Result of FASTA (omim) for
pF1KB6407
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6407, 306 aa
1>>>pF1KB6407 306 - 306 aa - 306 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5703+/-0.00042; mu= 14.0347+/- 0.026
mean_var=68.4671+/-13.787, 0's: 0 Z-trim(110.0): 56 B-trim: 141 in 1/51
Lambda= 0.155001
statistics sampled from 18239 (18295) to 18239 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.587), E-opt: 0.2 (0.215), width: 16
Scan time: 6.970
The best scores are: opt bits E(85289)
NP_060901 (OMIM: 608334) docking protein 5 isoform ( 306) 2068 471.7 7.8e-133
NP_689934 (OMIM: 611402) docking protein 6 [Homo s ( 331) 1513 347.7 1.9e-95
XP_011524177 (OMIM: 611402) PREDICTED: docking pro ( 289) 1482 340.7 2.1e-93
XP_011527206 (OMIM: 608334) PREDICTED: docking pro ( 198) 1336 308.0 1e-83
NP_808874 (OMIM: 608334) docking protein 5 isoform ( 198) 1336 308.0 1e-83
NP_001317485 (OMIM: 608333) docking protein 4 isof ( 365) 1243 287.3 3.1e-77
NP_060580 (OMIM: 608333) docking protein 4 isoform ( 326) 1242 287.0 3.3e-77
XP_005256100 (OMIM: 608333) PREDICTED: docking pro ( 326) 1242 287.0 3.3e-77
XP_016881099 (OMIM: 611402) PREDICTED: docking pro ( 223) 914 213.6 2.9e-55
XP_016881100 (OMIM: 611402) PREDICTED: docking pro ( 223) 914 213.6 2.9e-55
NP_001305795 (OMIM: 602919) docking protein 1 isof ( 342) 226 59.9 8.5e-09
NP_001184189 (OMIM: 602919) docking protein 1 isof ( 342) 226 59.9 8.5e-09
NP_001305796 (OMIM: 602919) docking protein 1 isof ( 470) 226 59.9 1.1e-08
NP_001372 (OMIM: 602919) docking protein 1 isoform ( 481) 226 59.9 1.1e-08
XP_005273737 (OMIM: 604997) PREDICTED: docking pro ( 318) 223 59.2 1.3e-08
NP_003965 (OMIM: 604997) docking protein 2 isoform ( 412) 223 59.2 1.6e-08
NP_958728 (OMIM: 604997) docking protein 2 isoform ( 258) 208 55.8 1.1e-07
NP_001304729 (OMIM: 604997) docking protein 2 isof ( 258) 208 55.8 1.1e-07
XP_011532959 (OMIM: 611435) PREDICTED: docking pro ( 338) 183 50.2 6.6e-06
XP_016865372 (OMIM: 611435) PREDICTED: docking pro ( 395) 183 50.3 7.6e-06
XP_005266042 (OMIM: 611435) PREDICTED: docking pro ( 440) 183 50.3 8.3e-06
NP_001295164 (OMIM: 611435) docking protein 3 isof ( 440) 183 50.3 8.3e-06
XP_011532958 (OMIM: 611435) PREDICTED: docking pro ( 440) 183 50.3 8.3e-06
NP_001295165 (OMIM: 611435) docking protein 3 isof ( 440) 183 50.3 8.3e-06
XP_011532956 (OMIM: 611435) PREDICTED: docking pro ( 440) 183 50.3 8.3e-06
XP_011532957 (OMIM: 611435) PREDICTED: docking pro ( 440) 183 50.3 8.3e-06
NP_079148 (OMIM: 611435) docking protein 3 isoform ( 496) 183 50.3 9.2e-06
XP_016865682 (OMIM: 607744) PREDICTED: fibroblast ( 455) 173 48.1 4e-05
XP_011512557 (OMIM: 607744) PREDICTED: fibroblast ( 492) 173 48.1 4.3e-05
NP_006644 (OMIM: 607744) fibroblast growth factor ( 492) 173 48.1 4.3e-05
XP_011512556 (OMIM: 607744) PREDICTED: fibroblast ( 492) 173 48.1 4.3e-05
NP_001281090 (OMIM: 608334) docking protein 5 isof ( 78) 149 42.4 0.00036
NP_001036020 (OMIM: 607743) fibroblast growth fact ( 508) 157 44.5 0.00053
