Result of FASTA (ccds) for
pF1KB6363
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6363, 267 aa
1>>>pF1KB6363 267 - 267 aa - 267 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2761+/-0.00089; mu= 15.4819+/- 0.053
mean_var=75.4266+/-15.444, 0's: 0 Z-trim(106.9): 49 B-trim: 556 in 1/49
Lambda= 0.147677
statistics sampled from 9190 (9239) to 9190 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.284), width: 16
Scan time: 2.310
The best scores are: opt bits E(32554)
CCDS7909.1 CD82 gene_id:3732|Hs108|chr11 ( 267) 1813 395.5 2.1e-110
CCDS31469.1 CD82 gene_id:3732|Hs108|chr11 ( 242) 1107 245.0 3.7e-65
CCDS12760.1 CD37 gene_id:951|Hs108|chr19 ( 281) 503 116.4 2.3e-26
CCDS3646.1 TSPAN5 gene_id:10098|Hs108|chr4 ( 268) 442 103.4 1.8e-22
CCDS34298.1 TSPAN17 gene_id:26262|Hs108|chr5 ( 332) 407 96.0 3.7e-20
CCDS829.1 CD53 gene_id:963|Hs108|chr1 ( 219) 403 95.0 4.8e-20
CCDS54952.1 TSPAN17 gene_id:26262|Hs108|chr5 ( 329) 401 94.7 8.9e-20
CCDS7910.1 TSPAN18 gene_id:90139|Hs108|chr11 ( 248) 398 94.0 1.1e-19
CCDS47346.2 TSPAN17 gene_id:26262|Hs108|chr5 ( 263) 398 94.0 1.2e-19
CCDS8520.1 TSPAN9 gene_id:10867|Hs108|chr12 ( 239) 392 92.7 2.6e-19
CCDS7721.1 TSPAN4 gene_id:7106|Hs108|chr11 ( 238) 391 92.5 3e-19
CCDS5810.1 TSPAN33 gene_id:340348|Hs108|chr7 ( 283) 369 87.8 9e-18
CCDS7369.1 TSPAN14 gene_id:81619|Hs108|chr10 ( 270) 355 84.8 6.8e-17
CCDS8540.1 CD9 gene_id:928|Hs108|chr12 ( 228) 351 83.9 1.1e-16
CCDS8999.1 TSPAN8 gene_id:7103|Hs108|chr12 ( 237) 346 82.9 2.3e-16
CCDS530.1 TSPAN1 gene_id:10103|Hs108|chr1 ( 241) 344 82.4 3.2e-16
CCDS7719.1 CD151 gene_id:977|Hs108|chr11 ( 253) 339 81.4 6.9e-16
CCDS44949.1 TSPAN19 gene_id:144448|Hs108|chr12 ( 248) 338 81.2 7.9e-16
CCDS31765.1 TSPAN11 gene_id:441631|Hs108|chr12 ( 253) 320 77.4 1.1e-14
CCDS7734.1 CD81 gene_id:975|Hs108|chr11 ( 236) 315 76.3 2.3e-14
CCDS46139.1 CD37 gene_id:951|Hs108|chr19 ( 213) 305 74.1 9.1e-14
CCDS77130.1 TSPAN10 gene_id:83882|Hs108|chr17 ( 393) 301 73.4 2.7e-13
CCDS10292.1 TSPAN3 gene_id:10099|Hs108|chr15 ( 253) 297 72.5 3.4e-13
CCDS881.1 TSPAN2 gene_id:10100|Hs108|chr1 ( 221) 294 71.8 4.8e-13
CCDS7294.1 TSPAN15 gene_id:23555|Hs108|chr10 ( 294) 270 66.7 2.1e-11
>>CCDS7909.1 CD82 gene_id:3732|Hs108|chr11 (267 aa)
initn: 1813 init1: 1813 opt: 1813 Z-score: 2095.6 bits: 395.5 E(32554): 2.1e-110
Smith-Waterman score: 1813; 99.6% identity (100.0% similar) in 267 aa overlap (1-267:1-267)
10 20 30 40 50 60
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYVFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYVFI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMGGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 GVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMGGI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 VTELIRDYNSSREDSLQDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPEVTYPCSCEVKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 VTELIRDYNSSREDSLQDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPEVTYPCSCEVKG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 EEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 EEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAI
