Result of FASTA (omim) for
pF1KB6412
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6412, 335 aa
1>>>pF1KB6412 335 - 335 aa - 335 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7095+/-0.00034; mu= 14.7609+/- 0.021
mean_var=94.1738+/-18.301, 0's: 0 Z-trim(118.1): 72 B-trim: 155 in 1/54
Lambda= 0.132163
statistics sampled from 30682 (30774) to 30682 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.361), width: 16
Scan time: 7.730
The best scores are: opt bits E(85289)
NP_002650 (OMIM: 173391) urokinase plasminogen act ( 335) 2429 473.1 3.7e-133
XP_016882361 (OMIM: 173391) PREDICTED: urokinase p ( 330) 2292 446.9 2.7e-125
NP_001005376 (OMIM: 173391) urokinase plasminogen ( 281) 1832 359.2 6e-99
XP_005259047 (OMIM: 173391) PREDICTED: urokinase p ( 279) 1827 358.2 1.2e-98
XP_011525329 (OMIM: 173391) PREDICTED: urokinase p ( 287) 1720 337.8 1.6e-92
XP_016882362 (OMIM: 173391) PREDICTED: urokinase p ( 211) 1564 308.0 1.2e-83
XP_011525330 (OMIM: 173391) PREDICTED: urokinase p ( 247) 1481 292.2 7.7e-79
XP_011525331 (OMIM: 173391) PREDICTED: urokinase p ( 247) 1481 292.2 7.7e-79
NP_001287966 (OMIM: 173391) urokinase plasminogen ( 286) 1478 291.7 1.3e-78
XP_011525333 (OMIM: 173391) PREDICTED: urokinase p ( 217) 1475 291.0 1.5e-78
XP_011525332 (OMIM: 173391) PREDICTED: urokinase p ( 241) 1179 234.6 1.6e-61
NP_001005377 (OMIM: 173391) urokinase plasminogen ( 290) 1136 226.5 5.5e-59
NP_055215 (OMIM: 609484) ly6/PLAUR domain-containi ( 346) 182 44.6 0.00036
>>NP_002650 (OMIM: 173391) urokinase plasminogen activat (335 aa)
initn: 2429 init1: 2429 opt: 2429 Z-score: 2511.5 bits: 473.1 E(85289): 3.7e-133
Smith-Waterman score: 2429; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335)
10 20 30 40 50 60
pF1KB6 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
250 260 270 280 290 300
310 320 330
pF1KB6 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
:::::::::::::::::::::::::::::::::::
NP_002 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
310 320 330
>>XP_016882361 (OMIM: 173391) PREDICTED: urokinase plasm (330 aa)
initn: 2292 init1: 2292 opt: 2292 Z-score: 2370.5 bits: 446.9 E(85289): 2.7e-125
Smith-Waterman score: 2292; 99.7% identity (100.0% similar) in 317 aa overlap (19-335:14-330)
10 20 30 40 50 60
pF1KB6 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
.:::::::::::::::::::::::::::::::::::::::::
XP_016 MDTNLNGRGLETWSSWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB6 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
240 250 260 270 280 290
310 320 330
pF1KB6 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
:::::::::::::::::::::::::::::::::::
XP_016 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
300 310 320 330
>>NP_001005376 (OMIM: 173391) urokinase plasminogen acti (281 aa)
initn: 1862 init1: 1832 opt: 1832 Z-score: 1897.4 bits: 359.2 E(85289): 6e-99
Smith-Waterman score: 1832; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252)
10 20 30 40 50 60
pF1KB6 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
::::::::::::
NP_001 MNQCLVATGTHERSLWGSWLPCKSTTALRPPCCEEAQATHV
250 260 270 280
>>XP_005259047 (OMIM: 173391) PREDICTED: urokinase plasm (279 aa)
initn: 1826 init1: 1826 opt: 1827 Z-score: 1892.3 bits: 358.2 E(85289): 1.2e-98
Smith-Waterman score: 1827; 92.4% identity (94.2% similar) in 278 aa overlap (1-275:1-278)
10 20 30 40 50 60
pF1KB6 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 MNQCLVATGTH---EPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPD
::::::::::: . . . : :.: : . ::
XP_005 MNQCLVATGTHGCGHFCHGKVEFRLGAVAEACTLSTLGG
250 260 270
300 310 320 330
pF1KB6 LDVQYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
>>XP_011525329 (OMIM: 173391) PREDICTED: urokinase plasm (287 aa)
initn: 2106 init1: 1707 opt: 1720 Z-score: 1781.8 bits: 337.8 E(85289): 1.6e-92
Smith-Waterman score: 2014; 85.7% identity (85.7% similar) in 335 aa overlap (1-335:1-287)
