Result of FASTA (omim) for
pF1KB6385
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6385, 273 aa
1>>>pF1KB6385 273 - 273 aa - 273 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2378+/-0.00038; mu= 14.7934+/- 0.024
mean_var=59.2877+/-11.964, 0's: 0 Z-trim(112.4): 50 B-trim: 745 in 1/48
Lambda= 0.166568
statistics sampled from 21285 (21335) to 21285 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.25), width: 16
Scan time: 7.100
The best scores are: opt bits E(85289)
NP_002792 (OMIM: 176847) proteasome subunit beta t ( 273) 1764 432.3 4.6e-121
NP_002790 (OMIM: 604030) proteasome subunit beta t ( 277) 1086 269.4 5.2e-72
NP_002791 (OMIM: 177045) proteasome subunit beta t ( 219) 335 88.9 9.1e-18
NP_002789 (OMIM: 600307) proteasome subunit beta t ( 239) 328 87.2 3.1e-17
NP_001257410 (OMIM: 600307) proteasome subunit bet ( 213) 296 79.5 5.9e-15
NP_683720 (OMIM: 177046,256040) proteasome subunit ( 276) 288 77.6 2.8e-14
NP_004150 (OMIM: 177046,256040) proteasome subunit ( 272) 285 76.9 4.5e-14
NP_002788 (OMIM: 600306) proteasome subunit beta t ( 263) 280 75.7 1e-13
NP_001093250 (OMIM: 611137) proteasome subunit bet ( 300) 277 75.0 1.9e-13
XP_005267928 (OMIM: 600306) PREDICTED: proteasome ( 169) 201 56.6 3.6e-08
NP_001138404 (OMIM: 600306) proteasome subunit bet ( 203) 201 56.6 4.2e-08
NP_001096137 (OMIM: 176846) proteasome subunit alp ( 261) 196 55.5 1.2e-07
NP_002780 (OMIM: 176846) proteasome subunit alpha ( 261) 196 55.5 1.2e-07
NP_001317605 (OMIM: 176846) proteasome subunit alp ( 261) 196 55.5 1.2e-07
NP_002783 (OMIM: 606607) proteasome subunit alpha ( 248) 187 53.3 5.1e-07
NP_001124197 (OMIM: 600306) proteasome subunit bet ( 160) 178 51.1 1.6e-06
NP_001317604 (OMIM: 176846) proteasome subunit alp ( 230) 165 48.0 1.9e-05
NP_002785 (OMIM: 602175) proteasome subunit beta t ( 201) 162 47.3 2.7e-05
NP_001096138 (OMIM: 176846) proteasome subunit alp ( 190) 151 44.6 0.00016
NP_001317602 (OMIM: 176846) proteasome subunit alp ( 174) 146 43.4 0.00035
NP_002784 (OMIM: 602017) proteasome subunit beta t ( 241) 147 43.7 0.00039
NP_001186701 (OMIM: 176844) proteasome subunit alp ( 183) 145 43.2 0.00043
NP_001186703 (OMIM: 176844) proteasome subunit alp ( 183) 145 43.2 0.00043
NP_001186702 (OMIM: 176844) proteasome subunit alp ( 183) 145 43.2 0.00043
NP_002778 (OMIM: 176842) proteasome subunit alpha ( 234) 146 43.5 0.00045
NP_002781 (OMIM: 176844) proteasome subunit alpha ( 241) 145 43.2 0.00055
NP_001186708 (OMIM: 602175) proteasome subunit bet ( 176) 140 42.0 0.00096
NP_002787 (OMIM: 602177) proteasome subunit beta t ( 264) 130 39.6 0.0072
>>NP_002792 (OMIM: 176847) proteasome subunit beta type- (273 aa)
initn: 1764 init1: 1764 opt: 1764 Z-score: 2294.4 bits: 432.3 E(85289): 4.6e-121
Smith-Waterman score: 1764; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KB6 MLKPALEPRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MLKPALEPRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRAT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 NDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 NDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 ILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 FQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPVKRSGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPVKRSGR
190 200 210 220 230 240
250 260 270
pF1KB6 YHFVPGTTAVLTQTVKPLTLELVEETVQAMEVE
:::::::::::::::::::::::::::::::::
NP_002 YHFVPGTTAVLTQTVKPLTLELVEETVQAMEVE
250 260 270
>>NP_002790 (OMIM: 604030) proteasome subunit beta type- (277 aa)
initn: 1116 init1: 987 opt: 1086 Z-score: 1413.8 bits: 269.4 E(85289): 5.2e-72
Smith-Waterman score: 1086; 58.3% identity (86.5% similar) in 266 aa overlap (8-271:10-275)
10 20 30 40 50
pF1KB6 MLKPALEPRGGFSFENCQRNASLERVLP--GLKVPHARKTGTTIAGLVFQDGVILGAD
: :::::.::.::: :: . : :.:..:::::::::.:..::..::::
NP_002 MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGAD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 TRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVA
::::. :::::.: :::::.:.:::::::.:::..:::....:..:::.::::: :::.
