRKDVEEWGPFDLVYGATP--------PLGHTCDRPPSWYLFQFHRLLQYARPKP
:: ....: ..:::::::: :..: : . . . .:.:.:::. ::::
XP_011 DVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFYRLLHDARPKE
640 650 660 670 680 690
280 290 300 310 320 330
pF1KB6 GSPGPFFWMFVDNLVLNKEDLDVASRFLEMEPVTIPDVHGGSLQNAVRVWSNIPAIRSRH
:. ::::.: . .... : ::::: .:: : . .. . : :.:.:.. .:
XP_011 GDDRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDAKEVSAAHRARYFWGNLPGM-NRP
700 710 720 730 740
340 350 360 370 380
pF1KB6 WALVSEEELSLLAQNKQSSKLAAKWPTKLVKNCFLPLREYFKYFSTELTSSL
: . ...: :
XP_011 LASTVNDKLELQECLEHGRIAKFSKVRTITTRSNSIKQGKDQHFPVFMNEKEDILWCTEM
750 760 770 780 790 800
386 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 08:02:56 2016 done: Sat Nov 5 08:02:57 2016
Total Scan time: 7.330 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]