10 20 30 40 50 60
pF1KB6 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWE-----
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
:::::::::::::::::
XP_011 -------------------------------------------GRAVTYSRSRYLECISC
60 70
130 140 150 160 170 180
pF1KB6 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB6 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB6 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
200 210 220 230 240 250
310 320 330
pF1KB6 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
:::::::::::::::::::::::::::::::::::
XP_011 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
260 270 280
>>XP_016882362 (OMIM: 173391) PREDICTED: urokinase plasm (211 aa)
initn: 1564 init1: 1564 opt: 1564 Z-score: 1622.9 bits: 308.0 E(85289): 1.2e-83
Smith-Waterman score: 1564; 100.0% identity (100.0% similar) in 211 aa overlap (125-335:1-211)
100 110 120 130 140 150
pF1KB6 LDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQE
::::::::::::::::::::::::::::::
XP_016 MSCERGRHQSLQCRSPEEQCLDVVTHWIQE
10 20 30
160 170 180 190 200 210
pF1KB6 GEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGR
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB6 QCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHL
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB6 GDAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLW
160 170 180 190 200 210
pF1KB6 T
:
XP_016 T
>>XP_011525330 (OMIM: 173391) PREDICTED: urokinase plasm (247 aa)
initn: 1472 init1: 1472 opt: 1481 Z-score: 1536.4 bits: 292.2 E(85289): 7.7e-79
Smith-Waterman score: 1481; 94.9% identity (96.3% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB6 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
:::::::::::::::::::::: : :. . . :
XP_011 FHNNDTFHFLKCCNTTKCNEGPSKERETQSWSLKICRRMAASVTAARGTAPMDAPLKRLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
XP_011 SLTAEAP
>>XP_011525331 (OMIM: 173391) PREDICTED: urokinase plasm (247 aa)
initn: 1472 init1: 1472 opt: 1481 Z-score: 1536.4 bits: 292.2 E(85289): 7.7e-79
Smith-Waterman score: 1481; 94.9% identity (96.3% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KB6 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
:::::::::::::::::::::: : :. . . :
XP_011 FHNNDTFHFLKCCNTTKCNEGPSKERETQSWSLKICRRMAASVTAARGTAPMDAPLKRLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
XP_011 SLTAEAP
>>NP_001287966 (OMIM: 173391) urokinase plasminogen acti (286 aa)
initn: 2056 init1: 1472 opt: 1478 Z-score: 1532.5 bits: 291.7 E(85289): 1.3e-78
Smith-Waterman score: 1962; 85.1% identity (85.4% similar) in 335 aa overlap (1-335:1-286)
10 20 30 40 50 60
pF1KB6 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
::::::::::::::::::::::
NP_001 FHNNDTFHFLKCCNTTKCNEGP--------------------------------------
190 200
250 260 270 280 290 300
pF1KB6 MNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
.::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -----------KPKNQSYMVRGCATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPDLDV
210 220 230 240 250
310 320 330
pF1KB6 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
:::::::::::::::::::::::::::::::::::
NP_001 QYRSGAAPQPGPAHLSLTITLLMTARLWGGTLLWT
260 270 280
>>XP_011525333 (OMIM: 173391) PREDICTED: urokinase plasm (217 aa)
initn: 1472 init1: 1472 opt: 1475 Z-score: 1531.0 bits: 291.0 E(85289): 1.5e-78
Smith-Waterman score: 1475; 98.6% identity (98.6% similar) in 207 aa overlap (1-207:1-207)
10 20 30 40 50 60
pF1KB6 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGHPPLLPLLLLLHTCVPASWGLRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELVEKSCTHSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGP
:::::::::::::::::::::: : :
XP_011 FHNNDTFHFLKCCNTTKCNEGPSKERETQNRKTKAIW
190 200 210
335 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:54:29 2016 done: Fri Nov 4 22:54:30 2016
Total Scan time: 7.730 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]