Result of FASTA (ccds) for
pF1KB6359
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6359, 254 aa
1>>>pF1KB6359 254 - 254 aa - 254 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8720+/-0.000974; mu= 11.4818+/- 0.059
mean_var=64.4051+/-12.694, 0's: 0 Z-trim(103.8): 33 B-trim: 0 in 0/50
Lambda= 0.159814
statistics sampled from 7596 (7607) to 7596 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.603), E-opt: 0.2 (0.234), width: 16
Scan time: 2.240
The best scores are: opt bits E(32554)
CCDS45689.1 PSME3 gene_id:10197|Hs108|chr17 ( 254) 1620 382.3 1.8e-106
CCDS59290.1 PSME3 gene_id:10197|Hs108|chr17 ( 265) 1545 365.0 2.9e-101
CCDS82133.1 PSME3 gene_id:10197|Hs108|chr17 ( 193) 1239 294.4 3.8e-80
CCDS11442.1 PSME3 gene_id:10197|Hs108|chr17 ( 267) 879 211.4 5e-55
CCDS9612.1 PSME1 gene_id:5720|Hs108|chr14 ( 249) 679 165.3 3.5e-41
CCDS61415.1 PSME1 gene_id:5720|Hs108|chr14 ( 233) 600 147.1 1e-35
CCDS41930.1 PSME1 gene_id:5720|Hs108|chr14 ( 250) 600 147.1 1.1e-35
CCDS9614.1 PSME2 gene_id:5721|Hs108|chr14 ( 239) 426 107.0 1.2e-23
>>CCDS45689.1 PSME3 gene_id:10197|Hs108|chr17 (254 aa)
initn: 1620 init1: 1620 opt: 1620 Z-score: 2025.1 bits: 382.3 E(32554): 1.8e-106
Smith-Waterman score: 1620; 100.0% identity (100.0% similar) in 254 aa overlap (1-254:1-254)
10 20 30 40 50 60
pF1KB6 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 KVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQIS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 RYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIE
190 200 210 220 230 240
250
pF1KB6 KIKRPRSSNAETLY
::::::::::::::
CCDS45 KIKRPRSSNAETLY
250
>>CCDS59290.1 PSME3 gene_id:10197|Hs108|chr17 (265 aa)
initn: 1545 init1: 1545 opt: 1545 Z-score: 1931.4 bits: 365.0 E(32554): 2.9e-101
Smith-Waterman score: 1545; 100.0% identity (100.0% similar) in 241 aa overlap (14-254:25-265)
10 20 30 40
pF1KB6 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPI
::::::::::::::::::::::::::::::::::::
CCDS59 MEKWILKKIKYLQSGGLSASYYSYKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPI
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 LNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGML
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 KSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 KSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 SEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYV
190 200 210 220 230 240
230 240 250
pF1KB6 TLHDMILKNIEKIKRPRSSNAETLY
:::::::::::::::::::::::::
CCDS59 TLHDMILKNIEKIKRPRSSNAETLY
250 260
>>CCDS82133.1 PSME3 gene_id:10197|Hs108|chr17 (193 aa)
initn: 1239 init1: 1239 opt: 1239 Z-score: 1552.4 bits: 294.4 E(32554): 3.8e-80
Smith-Waterman score: 1239; 100.0% identity (100.0% similar) in 193 aa overlap (62-254:1-193)
40 50 60 70 80 90
pF1KB6 NFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDE
::::::::::::::::::::::::::::::
CCDS82 MNLPVPDPILLTNSHDGLDGPTYKKRRLDE
10 20 30
100 110 120 130 140 150
pF1KB6 CEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 CEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGN
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB6 NFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 NFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDE
100 110 120 130 140 150
220 230 240 250
pF1KB6 KEYISLRLIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY
:::::::::::::::::::::::::::::::::::::::::::
CCDS82 KEYISLRLIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY
160 170 180 190
>>CCDS11442.1 PSME3 gene_id:10197|Hs108|chr17 (267 aa)
initn: 1606 init1: 879 opt: 879 Z-score: 1101.4 bits: 211.4 E(32554): 5e-55
Smith-Waterman score: 1584; 95.1% identity (95.1% similar) in 267 aa overlap (1-254:1-267)
10 20 30 40 50 60
pF1KB6 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIE
70 80 90 100 110 120
130 140 150 160
pF1KB6 KVKPEIRLLIEKCNT-------------VKMWVQLLIPRIEDGNNFGVSIQEETVAELRT
::::::::::::::: ::::::::::::::::::::::::::::::::
CCDS11 KVKPEIRLLIEKCNTPSGKGPHICFDLQVKMWVQLLIPRIEDGNNFGVSIQEETVAELRT
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 VESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQ
190 200 210 220 230 240
230 240 250
pF1KB6 YVTLHDMILKNIEKIKRPRSSNAETLY
:::::::::::::::::::::::::::
CCDS11 YVTLHDMILKNIEKIKRPRSSNAETLY
250 260
>>CCDS9612.1 PSME1 gene_id:5720|Hs108|chr14 (249 aa)
initn: 672 init1: 473 opt: 679 Z-score: 852.7 bits: 165.3 E(32554): 3.5e-41
Smith-Waterman score: 679; 40.9% identity (74.2% similar) in 252 aa overlap (3-254:2-249)
10 20 30 40 50 60
pF1KB6 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHS
..:.:. :.. ::: ::: . ...:.:....::::. :::.::::: :: .:.....
