Result of FASTA (ccds) for
pF1KB6455
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6455, 318 aa
1>>>pF1KB6455 318 - 318 aa - 318 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5896+/-0.0011; mu= 13.1305+/- 0.066
mean_var=56.3733+/-10.958, 0's: 0 Z-trim(100.9): 26 B-trim: 0 in 0/48
Lambda= 0.170820
statistics sampled from 6282 (6298) to 6282 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.562), E-opt: 0.2 (0.193), width: 16
Scan time: 2.160
The best scores are: opt bits E(32554)
CCDS14529.1 PRPS1 gene_id:5631|Hs108|chrX ( 318) 2070 518.8 2.2e-147
CCDS14150.1 PRPS2 gene_id:5634|Hs108|chrX ( 318) 1990 499.1 1.9e-141
CCDS43918.1 PRPS2 gene_id:5634|Hs108|chrX ( 321) 1974 495.1 3e-140
CCDS47552.1 PRPS1L1 gene_id:221823|Hs108|chr7 ( 318) 1953 490.0 1.1e-138
CCDS76007.1 PRPS1 gene_id:5631|Hs108|chrX ( 114) 738 190.5 5.5e-49
CCDS58525.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 320) 604 157.5 1.3e-38
CCDS58527.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 283) 366 98.8 5.1e-21
CCDS58526.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 329) 366 98.9 5.9e-21
CCDS11200.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 369) 366 98.9 6.6e-21
CCDS82209.1 PRPSAP1 gene_id:5635|Hs108|chr17 ( 282) 347 94.2 1.3e-19
CCDS11743.2 PRPSAP1 gene_id:5635|Hs108|chr17 ( 385) 347 94.2 1.8e-19
>>CCDS14529.1 PRPS1 gene_id:5631|Hs108|chrX (318 aa)
initn: 2070 init1: 2070 opt: 2070 Z-score: 2759.4 bits: 518.8 E(32554): 2.2e-147
Smith-Waterman score: 2070; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KB6 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
250 260 270 280 290 300
310
pF1KB6 RRTHNGESVSYLFSHVPL
::::::::::::::::::
CCDS14 RRTHNGESVSYLFSHVPL
310
>>CCDS14150.1 PRPS2 gene_id:5634|Hs108|chrX (318 aa)
initn: 1990 init1: 1990 opt: 1990 Z-score: 2652.9 bits: 499.1 E(32554): 1.9e-141
Smith-Waterman score: 1990; 95.3% identity (98.7% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KB6 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
:::: .:::::::::::..::::::::::::::::::::: ::::::::::::::.::::
CCDS14 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
CCDS14 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS
::::::::::::::::::::::::::::::::.::::::.::.:: ::::::::::::::
CCDS14 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
::.::::::::::::::::::::: :::::::::::::::::::.:::::::::::::::
CCDS14 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAI
250 260 270 280 290 300
310
pF1KB6 RRTHNGESVSYLFSHVPL
::::::::::::::::::
CCDS14 RRTHNGESVSYLFSHVPL
310
>>CCDS43918.1 PRPS2 gene_id:5634|Hs108|chrX (321 aa)
initn: 1375 init1: 1375 opt: 1974 Z-score: 2631.5 bits: 495.1 E(32554): 3e-140
Smith-Waterman score: 1974; 94.4% identity (97.8% similar) in 321 aa overlap (1-318:1-321)
10 20 30 40 50 60
pF1KB6 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
:::: .:::::::::::..::::::::::::::::::::: ::::::::::::::.::::
CCDS43 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
10 20 30 40 50 60
70 80 90 100 110
pF1KB6 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDK---SRAPISAKLVANMLS
:::::::::::::::::::::.:::::::::::::::::::: :::::::::::::::
CCDS43 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKVGESRAPISAKLVANMLS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKR
:::::::::::::::::::::::::::::::::::.::::::.::.:: :::::::::::
CCDS43 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 VTSIADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL
::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 SAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILA
:::::.::::::::::::::::::::: :::::::::::::::::::.::::::::::::
CCDS43 SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILA
250 260 270 280 290 300
300 310
pF1KB6 EAIRRTHNGESVSYLFSHVPL
:::::::::::::::::::::
CCDS43 EAIRRTHNGESVSYLFSHVPL
310 320
>>CCDS47552.1 PRPS1L1 gene_id:221823|Hs108|chr7 (318 aa)
initn: 1953 init1: 1953 opt: 1953 Z-score: 2603.6 bits: 490.0 E(32554): 1.1e-138
Smith-Waterman score: 1953; 94.3% identity (98.1% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KB6 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