NP_002 TRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 TVTRILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALAV
:..:.:.: ::::::..::.:..::::.:::.::...:::: ..::....:::. ::.::
NP_002 TANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 LEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPVK
.::.:.:.: : :..:. ::..:::..:::::.:.: :::.:. .:: . :..
NP_002 FEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGT
190 200 210 220 230 240
240 250 260 270
pF1KB6 RSGRYHFVPGTTAVLTQTVKPLTLELVEETVQAMEVE
: :::. :::::::. . :: .:..:::::.:.
NP_002 RLGRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDTS
250 260 270
>>NP_002791 (OMIM: 177045) proteasome subunit beta type- (219 aa)
initn: 306 init1: 306 opt: 335 Z-score: 440.0 bits: 88.9 E(85289): 9.1e-18
Smith-Waterman score: 335; 30.5% identity (64.5% similar) in 197 aa overlap (28-221:7-202)
10 20 30 40 50
pF1KB6 MLKPALEPRGGFSFENCQRNASLERVLPGLKVPHARK--TGTTIAGLVFQDGVILGADTR
: .:.: . ::::: .. :. ::..:.:.:
NP_002 MLRAGAPTGDLPRAGEVHTGTTIMAVEFDGGVVMGSDSR
10 20 30
60 70 80 90 100 110
pF1KB6 ATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATV
.. .:... .:. . .::: .: ::::. .. :.: ..:::.. . : : ..
NP_002 VSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAA
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB6 TRILRQTLFRYQGHVGASLIVGGVDLT-GPQLYGVHPHGSYSRLPFTALGSGQDAALAVL
. ..:. ..:. ..: :.:.: : : :.::. : .: ::. :::. . .
NP_002 ANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLG-GMLTRQPFAIGGSGSTFIYGYV
100 110 120 130 140 150
180 190 200 210 220 230
pF1KB6 EDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPVKR
. ..:.:. : . . ..:.. .. : .::: . .:: .:
NP_002 DAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTITAAGVDHRVILGNELPKFYD
160 170 180 190 200 210
240 250 260 270
pF1KB6 SGRYHFVPGTTAVLTQTVKPLTLELVEETVQAMEVE
NP_002 E
>>NP_002789 (OMIM: 600307) proteasome subunit beta type- (239 aa)
initn: 286 init1: 245 opt: 328 Z-score: 430.3 bits: 87.2 E(85289): 3.1e-17
Smith-Waterman score: 328; 29.9% identity (65.8% similar) in 187 aa overlap (38-223:33-219)
10 20 30 40 50 60
pF1KB6 PRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVAD
::::: .. :. ::.::::.:.:. : .:.
NP_002 ATLLAARGAGPAPAWGPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIAN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLF
. .:. : .:.:: .: :::.. .. :. .. .:.. .. : : :.. .... .
NP_002 RVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RYQGHVGASLIVGGVD-LTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMT
::. . :..:..: : : :.:.: : . : :. :::.. . .. .. .::
NP_002 RYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPVKRSGRYHFVPG
: . ..:.. .. : .::: . .:...:..
NP_002 KEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIPKFAVATLPPA
190 200 210 220 230
250 260 270
pF1KB6 TTAVLTQTVKPLTLELVEETVQAMEVE
>>NP_001257410 (OMIM: 600307) proteasome subunit beta ty (213 aa)
initn: 243 init1: 222 opt: 296 Z-score: 389.5 bits: 79.5 E(85289): 5.9e-15
Smith-Waterman score: 296; 32.2% identity (66.4% similar) in 152 aa overlap (38-188:33-184)
10 20 30 40 50 60
pF1KB6 PRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVAD
::::: .. :. ::.::::.:.:. : .:.