XP_016874208 (OMIM: 607743) PREDICTED: fibroblast ( 508) 157 44.5 0.00053
XP_016874206 (OMIM: 607743) PREDICTED: fibroblast ( 508) 157 44.5 0.00053
NP_001265285 (OMIM: 607743) fibroblast growth fact ( 508) 157 44.5 0.00053
NP_001265280 (OMIM: 607743) fibroblast growth fact ( 508) 157 44.5 0.00053
NP_001265282 (OMIM: 607743) fibroblast growth fact ( 508) 157 44.5 0.00053
NP_006645 (OMIM: 607743) fibroblast growth factor ( 508) 157 44.5 0.00053
NP_001265286 (OMIM: 607743) fibroblast growth fact ( 508) 157 44.5 0.00053
XP_016874207 (OMIM: 607743) PREDICTED: fibroblast ( 508) 157 44.5 0.00053
NP_001265284 (OMIM: 607743) fibroblast growth fact ( 508) 157 44.5 0.00053
NP_001265283 (OMIM: 607743) fibroblast growth fact ( 508) 157 44.5 0.00053
NP_775931 (OMIM: 208150,254300,610285) protein Dok ( 504) 139 40.5 0.0086
>>NP_060901 (OMIM: 608334) docking protein 5 isoform a [ (306 aa)
initn: 2068 init1: 2068 opt: 2068 Z-score: 2505.8 bits: 471.7 E(85289): 7.8e-133
Smith-Waterman score: 2068; 100.0% identity (100.0% similar) in 306 aa overlap (1-306:1-306)
10 20 30 40 50 60
pF1KB6 MASNFNDIVKQGYVRIRSRRLGIYQRCWLVFKKASSKGPKRLEKFSDERAAYFRCYHKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MASNFNDIVKQGYVRIRSRRLGIYQRCWLVFKKASSKGPKRLEKFSDERAAYFRCYHKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELNNVKNVARLPKSTKKHAIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ELNNVKNVARLPKSTKKHAIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGEPDLLATGVEREQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LGEPDLLATGVEREQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERLLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERLLQS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 VKNSMLQMKMSERAASLSTMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VKNSMLQMKMSERAASLSTMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFP
250 260 270 280 290 300
pF1KB6 AYRSEH
::::::
NP_060 AYRSEH
>>NP_689934 (OMIM: 611402) docking protein 6 [Homo sapie (331 aa)
initn: 1469 init1: 1469 opt: 1513 Z-score: 1834.5 bits: 347.7 E(85289): 1.9e-95
Smith-Waterman score: 1513; 70.1% identity (89.6% similar) in 308 aa overlap (1-306:1-307)
10 20 30 40 50 60
pF1KB6 MASNFNDIVKQGYVRIRSRRLGIYQRCWLVFKKASSKGPKRLEKFSDERAAYFRCYHKVT
::::::::::::::.::::.:::..::::::::::::::.::::: ::.::::: .::::
NP_689 MASNFNDIVKQGYVKIRSRKLGIFRRCWLVFKKASSKGPRRLEKFPDEKAAYFRNFHKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELNNVKNVARLPKSTKKHAIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDIS
::.:.::..:::. :::::..: :.:.:::::::::.:::.:::: : :::.:::.::::
NP_689 ELHNIKNITRLPRETKKHAVAIIFHDETSKTFACESELEAEEWCKHLCMECLGTRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGEPDLLATGVEREQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWP
::::::::.::.:::.:::::::::.::::..:::..:::.: : :::..: .:::. ::
NP_689 LGEPDLLAAGVQREQNERFNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWP
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 LSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERL-LQ
::.:::::::.::::::.::::.:::::: ::::.:: ::::::::.:::::::::: :.
