Result of FASTA (ccds) for
pF1KB6402
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6402, 333 aa
1>>>pF1KB6402 333 - 333 aa - 333 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4280+/-0.000924; mu= 15.2131+/- 0.055
mean_var=67.2782+/-13.301, 0's: 0 Z-trim(105.5): 25 B-trim: 0 in 0/50
Lambda= 0.156364
statistics sampled from 8463 (8481) to 8463 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.261), width: 16
Scan time: 2.110
The best scores are: opt bits E(32554)
CCDS6675.1 CTSL gene_id:1514|Hs108|chr9 ( 333) 2321 532.6 1.7e-151
CCDS6723.1 CTSV gene_id:1515|Hs108|chr9 ( 334) 1836 423.2 1.5e-118
CCDS969.1 CTSK gene_id:1513|Hs108|chr1 ( 329) 1131 264.1 1.1e-70
CCDS968.1 CTSS gene_id:1520|Hs108|chr1 ( 331) 1101 257.4 1.2e-68
CCDS55634.1 CTSS gene_id:1520|Hs108|chr1 ( 281) 796 188.5 5.4e-48
CCDS10308.1 CTSH gene_id:1512|Hs108|chr15 ( 335) 796 188.6 6.3e-48
CCDS8144.1 CTSF gene_id:8722|Hs108|chr11 ( 484) 664 158.9 7.9e-39
CCDS3794.1 CTSO gene_id:1519|Hs108|chr4 ( 321) 484 118.2 9.3e-27
CCDS8117.1 CTSW gene_id:1521|Hs108|chr11 ( 376) 395 98.1 1.2e-20
CCDS8282.1 CTSC gene_id:1075|Hs108|chr11 ( 463) 386 96.1 5.8e-20
CCDS13474.1 CTSZ gene_id:1522|Hs108|chr20 ( 303) 305 77.8 1.3e-14
>>CCDS6675.1 CTSL gene_id:1514|Hs108|chr9 (333 aa)
initn: 2321 init1: 2321 opt: 2321 Z-score: 2833.2 bits: 532.6 E(32554): 1.7e-151
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKN
250 260 270 280 290 300
310 320 330
pF1KB6 SWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
:::::::::::::::::::::::::::::::::
CCDS66 SWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
310 320 330
>>CCDS6723.1 CTSV gene_id:1515|Hs108|chr9 (334 aa)
initn: 1824 init1: 1251 opt: 1836 Z-score: 2241.9 bits: 423.2 E(32554): 1.5e-118
Smith-Waterman score: 1836; 77.2% identity (91.0% similar) in 334 aa overlap (1-333:1-334)
10 20 30 40 50 60
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIE
:: .:.:::::::::::. ::..:...: .::: : :::: ::::::::::::::::::
CCDS67 MNLSLVLAAFCLGIASAVPKFDQNLDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDW
::: :: .:::.::::::::::::.:::::.:. :.:.: ::::::.:::: . :.::::
CCDS67 LHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFREPLFLDLPKSVDW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNG
:.:::::::::: :::::::::::::::::::::::.:.::::::::::: ::::.::::
CCDS67 RKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNG
130 140 150 160 170 180
190 200 210 220 230
pF1KB6 GLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDI-PKQEKALMKAV
:.: :::::..:::::::::::: :..: ::: :. ::::::::. . : .::::::::
CCDS67 GFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 ATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVK
:::::::::.:::: :: ::: ::::::::::...::::::::::::...:.:.::::::
CCDS67 ATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVK
250 260 270 280 290 300
300 310 320 330
pF1KB6 NSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
:::: ::: .::::.:::. ::::::.:::::.:
CCDS67 NSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV
310 320 330
>>CCDS969.1 CTSK gene_id:1513|Hs108|chr1 (329 aa)
initn: 887 init1: 321 opt: 1131 Z-score: 1382.5 bits: 264.1 E(32554): 1.1e-70
Smith-Waterman score: 1131; 50.9% identity (76.7% similar) in 330 aa overlap (7-331:4-327)
10 20 30 40 50
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMI
: .. : ..: .: .. :...: :: : . :. . .: :: .::::.:.:
CCDS96 MWGLKVLLLPVVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYI
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQN--RKPRKGKVFQEPLFY-EAPR
.:: : : :.. .::: .::::::: : :.:.. . :.. .. : . .::
CCDS96 SIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 SVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE
:::.:.::::::::::::::::::::..::::::. .:::.:..:: :::::: . :.
CCDS96 SVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--ND
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKAL
::.:: : :::::: : :.:::..::: . :::: ::: ..:. :. .::. .::::
CCDS96 GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKAL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 MKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKY
.::: :::.::::::. :: ::..:.:.. .:.:....:.::.::::... .::.