:::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
CCDS47 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
:::::.::::::::::::::::::::::::::::::::::::::.::::::::::::.::
CCDS47 GEINDSLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS
:::::::::::::::::::::::::::::.::::::::: ::.:: ::::::::::::::
CCDS47 ADHIITMDLHASQIQGFFDIPVDNLYAEPTVLKWIRENIPEWKNCIIVSPDAGGAKRVTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
:::.::::::::::::::::::: .::::::.:::::::::::::: ::: :::::::::
CCDS47 IADQLNVDFALIHKERKKANEVDCIVLVGDVNDRVAILVDDMADTCVTICLAADKLLSAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
::::::::::::::::::::::.::::::::::::::..::::::::.::::::::::::
CCDS47 ATRVYAILTHGIFSGPAISRINTACFEAVVVTNTIPQDEKMKHCSKIRVIDISMILAEAI
250 260 270 280 290 300
310
pF1KB6 RRTHNGESVSYLFSHVPL
::::::::::::::::::
CCDS47 RRTHNGESVSYLFSHVPL
310
>>CCDS76007.1 PRPS1 gene_id:5631|Hs108|chrX (114 aa)
initn: 738 init1: 738 opt: 738 Z-score: 993.0 bits: 190.5 E(32554): 5.5e-49
Smith-Waterman score: 738; 100.0% identity (100.0% similar) in 114 aa overlap (205-318:1-114)
180 190 200 210 220 230
pF1KB6 AKRVTSIADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAAD
::::::::::::::::::::::::::::::
CCDS76 MVLVGDVKDRVAILVDDMADTCGTICHAAD
10 20 30
240 250 260 270 280 290
pF1KB6 KLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 KLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISM
40 50 60 70 80 90
300 310
pF1KB6 ILAEAIRRTHNGESVSYLFSHVPL
::::::::::::::::::::::::
CCDS76 ILAEAIRRTHNGESVSYLFSHVPL
100 110
>>CCDS58525.1 PRPSAP2 gene_id:5636|Hs108|chr17 (320 aa)
initn: 837 init1: 320 opt: 604 Z-score: 806.8 bits: 157.5 E(32554): 1.3e-38
Smith-Waterman score: 752; 46.0% identity (70.4% similar) in 311 aa overlap (8-318:27-318)
10 20 30 40
pF1KB6 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETC
:.:: ..::.:::.:::.:.::: . . :.::
CCDS58 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 VEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKD
:.: :::::.::.:.:. ..: ..::::::. ::: . :. . .::: :::..: :
CCDS58 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 KSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISE
: :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .:..:.:.: .
CCDS58 K-RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPD
130 140 150 160 170
170 180 190 200 210 220
pF1KB6 WRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDD
.:: .::. . ..:::. :.:.:: . .:.:: : . : : : :: : .
CCDS58 YRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDA-ESD---LV-DGRHS-----PP
180 190 200 210 220
230 240 250 260 270 280
pF1KB6 MADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKM
:. . ..: : . .. . : . : .: :: .::::::::.: .
CCDS58 MVRSVAAI-HPSLEIPMLIPKEKPPITVVGDVGG----RIAII---VVVVTNTIPHEVQK
230 240 250 260 270 280
290 300 310
pF1KB6 KHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL
.: ::...::::::.::::: :::::.:::: .. :
CCDS58 LQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD
290 300 310 320
>>CCDS58527.1 PRPSAP2 gene_id:5636|Hs108|chr17 (283 aa)
initn: 762 init1: 359 opt: 366 Z-score: 490.8 bits: 98.8 E(32554): 5.1e-21
Smith-Waterman score: 711; 44.0% identity (68.4% similar) in 282 aa overlap (68-318:1-281)
40 50 60 70 80 90
pF1KB6 QETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQ
::::::. ::: . :. . .::: :::..:
CCDS58 MELLIMVYACKTSCAKSIIGVIPYFPYSKQ
10 20 30
100 110 120 130 140 150
pF1KB6 DKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRE
: : :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .:..:.:
CCDS58 CKMRK-RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQE
40 50 60 70 80
160 170 180 190 200
pF1KB6 NISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKAN-----------------
.: ..:: .::. . ..:::. :.:.:: . .:.:: : . :.
CCDS58 EIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVA
90 100 110 120 130 140
210 220 230 240
pF1KB6 ------EVDRMV--------LVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYA
:. .. .:::: :.::.:::. : .. ::. : :: ....