190 200 210 220 230 240
250 260
pF1KB6 VELLGMVLSICLCRHVHSEDYSKVPKY
.::::::::::::::::::::::::::
CCDS79 IELLGMVLSICLCRHVHSEDYSKVPKY
250 260
>>CCDS31469.1 CD82 gene_id:3732|Hs108|chr11 (242 aa)
initn: 1105 init1: 1105 opt: 1107 Z-score: 1283.3 bits: 245.0 E(32554): 3.7e-65
Smith-Waterman score: 1597; 90.3% identity (90.6% similar) in 267 aa overlap (1-267:1-242)
10 20 30 40 50 60
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYVFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYVFI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMGGI
::::::::::::::::::::::::::: ::::::::
CCDS31 GVGAVTMLMGFLGCIGAVNEVRCLLGL-------------------------LKQEMGGI
70 80 90
130 140 150 160 170 180
pF1KB6 VTELIRDYNSSREDSLQDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPEVTYPCSCEVKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VTELIRDYNSSREDSLQDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPEVTYPCSCEVKG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 EEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAI
160 170 180 190 200 210
250 260
pF1KB6 VELLGMVLSICLCRHVHSEDYSKVPKY
.::::::::::::::::::::::::::
CCDS31 IELLGMVLSICLCRHVHSEDYSKVPKY
220 230 240
>>CCDS12760.1 CD37 gene_id:951|Hs108|chr19 (281 aa)
initn: 639 init1: 341 opt: 503 Z-score: 586.9 bits: 116.4 E(32554): 2.3e-26
Smith-Waterman score: 629; 37.0% identity (69.2% similar) in 276 aa overlap (4-267:6-280)
10 20 30 40 50
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYV
.:... :::::.:::.::.::..:. ::.::: ::.::.: . . :.. . :
CCDS12 MSAQESCLSLIKYFLFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 FIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMG
. : :: ...:::.::..:.::::::::..:::.. .:.: : :. . ..:.. .
CCDS12 LAISGIFTMGIALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRAQLERSLR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 GIVTELIRDYNSSREDSL-QDAWDYVQAQVKCCGWVSFYNWTDNAELM-NRPEV-TYPCS
.: . :. :... :.. ...::::: :..:::: .: . : : :. :::
CCDS12 DVVEKTIQKYGTNPEETAAEESWDYVQFQLRCCGWHYPQDWFQVLILRGNGSEAHRVPCS
130 140 150 160 170 180
180 190 200 210 220
pF1KB6 C-EVKGEEDNSL--SV------RKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQE
: .... .:... .: : : . .. : . .:.::: . .: ::..
CCDS12 CYNLSATNDSTILDKVILPQLSRLGHLARSRHSADICAVPAESHIYREGCAQGLQKWLHN
190 200 210 220 230 240
230 240 250 260
pF1KB6 NLGIILGVGVGVAIVELLGMVLSICLCRHVHSEDYSKVPKY
:: :.:. .::...:: :.::: :::.. .. :... .:
CCDS12 NLISIVGICLGVGLLELGFMTLSIFLCRNL-DHVYNRLARYR
250 260 270 280
>>CCDS3646.1 TSPAN5 gene_id:10098|Hs108|chr4 (268 aa)
initn: 420 init1: 243 opt: 442 Z-score: 517.0 bits: 103.4 E(32554): 1.8e-22
Smith-Waterman score: 442; 31.0% identity (62.3% similar) in 268 aa overlap (3-259:12-260)
10 20 30 40 50
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSS
: :: :::.: ::.::..:: ..::.:.: .:. ::.. ::
CCDS36 MSGKHYKGPEVSCCI---KYFIFGFNVIFWFLGITFLGIGLWAWNEKG----VLSNISSI
10 20 30 40 50
60 70 80 90 100
pF1KB6 LRMGAY----VFIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFY
.:.. .:. ::.: ...:: :::::. : :: .. .:: .:.. ..:::.: .