CCDS96 KRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK----GNKH
240 250 260 270 280 290
300 310 320 330
pF1KB6 WLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
:..::::::.:: ::. ::... : ::::. ::.:
CCDS96 WIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM
300 310 320
>>CCDS968.1 CTSS gene_id:1520|Hs108|chr1 (331 aa)
initn: 937 init1: 293 opt: 1101 Z-score: 1345.8 bits: 257.4 E(32554): 1.2e-68
Smith-Waterman score: 1101; 49.7% identity (75.6% similar) in 328 aa overlap (15-333:14-331)
10 20 30 40 50
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMI
: : : : .:. .: :: ... : :::. :: .::::.:..
CCDS96 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFV
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEA-----
::: :. : ::. ..:: .::::::: ..:... : : . .:. . :..
CCDS96 MLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSL--RVPSQ---WQRNITYKSNPNRI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 -PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ
: :::::::: :: :: ::.::.::::::.::::.:. :::.:.::: ::::::: .
CCDS96 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 -GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-Q
::.:::::.: ::::. :: :.::. ::::.: ...:.:. :: .:. . ....: .
CCDS96 YGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGR
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 EKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESD
: .: .:::. ::.::..:: : ::..:. :.:.::.:. ....::::::::: . .
CCDS96 EDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT-QNVNHGVLVVGYG----DLN
240 250 260 270 280
300 310 320 330
pF1KB6 NNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
...:::::::::...: ::..::... ::::::: ::: .
CCDS96 GKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
290 300 310 320 330
>>CCDS55634.1 CTSS gene_id:1520|Hs108|chr1 (281 aa)
initn: 643 init1: 273 opt: 796 Z-score: 975.1 bits: 188.5 E(32554): 5.4e-48
Smith-Waterman score: 895; 43.5% identity (66.5% similar) in 322 aa overlap (15-333:14-281)
10 20 30 40 50
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMI
: : : : .:. .: :: ... : :::. :: .::::.:..
CCDS55 MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFV
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVD
::: :. : ::. ..:: .:::
CCDS55 MLHNLEHSMGMHSYDLGMNHLGDM------------------------------------
60 70 80
120 130 140 150 160 170
pF1KB6 WREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGC
:.::.::::::.::::.:. :::.:.::: ::::::: . ::.::
CCDS55 -------------GSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGC
90 100 110 120 130
180 190 200 210 220 230
pF1KB6 NGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMK
:::.: ::::. :: :.::. ::::.: ...:.:. :: .:. . ....: .: .: .
CCDS55 NGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKE
140 150 160 170 180 190
240 250 260 270 280 290
pF1KB6 AVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWL
:::. ::.::..:: : ::..:. :.:.::.:. ....::::::::: . ....:::
CCDS55 AVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT-QNVNHGVLVVGYG----DLNGKEYWL
200 210 220 230 240
300 310 320 330
pF1KB6 VKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
::::::...: ::..::... ::::::: ::: .
CCDS55 VKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI
250 260 270 280
>>CCDS10308.1 CTSH gene_id:1512|Hs108|chr15 (335 aa)
initn: 576 init1: 379 opt: 796 Z-score: 973.9 bits: 188.6 E(32554): 6.3e-48
Smith-Waterman score: 796; 39.4% identity (68.2% similar) in 343 aa overlap (3-331:6-331)
10 20 30 40 50
pF1KB6 MNPTLILAAFCLGI---ASATLTFDHSLEA-QWTKWKAMHNRLYGMNEEGWRRAVWE
: : .:. ::. ..: : . ::: .. .: . : . :. .: : ..
CCDS10 MWATLPLLCAGAWLLGVPVCGAAELCVN-SLEKFHFKSWMSKHRKTYSTEEYHHRLQTFA
10 20 30 40 50
60 70 80 90 100 110
pF1KB6 KNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQ--VMNGFQNRKPRKGKVFQEPLF
.: . :. ::. :.:.: ::.: :.::. :... . . :: . :.. ..
CCDS10 SNWRKINAHNN----GNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB6 YEAPRSVDWREKG-YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCS
: : :::::.:: .:.:::::: :::::.::.:::::. . ::...::.::.::::.
CCDS10 Y--PPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCA
120 130 140 150 160 170
180 190 200 210 220
pF1KB6 GPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFV-DIP
.:.::.::: . ::.:. : :. .:..:::.. . ::..: .. ::: :.