NP_001 ATLLAARGAGPAPAWGPEAFTPDWESREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIAN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 KSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLF
. .:. : .:.:: .: :::.. .. :. .. .:.. .. : : :.. .... .
NP_001 RVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 RYQGHVGASLIVGGVD-LTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMT
::. . :..:..: : : :.:.: : . : :. :::.. . .. .. .::
NP_001 RYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPVKRSGRYHFVPG
:
NP_001 KEECLQFTANAFFFYPQLSLWPWSGMAPVEE
190 200 210
>>NP_683720 (OMIM: 177046,256040) proteasome subunit bet (276 aa)
initn: 269 init1: 162 opt: 288 Z-score: 377.4 bits: 77.6 E(85289): 2.8e-14
Smith-Waterman score: 288; 29.8% identity (58.2% similar) in 225 aa overlap (1-221:37-255)
10 20
pF1KB6 MLKPALE-PRGGFSFENCQR-NASLERVLP
: .: : ::: : : ... :: .
NP_683 CGAPRGQRPESALPVAGSGRRSDPGHYSFSMRSPELALPRGMQPTEFFQSLGGDGERNVQ
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB6 GLKVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVA
... : ::: .. :: ::: ..:.::. : .. .:. : : . .: :
NP_683 -IEMAH----GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCA
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB6 ADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASL--IVGGVDLTG
:: .. :..:.. .:. : .:.. :......: . . .:.: .: :. .. : : :
NP_683 ADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG-MGLSMGSMICGWDKKG
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB6 PQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDL
: :: : ::. . . :::. : .:... ..::.. : : : .:.. . :
NP_683 PGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDS
190 200 210 220 230 240
210 220 230 240 250 260
pF1KB6 GSGGNVDACVITKTGAKLLRTLSSPTEPVKRSGRYHFVPGTTAVLTQTVKPLTLELVEET
::: :. . . :
NP_683 YSGGVVNMYHMKEDGWVKVESTDVSDLLHQYREANQ
250 260 270
>>NP_004150 (OMIM: 177046,256040) proteasome subunit bet (272 aa)
initn: 269 init1: 162 opt: 285 Z-score: 373.6 bits: 76.9 E(85289): 4.5e-14
Smith-Waterman score: 287; 29.3% identity (58.1% similar) in 222 aa overlap (4-221:42-251)
10 20 30
pF1KB6 MLKPALEPRGGFSFE--NCQRNASLERVLPGLK
:.::: :. . .::...:
NP_004 TPSSWLTSSLLVEAAPLDDTTLPTPVSSGCPGLEPTEFFQSLGGDGERNVQIE-------
20 30 40 50 60
40 50 60 70 80 90
pF1KB6 VPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADA
. : ::: .. :: ::: ..:.::. : .. .:. : : . .: :::
NP_004 MAH----GTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADC
70 80 90 100 110 120
100 110 120 130 140
pF1KB6 EMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASL--IVGGVDLTGPQL
.. :..:.. .:. : .:.. :......: . . .:.: .: :. .. : : :: :
NP_004 QYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRG-MGLSMGSMICGWDKKGPGL
130 140 150 160 170
150 160 170 180 190 200
pF1KB6 YGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSG
: : ::. . . :::. : .:... ..::.. : : : .:.. . : ::
NP_004 YYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSG
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB6 GNVDACVITKTGAKLLRTLSSPTEPVKRSGRYHFVPGTTAVLTQTVKPLTLELVEETVQA
: :. . . :
NP_004 GVVNMYHMKEDGWVKVESTDVSDLLHQYREANQ
240 250 260 270
>>NP_002788 (OMIM: 600306) proteasome subunit beta type- (263 aa)
initn: 267 init1: 172 opt: 280 Z-score: 367.3 bits: 75.7 E(85289): 1e-13
Smith-Waterman score: 280; 29.1% identity (59.7% similar) in 196 aa overlap (28-221:52-242)
10 20 30 40 50
pF1KB6 MLKPALEPRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADT
::... : ::: .. :. :::..::.