CCDS36 TDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAF
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 FNMGKLKQEMGGIVTELIRDYNSSRED-SLQDAWDYVQAQVKCCGWVSFYNWTDNAEL--
.:... .... :: : :.: .::. :..: .::: . .:. : .
CCDS36 VFKDWIKDQLYFFINNNIRAY---RDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNC
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 ----MNRPEVTYPCSCEVKGEEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKV
.: . : :: .: .. .... :. . :. . .. .: .::. .
CCDS36 TDSNASRERCGVPFSCCTKDPAEDVINTQCGY-----DARQKPEVDQQIVIYTKGCVPQF
180 190 200 210 220
230 240 250 260
pF1KB6 QAWLQENLGIILGVGVGVAIVELLGMVLSICLCRHVHSEDYSKVPKY
. :::.:: :. :. .:.:.....: ::: ... :.
CCDS36 EKWLQDNLTIVAGIFIGIALLQIFG----ICLAQNLVSDIEAVRASW
230 240 250 260
>>CCDS34298.1 TSPAN17 gene_id:26262|Hs108|chr5 (332 aa)
initn: 400 init1: 235 opt: 407 Z-score: 475.4 bits: 96.0 E(32554): 3.7e-20
Smith-Waterman score: 407; 28.0% identity (63.4% similar) in 257 aa overlap (10-259:18-265)
10 20 30 40 50
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSL
::::: ::..:..:::..:..:.: ..:. . .. .. .
CCDS34 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 RMGAYVFIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGK
...:. ::.: ..:: :::::. : :: .. .:: ::.. ....: : .
CCDS34 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
70 80 90 100 110 120
120 130 140 150 160
pF1KB6 LKQEMGGIVTELIRDYNSSRED-SLQDAWDYVQAQVKCCGWVSFYNWTDNAEL----MN-
...... .... .. : :.: .::. :..: .::: . .:. : . .:
CCDS34 IRDQLNLFINNNVKAY---RDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNP
130 140 150 160 170
170 180 190 200 210 220
pF1KB6 -RPEVTYPCSCEVKGEEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQ
: . : :: :. .. :... :. . :. .. .. .::. . . :::
CCDS34 SRERCGVPFSCCVRDPAEDVLNTQCGY--DVRLKLVRGELEQQGFIHTKGCVGQFEKWLQ
180 190 200 210 220 230
230 240 250 260
pF1KB6 ENLGIILGVGVGVAIVELLGMVLSICLCRHVHSEDYSKVPKY
.:: .. :: .:.:.....: ::: ... :.
CCDS34 DNLIVVAGVFMGIALLQIFG----ICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISE
240 250 260 270 280 290
CCDS34 VLSTAGPQQNSLTGAPGPAPPSRHVFFGLGGLYPEPTFKNW
300 310 320 330
>>CCDS829.1 CD53 gene_id:963|Hs108|chr1 (219 aa)
initn: 466 init1: 177 opt: 403 Z-score: 473.3 bits: 95.0 E(32554): 4.8e-20
Smith-Waterman score: 427; 32.9% identity (59.6% similar) in 255 aa overlap (1-254:1-209)
10 20 30 40 50 60
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYVFI
:: . .:. :: ::.:::.:.: : :::::...: .. ..:: . :: .: ::.
CCDS82 MGMSSLKLLKYVLFFFNLLFWICGCCILGFGIYLLIHNN--FGVLFHNLPSLTLGN-VFV
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMGGI
::.. :...::::.:...: .::: .: .::.::.:.:: . :.. ::.. ..