NP_689 LSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 SVKNSMLQMKMSERAASLSTMVPLPRSAYWQHITRQHSTGQLYRLQDVS-SPLKLHRTET
... :: ...: .:: . :::::::.:::::.:.:..: :: . . :. :..:
NP_689 MEQKARLQTSLTE-PMTLSKSISLPRSAYWHHITRQNSVGEIYSLQGHGFGSSKMSRAQT
250 260 270 280 290
300
pF1KB6 FPAYRSEH
::.: :.
NP_689 FPSYAPEQSEEAQQPLSRSSSYGFSYSSSLIQ
300 310 320 330
>>XP_011524177 (OMIM: 611402) PREDICTED: docking protein (289 aa)
initn: 1502 init1: 1470 opt: 1482 Z-score: 1797.9 bits: 340.7 E(85289): 2.1e-93
Smith-Waterman score: 1482; 72.7% identity (91.0% similar) in 289 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KB6 MASNFNDIVKQGYVRIRSRRLGIYQRCWLVFKKASSKGPKRLEKFSDERAAYFRCYHKVT
::::::::::::::.::::.:::..::::::::::::::.::::: ::.::::: .::::
XP_011 MASNFNDIVKQGYVKIRSRKLGIFRRCWLVFKKASSKGPRRLEKFPDEKAAYFRNFHKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELNNVKNVARLPKSTKKHAIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDIS
::.:.::..:::. :::::..: :.:.:::::::::.:::.:::: : :::.:::.::::
XP_011 ELHNIKNITRLPRETKKHAVAIIFHDETSKTFACESELEAEEWCKHLCMECLGTRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGEPDLLATGVEREQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWP
::::::::.::.:::.:::::::::.::::..:::..:::.: : :::..: .:::. ::
XP_011 LGEPDLLAAGVQREQNERFNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWP
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 LSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERL-LQ
::.:::::::.::::::.::::.:::::: ::::.:: ::::::::.:::::::::: :.
XP_011 LSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 SVKNSMLQMKMSERAASLSTMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETF
... :: ...: .:: . :::::::.:::::.:.:..: :: :
XP_011 MEQKARLQTSLTE-PMTLSKSISLPRSAYWHHITRQNSVGEIYSLQGKSL
250 260 270 280
300
pF1KB6 PAYRSEH
>>XP_011527206 (OMIM: 608334) PREDICTED: docking protein (198 aa)
initn: 1336 init1: 1336 opt: 1336 Z-score: 1624.0 bits: 308.0 E(85289): 1e-83
Smith-Waterman score: 1336; 100.0% identity (100.0% similar) in 198 aa overlap (109-306:1-198)
80 90 100 110 120 130
pF1KB6 AIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDISLGEPDLLATGVEREQSER
::::::::::::::::::::::::::::::
XP_011 MECVGTRINDISLGEPDLLATGVEREQSER
10 20 30
140 150 160 170 180 190
pF1KB6 FNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEA
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 GRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERLLQSVKNSMLQMKMSERAASLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERLLQSVKNSMLQMKMSERAASLS
100 110 120 130 140 150
260 270 280 290 300
pF1KB6 TMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFPAYRSEH
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFPAYRSEH
160 170 180 190
>>NP_808874 (OMIM: 608334) docking protein 5 isoform b [ (198 aa)
initn: 1336 init1: 1336 opt: 1336 Z-score: 1624.0 bits: 308.0 E(85289): 1e-83
Smith-Waterman score: 1336; 100.0% identity (100.0% similar) in 198 aa overlap (109-306:1-198)
80 90 100 110 120 130
pF1KB6 AIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDISLGEPDLLATGVEREQSER
::::::::::::::::::::::::::::::
NP_808 MECVGTRINDISLGEPDLLATGVEREQSER
10 20 30
140 150 160 170 180 190
pF1KB6 FNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_808 FNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEA
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 GRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERLLQSVKNSMLQMKMSERAASLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_808 GRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERLLQSVKNSMLQMKMSERAASLS
100 110 120 130 140 150
260 270 280 290 300
pF1KB6 TMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFPAYRSEH
::::::::::::::::::::::::::::::::::::::::::::::::
NP_808 TMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFPAYRSEH
160 170 180 190
>>NP_001317485 (OMIM: 608333) docking protein 4 isoform (365 aa)
initn: 1238 init1: 1176 opt: 1243 Z-score: 1507.5 bits: 287.3 E(85289): 3.1e-77
Smith-Waterman score: 1243; 62.0% identity (84.9% similar) in 292 aa overlap (1-290:1-292)
10 20 30 40 50 60
pF1KB6 MASNFNDIVKQGYVRIRSRRLGIYQRCWLVFKKASSKGPKRLEKFSDERAAYFRCYHKVT
::.::.::::::::...::.::::.::::::.:.:::::.::::. ::... .: :::
NP_001 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELNNVKNVARLPKSTKKHAIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDIS
:..::: :.:::: ::..:..: :.::...::.:.:.:::.:: :.:..::.:.:.::::
NP_001 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGEPDLLATGVEREQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWP
:::::::: ::. ::..::::.:.: :::::.::: ::::.: : :::..::::::.:::
NP_001 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 LSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHER-LLQ
: .:::::::.: :::::::::..::::. :::..:: :::.::::.:::::::.: ::.