CCDS96 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 DMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIE
...:::::. .... .:. :: ... . : : : .. :...: ...
CCDS96 PLDIPVPDPVKEKEKEE--RKKQQEKEDKDEKKKGEDEDK--GPPCGPVNCNEKIVVLLQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 KVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQIS
..::::. .::. : : :.:: ::::::::::::..::.. . ..... .. :::
CCDS96 RLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQIS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 RYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIE
.:. :. :.: :: ::: :::. : :.:: :: ..::.. :.:: :..:.:.::::.:
CCDS96 KYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFE
180 190 200 210 220 230
250
pF1KB6 KIKRPRSSNAETLY
:.:.::. . .:
CCDS96 KLKKPRGETKGMIY
240
>>CCDS61415.1 PSME1 gene_id:5720|Hs108|chr14 (233 aa)
initn: 597 init1: 398 opt: 600 Z-score: 754.8 bits: 147.1 E(32554): 1e-35
Smith-Waterman score: 600; 40.5% identity (73.1% similar) in 227 aa overlap (3-229:2-224)
10 20 30 40 50 60
pF1KB6 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHS
..:.:. :.. ::: ::: . ...:.:....::::. :::.::::: :: .:.....
CCDS61 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 DMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIE
...:::::. .... .:. :: ... . : : : .. :...: ...
CCDS61 PLDIPVPDPVKEKEKEE--RKKQQEKEDKDEKKKGEDEDKG--PPCGPVNCNEKIVVLLQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 KVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQIS
..::::. .::. : : :.:: ::::::::::::..::.. . ..... .. :::
CCDS61 RLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQIS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 RYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIE
.:. :. :.: :: ::: :::. : :.:: :: ..::.. :.:: ::
CCDS61 KYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYVRRLCYMTSS
180 190 200 210 220 230
250
pF1KB6 KIKRPRSSNAETLY
>>CCDS41930.1 PSME1 gene_id:5720|Hs108|chr14 (250 aa)
initn: 597 init1: 398 opt: 600 Z-score: 754.3 bits: 147.1 E(32554): 1.1e-35
Smith-Waterman score: 600; 40.5% identity (73.1% similar) in 227 aa overlap (3-229:2-224)
10 20 30 40 50 60
pF1KB6 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHS
..:.:. :.. ::: ::: . ...:.:....::::. :::.::::: :: .:.....
CCDS41 MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKA
10 20 30 40 50
70 80 90 100 110 120
pF1KB6 DMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIE
...:::::. .... .:. :: ... . : : : .. :...: ...
CCDS41 PLDIPVPDPVKEKEKEE--RKKQQEKEDKDEKKKGEDEDKG--PPCGPVNCNEKIVVLLQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB6 KVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQIS
..::::. .::. : : :.:: ::::::::::::..::.. . ..... .. :::
CCDS41 RLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQIS
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB6 RYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNIE
.:. :. :.: :: ::: :::. : :.:: :: ..::.. :.:: ::
CCDS41 KYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYVRRQGQGRGGQR
180 190 200 210 220 230
250
pF1KB6 KIKRPRSSNAETLY
CCDS41 QLSQATHSLTLQARG
240 250
>>CCDS9614.1 PSME2 gene_id:5721|Hs108|chr14 (239 aa)
initn: 582 init1: 399 opt: 426 Z-score: 537.8 bits: 107.0 E(32554): 1.2e-23
Smith-Waterman score: 535; 33.6% identity (66.8% similar) in 250 aa overlap (5-254:7-239)
10 20 30 40 50
pF1KB6 MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQI
.... :.. .:. ::. . .:::... :.:.:.. :...:.: ::. :::..
CCDS96 MAKPCGVRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 HSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDI
.. ...:.::: . : .. .:... .: :.: .:......
CCDS96 RAPLDIPIPDP---PPKDDEMETDKQEKKEVHKC--------------GFLPGNEKVLSL
70 80 90 100
120 130 140 150 160 170
pF1KB6 IEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQ
. ::::. : ::: : :.: :::.:::::.:::.:::... .. .:.... ..
CCDS96 LALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTT
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB6 ISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKN
::.:. :. :.: .: :: ::: : : :: : :: .. .:: :. :. .: .:
CCDS96 ISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAELYHIISSN
170 180 190 200 210 220
240 250
pF1KB6 IEKIKRPRSSNAETLY
.::: :.. . ..:
CCDS96 LEKIVNPKGEEKPSMY
230
254 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:35:07 2016 done: Fri Nov 4 18:35:08 2016
Total Scan time: 2.240 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]