NP_002 GGRADLLDLGPGSLSDGLSLAAPGWGVPEEPGIEMLH----GTTTLAFKFRHGVIVAADS
30 40 50 60 70
60 70 80 90 100 110
pF1KB6 RATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVAT
::: . .:... .:. : : . :: ::: . :..: . ... : . .. ::.
NP_002 RATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAA
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB6 VTRILRQTLFRYQGHVGASL--IVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALA
....: . ...:.: .: :. .. : : :: :: : .:. ..:::. : .
NP_002 ASKLLANMVYQYKG-MGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYG
140 150 160 170 180 190
180 190 200 210 220 230
pF1KB6 VLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPV
:.. .. .. .: : : .:. . : ::: :. . . :
NP_002 VMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHE
200 210 220 230 240 250
240 250 260 270
pF1KB6 KRSGRYHFVPGTTAVLTQTVKPLTLELVEETVQAMEVE
NP_002 KYSGSTP
260
>>NP_001093250 (OMIM: 611137) proteasome subunit beta ty (300 aa)
initn: 264 init1: 151 opt: 277 Z-score: 362.5 bits: 75.0 E(85289): 1.9e-13
Smith-Waterman score: 277; 28.5% identity (58.8% similar) in 221 aa overlap (4-221:19-232)
10 20 30 40
pF1KB6 MLKPALEPRGGFSF-ENCQRNASLERVLPGLKVPHARKTGTTIAG
: : ::.. ..:. .. :. . : .. : ::: .
NP_001 MALQDVCKWQSPDTQGPSPHLPRAGGWAVPRGCDPQTFLQ--IHGPRLAH----GTTTLA
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 LVFQDGVILGADTRATNDSVVA-DKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKME
. :. ::: .::::.. : :: :: :. . .. .:..:: :.. ...
NP_001 FRFRHGVIAAADTRSSCGSYVACPASC-KVIPVHQHLLGTTSGTSADCATWYRVLQRELR
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 LHALSTGREPRVATVTRILRQTLFRYQG-HVGASLIVGGVDLTGPQLYGVHPHGSYSRLP
:. : :. : ::.....: . .:.: . .. . : : .::.:. :. :. .
NP_001 LRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPELFYVYSDGTRLQGD
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 FTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGA
. ..:::. : .::. .. .:. . : .: ::. . : :::.:: . ..:
NP_001 IFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSGGSVDLFHVRESGW
180 190 200 210 220 230
230 240 250 260 270
pF1KB6 KLLRTLSSPTEPVKRSGRYHFVPGTTAVLTQTVKPLTLELVEETVQAMEVE
NP_001 EHVSRSDACVLYVELQKLLEPEPEEDASHAHPEPATAHRAAEDRELSVGPGEVTPGDSRM
240 250 260 270 280 290
>>XP_005267928 (OMIM: 600306) PREDICTED: proteasome subu (169 aa)
initn: 188 init1: 172 opt: 201 Z-score: 267.7 bits: 56.6 E(85289): 3.6e-08
Smith-Waterman score: 201; 31.1% identity (64.8% similar) in 122 aa overlap (28-147:52-168)
10 20 30 40 50
pF1KB6 MLKPALEPRGGFSFENCQRNASLERVLPGLKVPHARKTGTTIAGLVFQDGVILGADT
::... : ::: .. :. :::..::.
XP_005 GGRADLLDLGPGSLSDGLSLAAPGWGVPEEPGIEMLH----GTTTLAFKFRHGVIVAADS
30 40 50 60 70
60 70 80 90 100 110
pF1KB6 RATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVAT
::: . .:... .:. : : . :: ::: . :..: . ... : . .. ::.
XP_005 RATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAA
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB6 VTRILRQTLFRYQGHVGASL--IVGGVDLTGPQLYGVHPHGSYSRLPFTALGSGQDAALA
....: . ...:.: .: :. .. : : ::
XP_005 ASKLLANMVYQYKG-MGLSMGTMICGWDKRGPG
140 150 160
180 190 200 210 220 230
pF1KB6 VLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPV
273 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:45:06 2016 done: Fri Nov 4 20:45:07 2016
Total Scan time: 7.100 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]