NP_001 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 SVKNSMLQMKMSERAASLSTMVP-LPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTET
:: : : .:. . : . :::::::.::: ... .. : :
NP_001 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGESLPCPTPTCQE
250 260 270 280 290 300
300
pF1KB6 FPAYRSEH
NP_001 ALWRMRPIGQGSFDLALSSEPASVPTGEGYGAAQASSETDLLNRFILLKPKPSQGDSSEA
310 320 330 340 350 360
>>NP_060580 (OMIM: 608333) docking protein 4 isoform 1 [ (326 aa)
initn: 1238 init1: 1176 opt: 1242 Z-score: 1507.1 bits: 287.0 E(85289): 3.3e-77
Smith-Waterman score: 1242; 65.1% identity (87.6% similar) in 275 aa overlap (1-273:1-275)
10 20 30 40 50 60
pF1KB6 MASNFNDIVKQGYVRIRSRRLGIYQRCWLVFKKASSKGPKRLEKFSDERAAYFRCYHKVT
::.::.::::::::...::.::::.::::::.:.:::::.::::. ::... .: :::
NP_060 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELNNVKNVARLPKSTKKHAIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDIS
:..::: :.:::: ::..:..: :.::...::.:.:.:::.:: :.:..::.:.:.::::
NP_060 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGEPDLLATGVEREQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWP
:::::::: ::. ::..::::.:.: :::::.::: ::::.: : :::..::::::.:::
NP_060 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 LSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHER-LLQ
: .:::::::.: :::::::::..::::. :::..:: :::.::::.:::::::.: ::.
NP_060 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 SVKNSMLQMKMSERAASLSTMVP-LPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTET
:: : : .:. . : . :::::::.:::
NP_060 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
250 260 270 280 290 300
300
pF1KB6 FPAYRSEH
NP_060 DLLNRFILLKPKPSQGDSSEAKTPSQ
310 320
>>XP_005256100 (OMIM: 608333) PREDICTED: docking protein (326 aa)
initn: 1238 init1: 1176 opt: 1242 Z-score: 1507.1 bits: 287.0 E(85289): 3.3e-77
Smith-Waterman score: 1242; 65.1% identity (87.6% similar) in 275 aa overlap (1-273:1-275)
10 20 30 40 50 60
pF1KB6 MASNFNDIVKQGYVRIRSRRLGIYQRCWLVFKKASSKGPKRLEKFSDERAAYFRCYHKVT
::.::.::::::::...::.::::.::::::.:.:::::.::::. ::... .: :::
XP_005 MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 ELNNVKNVARLPKSTKKHAIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDIS
:..::: :.:::: ::..:..: :.::...::.:.:.:::.:: :.:..::.:.:.::::
XP_005 EISNVKCVTRLPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LGEPDLLATGVEREQSERFNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWP
:::::::: ::. ::..::::.:.: :::::.::: ::::.: : :::..::::::.:::
XP_005 LGEPDLLAPGVQCEQTDRFNVFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWP
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 LSALRRYGRDTTWFTFEAGRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHER-LLQ
: .:::::::.: :::::::::..::::. :::..:: :::.::::.:::::::.: ::.