CCDS82 IVGSIIMVVAFLGCMGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 VTELIRDYNSSREDSLQDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPEVTYPCSCEVKG
.:. :. :.: ..: . ::: .:. ..::: . .::.. : : ::
CCDS82 LTDSIHRYHS--DNSTKAAWDSIQSFLQCCGINGTSDWTSG------P----PASC----
120 130 140 150 160
190 200 210 220 230 240
pF1KB6 EEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAI
: : : :::. :.. :.. :. : . . : .
CCDS82 -------------------------PSDRKV--EGCYAKARLWFHSNFLYIGIITICVCV
170 180 190
250 260
pF1KB6 VELLGMVLSICL-CRHVHSEDYSKVPKY
.:.::: ... : :.
CCDS82 IEVLGMSFALTLNCQIDKTSQTIGL
200 210
>>CCDS54952.1 TSPAN17 gene_id:26262|Hs108|chr5 (329 aa)
initn: 392 init1: 227 opt: 401 Z-score: 468.5 bits: 94.7 E(32554): 8.9e-20
Smith-Waterman score: 401; 28.0% identity (63.4% similar) in 257 aa overlap (10-259:18-262)
10 20 30 40 50
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSL
::::: ::..:..:::..:..:.: ..:. . .. .. .
CCDS54 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 RMGAYVFIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGK
...:. ::.: ..:: :::::. : :: .. .:: ::.. ....: : .
CCDS54 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
70 80 90 100 110 120
120 130 140 150 160
pF1KB6 LKQEMGGIVTELIRDYNSSRED-SLQDAWDYVQAQVKCCGWVSFYNWTDNAEL----MN-
...... .... .. : :.: .::. :..: .::: . .:. : . .:
CCDS54 IRDQLNLFINNNVKAY---RDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNP
130 140 150 160 170
170 180 190 200 210 220
pF1KB6 -RPEVTYPCSCEVKGEEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQ
: . : :: :. .. :... :. : . . . . .. .::. . . :::
CCDS54 SRERCGVPFSCCVRDPAEDVLNTQCGY----DVRLKLELEQQGF-IHTKGCVGQFEKWLQ
180 190 200 210 220 230
230 240 250 260
pF1KB6 ENLGIILGVGVGVAIVELLGMVLSICLCRHVHSEDYSKVPKY
.:: .. :: .:.:.....: ::: ... :.
CCDS54 DNLIVVAGVFMGIALLQIFG----ICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISE
240 250 260 270 280
CCDS54 VLSTAGPQQNSLTGAPGPAPPSRHVFFGLGGLYPEPTFKNW
290 300 310 320
>>CCDS7910.1 TSPAN18 gene_id:90139|Hs108|chr11 (248 aa)
initn: 416 init1: 183 opt: 398 Z-score: 466.8 bits: 94.0 E(32554): 1.1e-19
Smith-Waterman score: 398; 26.3% identity (64.9% similar) in 262 aa overlap (1-257:1-248)
10 20 30 40 50 60
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYVFI
: . :.. ::..:.::...:. :: .:..:.:...: ..: .. ... : :::...
CCDS79 MEGDCLSCMKYLMFVFNFFIFLGGACLLAIGIWVMVDPTGFREIV-AANPLLLTGAYILL
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMGGI
..:.. .:.::::: ::: : .::: ..: :.:.:..:...:. : .. .: .:. .
CCDS79 AMGGLLFLLGFLGCCGAVRENKCLLLFFFLFILIIFLAELSAAILAFIFRENLTREF--F
60 70 80 90 100 110
130 140 150 160 170
pF1KB6 VTELIRDYNSSRE-DSLQDAWDYVQAQVKCCGWVSF--YNWTDNAELM--NRPEVTYPCS
. :: . :... . : .. .:. :. ::: . ..... .:. . :: :
CCDS79 TKELTKHYQGNNDTDVFSATWNSVMITFGCCGVNGPEDFKFASVFRLLTLDSEEVPEAC-
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 CEVKGEEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVG
:. . . ... . . : .:. : ..::. . .. . . ...