CCDS10 QDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAI----GFVKDVA
180 190 200 210 220
230 240 250 260 270 280
pF1KB6 K----QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDC--SSEDMDHGVLVVGY
. .:.:...::: .:.: :... .. :..:. ::: .: . . ..:.::.:::
CCDS10 NITIYDEEAMVEAVALYNPVSFAFEVTQD-FMMYRTGIYSSTSCHKTPDKVNHAVLAVGY
230 240 250 260 270 280
290 300 310 320 330
pF1KB6 GFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
: :... ::.:::::: .:::.:: . . . : ::.:. ::::
CCDS10 G----EKNGIPYWIVKNSWGPQWGMNGYFLIERGK-NMCGLAACASYPIPLV
290 300 310 320 330
>>CCDS8144.1 CTSF gene_id:8722|Hs108|chr11 (484 aa)
initn: 632 init1: 264 opt: 664 Z-score: 810.6 bits: 158.9 E(32554): 7.9e-39
Smith-Waterman score: 664; 38.4% identity (65.6% similar) in 302 aa overlap (36-333:194-483)
10 20 30 40 50 60
pF1KB6 ILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEG-WRRAVWEKNMKMIELHNQ
.:: : .::. :: .:. .:: . . :
CCDS81 SSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ-KIQ
170 180 190 200 210 220
70 80 90 100 110 120
pF1KB6 EYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYE-APRSVDWREK
.: .. ... :.:.: :::: .. . :: .:. : . :: ::: :
CCDS81 ALDRGTAQY--GVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSK
230 240 250 260 270 280
130 140 150 160 170 180
pF1KB6 GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLM
: :: ::.::.::::::::.:: .::: : . : :.:::::.:.::. . ...: :::
CCDS81 GAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD--KMDKACMGGLP
290 300 310 320 330
190 200 210 220 230 240
pF1KB6 DYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVG
. :.. ... :::..:..: :.. .::... . . . . :.. ..:. : .: :
CCDS81 SNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRG
340 350 360 370 380 390
250 260 270 280 290 300
pF1KB6 PISVAIDAGHESFLFYKEGIY--FEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNS
::::::.: .. ::..:: ..: :: .::.::.:::: .: . .: .:::
CCDS81 PISVAINA--FGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRS----DVPFWAIKNS
400 410 420 430 440 450
310 320 330
pF1KB6 WGEEWGMGGYVKMAKDRRNHCGIASAASYPTV
:: .:: :: . . . ::. . :: .:
CCDS81 WGTDWGEKGYYYLHRGS-GACGVNTMASSAVVD
460 470 480
>>CCDS3794.1 CTSO gene_id:1519|Hs108|chr4 (321 aa)
initn: 441 init1: 188 opt: 484 Z-score: 593.8 bits: 118.2 E(32554): 9.3e-27
Smith-Waterman score: 484; 35.4% identity (61.3% similar) in 274 aa overlap (68-329:61-317)
40 50 60 70 80 90
pF1KB6 RLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQN
:.. .: ...: :. . :::. . .
CCDS37 PTWPRSREREAAAFRESLNRHRYLNSLFPSENSTAF-YGINQFSYLFPEEFKAI---YLR
40 50 60 70 80
100 110 120 130 140 150
pF1KB6 RKPRKGKVFQEPLFYEAPR-----SVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMF
:: : .. . . : :::.: :: :.:: .::.:::::..::.:. .
CCDS37 SKPSKFPRYSAEVHMSIPNVSLPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYA
90 100 110 120 130 140
160 170 180 190 200 210
pF1KB6 RKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNG-GLDSEESYPYEATEESC
: : .:: :...::: .: ::::: :..... : .. ::..: . :
CCDS37 IKGKPLEDLSVQQVIDCS--YNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLC
150 160 170 180 190 200
220 230 240 250 260
pF1KB6 KY----NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEP
.: . .:. . ... :. :: . ::. : ::. : .:: :. : :: ..
CCDS37 HYFSGSHSGFSIKGYSAY-DFSDQEDEMAKALLTFGPLVVIVDA--VSWQDYLGGI-IQH
210 220 230 240 250 260
270 280 290 300 310 320
pF1KB6 DCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGY--VKMAKDRRNHCGIA
::: . .:.::.. ::..: : . ::.:.:::: ::. :: :::.. : ::::
CCDS37 HCSSGEANHAVLIT--GFDKTGS--TPYWIVRNSWGSSWGVDGYAHVKMGS---NVCGIA
270 280 290 300 310
330
pF1KB6 SAASYPTV
...:
CCDS37 DSVSSIFV
320
>>CCDS8117.1 CTSW gene_id:1521|Hs108|chr11 (376 aa)
initn: 367 init1: 174 opt: 395 Z-score: 484.3 bits: 98.1 E(32554): 1.2e-20
Smith-Waterman score: 477; 30.7% identity (59.8% similar) in 326 aa overlap (25-324:38-354)
10 20 30 40 50
pF1KB6 MNPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRA-VWE
:. . .. . :: : :: .: ..