XP_005 LCSLRRYGRDATRFTFEAGRMCDAGEGLYTFQTQEGEQIYQRVHSATLAIAEQHKRVLLE
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 SVKNSMLQMKMSERAASLSTMVP-LPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTET
:: : : .:. . : . :::::::.:::
XP_005 MEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNIAEASSYAGEGYGAAQASSET
250 260 270 280 290 300
300
pF1KB6 FPAYRSEH
XP_005 DLLNRFILLKPKPSQGDSSEAKTPSQ
310 320
>>XP_016881099 (OMIM: 611402) PREDICTED: docking protein (223 aa)
initn: 870 init1: 870 opt: 914 Z-score: 1113.2 bits: 213.6 E(85289): 2.9e-55
Smith-Waterman score: 914; 66.0% identity (87.0% similar) in 200 aa overlap (109-306:1-199)
80 90 100 110 120 130
pF1KB6 AIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDISLGEPDLLATGVEREQSER
:::.:::.::::::::::::.::.:::.::
XP_016 MECLGTRLNDISLGEPDLLAAGVQREQNER
10 20 30
140 150 160 170 180 190
pF1KB6 FNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEA
:::::::.::::..:::..:::.: : :::..: .:::. ::::.:::::::.::::::.
XP_016 FNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFES
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 GRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERL-LQSVKNSMLQMKMSERAASL
::::.:::::: ::::.:: ::::::::.:::::::::: :. ... :: ...: .:
XP_016 GRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTE-PMTL
100 110 120 130 140
260 270 280 290 300
pF1KB6 STMVPLPRSAYWQHITRQHSTGQLYRLQDVS-SPLKLHRTETFPAYRSEH
: . :::::::.:::::.:.:..: :: . . :. :..:::.: :.
XP_016 SKSISLPRSAYWHHITRQNSVGEIYSLQGHGFGSSKMSRAQTFPSYAPEQSEEAQQPLSR
150 160 170 180 190 200
XP_016 SSSYGFSYSSSLIQ
210 220
>>XP_016881100 (OMIM: 611402) PREDICTED: docking protein (223 aa)
initn: 870 init1: 870 opt: 914 Z-score: 1113.2 bits: 213.6 E(85289): 2.9e-55
Smith-Waterman score: 914; 66.0% identity (87.0% similar) in 200 aa overlap (109-306:1-199)
80 90 100 110 120 130
pF1KB6 AIGIYFNDDTSKTFACESDLEADEWCKVLQMECVGTRINDISLGEPDLLATGVEREQSER
:::.:::.::::::::::::.::.:::.::
XP_016 MECLGTRLNDISLGEPDLLAAGVQREQNER
10 20 30
140 150 160 170 180 190
pF1KB6 FNVYLMPSPNLDVHGECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDTTWFTFEA
:::::::.::::..:::..:::.: : :::..: .:::. ::::.:::::::.::::::.
XP_016 FNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFES
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 GRMCETGEGLFIFQTRDGEAIYQKVHSAALAIAEQHERL-LQSVKNSMLQMKMSERAASL
::::.:::::: ::::.:: ::::::::.:::::::::: :. ... :: ...: .:
XP_016 GRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTE-PMTL
100 110 120 130 140
260 270 280 290 300
pF1KB6 STMVPLPRSAYWQHITRQHSTGQLYRLQDVS-SPLKLHRTETFPAYRSEH
: . :::::::.:::::.:.:..: :: . . :. :..:::.: :.
XP_016 SKSISLPRSAYWHHITRQNSVGEIYSLQGHGFGSSKMSRAQTFPSYAPEQSEEAQQPLSR
150 160 170 180 190 200
XP_016 SSSYGFSYSSSLIQ
210 220
306 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:44:29 2016 done: Sat Nov 5 18:44:30 2016
Total Scan time: 6.970 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]