CCDS79 CRREPQSRDGVLLSREECLL--GRSLFLN--------KQGCYTVILNTFETYVYLAGALA
180 190 200 210 220
240 250 260
pF1KB6 VGVAIVELLGMVLSICLCRHVHSEDYSKVPKY
.:: .::..:....:: : ..
CCDS79 IGVLAIELFAMIFAMCLFRGIQ
230 240
>>CCDS47346.2 TSPAN17 gene_id:26262|Hs108|chr5 (263 aa)
initn: 389 init1: 227 opt: 398 Z-score: 466.4 bits: 94.0 E(32554): 1.2e-19
Smith-Waterman score: 398; 29.4% identity (63.5% similar) in 252 aa overlap (10-249:18-256)
10 20 30 40 50
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSL
::::: ::..:..:::..:..:.: ..:. ::.. :.
CCDS47 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKG----VLSNISALT
10 20 30 40 50
60 70 80 90 100
pF1KB6 RMGA----YVFIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYF
.:. ..:. ::.: ..:: :::::. : :: .. .:: ::.. ....: : .
CCDS47 DLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFV
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 NMGKLKQEMGGIVTELIRDYNSSRED-SLQDAWDYVQAQVKCCGWVSFYNWTDNAEL---
...... .... .. : :.: .::. :..: .::: . .:. : .
CCDS47 FKDWIRDQLNLFINNNVKAY---RDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCT
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 -MN--RPEVTYPCSCEVKGEEDNSLSVRKGF-CEAPGNRTQSGNHPEDWPVYQEGCMEKV
.: : . : :: :. .. :... :. . . :.: .. .::. .
CCDS47 DLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGF------IHTKGCVGQF
180 190 200 210 220
230 240 250 260
pF1KB6 QAWLQENLGIILGVGVGVAIVELLGMVLSICLCRHVHSEDYSKVPKY
. :::.:: .. :: .:.:.....:. :.
CCDS47 EKWLQDNLIVVAGVFMGIALLQIFGICLAQNLEQME
230 240 250 260
>>CCDS8520.1 TSPAN9 gene_id:10867|Hs108|chr12 (239 aa)
initn: 485 init1: 240 opt: 392 Z-score: 460.1 bits: 92.7 E(32554): 2.6e-19
Smith-Waterman score: 497; 32.3% identity (65.4% similar) in 257 aa overlap (1-257:1-231)
10 20 30 40 50 60
pF1KB6 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSLRMGAYVFI
:. .:. ::..:::::::.. : .:: :.:. .....: .... : :: .: . :
CCDS85 MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNF-ATFSPSFPSLS-AANLVI
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 GVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGKLKQEMGGI
..:...:. :::::.::..: .::: .: ::.::.:.. ::. : :....
CCDS85 AIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNENAKKD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 VTELIRDYNSSREDSLQDAWDYVQAQVKCCGWVSFYNWTDNAELMNRPEVTYPCSCEVKG
. : . :.. . .:..::. .::...::: ... .: :: : :
CCDS85 LKEGLLLYHTENNVGLKNAWNIIQAEMRCCGVTDYTDW-------------YP----VLG
120 130 140 150 160
190 200 210 220 230 240
pF1KB6 EEDNSLSVRKGFCEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWLQENLGIILGVGVGVAI
: :.. : : . .:. .. :... ::.:::. :...: .. ::. . :
CCDS85 E--NTVPDR---CCMEN--SQGCGRNATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILI
170 180 190 200 210
250 260
pF1KB6 VELLGMVLSICLCRHVHSEDYSKVPKY
...:::..:. : .:.:
CCDS85 MQILGMAFSMTLFQHIHRTGKKYDA
220 230
267 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:39:19 2016 done: Fri Nov 4 20:39:19 2016
Total Scan time: 2.310 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]