CCDS58 AIHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFV
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB6 ILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNG
. :::..:. : ::... .. ::::::::.: . .: ::...::::::.::::: :::
CCDS58 MATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNG
210 220 230 240 250 260
310
pF1KB6 ESVSYLFSHVPL
::.:::: .. :
CCDS58 ESMSYLFRNIGLDD
270 280
>>CCDS58526.1 PRPSAP2 gene_id:5636|Hs108|chr17 (329 aa)
initn: 801 init1: 359 opt: 366 Z-score: 489.6 bits: 98.9 E(32554): 5.9e-21
Smith-Waterman score: 735; 39.8% identity (66.9% similar) in 332 aa overlap (18-318:8-327)
10 20 30 40 50 60
pF1KB6 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
.. .... : .: . ... .:.:..... .:::
CCDS58 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKI-AEDV-------
10 20 30 40
70 80 90 100 110 120
pF1KB6 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
: ..::::::. ::: . :. . .::: :::..: : : :. : .::.:.:. ::
CCDS58 ---NTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRK-RGSIVSKLLASMMCKAG
50 60 70 80 90
130 140 150 160 170 180
pF1KB6 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS
:.:::::: ..:::::.:::::: : : .:..:.:.: ..:: .::. . ..:::. :
CCDS58 LTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQS
100 110 120 130 140 150
190 200
pF1KB6 IADRLNVDFALIHKERKKAN-----------------------EVDRMV--------LVG
.:.:: . .:.:: : . :. :. .. .::
CCDS58 FAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITVVG
160 170 180 190 200 210
210 220 230 240 250 260
pF1KB6 DVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAV
:: :.::.:::. : .. ::. : :: ..... :::..:. : ::... .. :
CCDS58 DVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEV
220 230 240 250 260 270
270 280 290 300 310
pF1KB6 VVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL
:::::::.: . .: ::...::::::.::::: :::::.:::: .. :
CCDS58 VVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD
280 290 300 310 320
>>CCDS11200.1 PRPSAP2 gene_id:5636|Hs108|chr17 (369 aa)
initn: 947 init1: 359 opt: 366 Z-score: 488.8 bits: 98.9 E(32554): 6.6e-21
Smith-Waterman score: 896; 45.0% identity (70.8% similar) in 342 aa overlap (8-318:27-367)
10 20 30 40
pF1KB6 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETC
:.:: ..::.:::.:::.:.::: . . :.::
CCDS11 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 VEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKD
:.: :::::.::.:.:. ..: ..::::::. ::: . :. . .::: :::..: :
CCDS11 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 KSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISE
: :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .:..:.:.: .
CCDS11 K-RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPD
130 140 150 160 170
170 180 190 200
pF1KB6 WRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKAN---------------------
.:: .::. . ..:::. :.:.:: . .:.:: : . :.
CCDS11 YRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHP
180 190 200 210 220 230
210 220 230 240 250
pF1KB6 --EVDRMV--------LVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTH
:. .. .:::: :.::.:::. : .. ::. : :: ..... ::
CCDS11 SLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATH
240 250 260 270 280 290
260 270 280 290 300 310
pF1KB6 GIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHNGESVS
:..:. : ::... .. ::::::::.: . .: ::...::::::.::::: :::::.:
CCDS11 GLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMS
300 310 320 330 340 350
pF1KB6 YLFSHVPL
::: .. :
CCDS11 YLFRNIGLDD
360
>>CCDS82209.1 PRPSAP1 gene_id:5635|Hs108|chr17 (282 aa)
initn: 630 init1: 340 opt: 347 Z-score: 465.5 bits: 94.2 E(32554): 1.3e-19
Smith-Waterman score: 674; 44.8% identity (66.2% similar) in 281 aa overlap (68-316:1-278)
40 50 60 70 80 90
pF1KB6 QETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQ
:::::: : : : : . .::: :::..:
CCDS82 MELLIMAYALKTACARNIIGVIPYFPYSKQ
10 20 30
100 110 120 130 140 150
pF1KB6 DKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRE
.: : :. : ::.:.::. :: :::::::: ..:::::..::::: : : .:..:.:
CCDS82 SKMRK-RGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQE
40 50 60 70 80
160 170 180 190
pF1KB6 NISEWRNCTIV--SPDAGGAKRVTSIADRLNVDFALIHKERK------------------
.: ..:: .:: :::: :::. : :.:: . .:.:: : .
CCDS82 EIPNYRNAVIVAKSPDA--AKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKN
90 100 110 120 130 140
200 210 220 230 240
pF1KB6 ------------KANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRVY
:.: ...:::: :.::.:::. : .. ::. : :: ..:
CCDS82 ATVHPGLELPLMMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIY
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB6 AILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRRTHN
.. ::::.:. : :... . ::::::.:.: . .: ::...:::.::.::::: ::
CCDS82 VMATHGILSAEAPRLIEESSVDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHN
210 220 230 240 250 260
310
pF1KB6 GESVSYLFSHVPL
:::..::: ..
CCDS82 GESMAYLFRNITVDD
270 280
318 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:02:03 2016 done: Fri Nov 4 23:02:03 2016
Total Scan time: 2.160 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]