CCDS81 SCLLALLVAGLAQGIRGPLRAQDLGPQPLELKEAFKLFQIQFNRSYLSPEEHAHRLDIFA
10 20 30 40 50 60
60 70 80 90 100
pF1KB6 KNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRK---PRKGK-VFQEP
.:. . . . :: : : ... :.:.: ::: : . :.. : :. . .:
CCDS81 HNLAQAQ-RLQEEDLGTAEF--GVTPFSDLTEEEFGQ-LYGYRRAAGGVPSMGREIRSEE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 LFYEAPRSVDWRE-KGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVD
.: : :::. . ..:.:.: .:. :::..:.: .: . ....: :.:.:
CCDS81 PEESVPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLD
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 CSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPK--YSVANDTGFV
: : :. ::.::.. :: : .:.:: ::..::... .. . .:: .:: :.
CCDS81 C-GRCGD-GCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFI
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 DIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIY-FEPD-CSSEDMDHGVLVVGYG
. ..:. . . .:: :::.:.:. . . .:..:. : :. . .::.::.::.:
CCDS81 MLQNNEHRIAQYLATYGPITVTINM--KPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFG
250 260 270 280 290
290 300 310 320
pF1KB6 FESTE--------SDNNK--------YWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAA
..: :.... ::..::::: .:: :: .. . : :::
CCDS81 SVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGS-NTCGITKFP
300 310 320 330 340 350
330
pF1KB6 SYPTV
CCDS81 LTARVQKPDMKPRVSCPP
360 370
>>CCDS8282.1 CTSC gene_id:1075|Hs108|chr11 (463 aa)
initn: 341 init1: 165 opt: 386 Z-score: 471.9 bits: 96.1 E(32554): 5.8e-20
Smith-Waterman score: 436; 31.4% identity (59.0% similar) in 334 aa overlap (32-328:134-454)
10 20 30 40 50 60
pF1KB6 NPTLILAAFCLGIASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIEL
: . .. : :. . . . .. .
CCDS82 FFKYKEEGSKVTTYCNETMTGWVHDVLGRNWACFTGKKVGTASENVYVNIAHLKNSQEKY
110 120 130 140 150 160
70 80 90 100
pF1KB6 HNQEYREGKHSFTMAMNAFGD----MTSEEFRQVM-------NGFQNRK-PRKGKV----
:. :. :.:. :.::. : :.. . .: ..:: :: .
CCDS82 SNRLYKYD-HNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTA
170 180 190 200 210 220
110 120 130 140 150
pF1KB6 -FQEPLFYEAPRSVDWRE-KG--YVTPVKNQGQCGSCWAFSATGALEGQM--FRKTGRLI
.:. ... : : :::. .: .:.::.::..::::..:.. : ::... . ....
CCDS82 EIQQKILH-LPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTP
230 240 250 260 270 280
160 170 180 190 200 210
pF1KB6 SLSEQNLVDCSGPQGNEGCNGGL-MDYAFQYVQDNGGLDSEESYPYEATEESCK------
:: :..:.:: : .::.::. . : .:.:: : : : .:: .:. ::
CCDS82 ILSPQEVVSCS--QYAQGCEGGFPYLIAGKYAQDFG-LVEEACFPYTGTDSPCKMKEDCF
290 300 310 320 330
220 230 240 250 260
pF1KB6 --YNPKYSVANDTGFVDIPKQEKALMK-AVATVGPISVAIDAGHESFLFYKEGIYF----
:. .: .. :: ..:::: .. ::..::... ...:: ::.:::
CCDS82 RYYSSEYHYVG--GFYG--GCNEALMKLELVHHGPMAVAFEV-YDDFLHYKKGIYHHTGL
340 350 360 370 380 390
270 280 290 300 310 320
pF1KB6 -EPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGI
.: : .:.::.:::: .: ... ::.:::::: :: .:: .. . ..:.:
CCDS82 RDPFNPFELTNHAVLLVGYGTDS--ASGMDYWIVKNSWGTGWGENGYFRIRRGT-DECAI
400 410 420 430 440 450
330
pF1KB6 ASAASYPTV
: :
CCDS82 ESIAVAATPIPKL
460
333 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:49:15 2016 done: Fri Nov 4 20:49:15 2016
Total Scan time: 2.110 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]