Result of FASTA (omim) for
pF1KB6356
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6356, 295 aa
1>>>pF1KB6356 295 - 295 aa - 295 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.4862+/-0.000364; mu= -6.7241+/- 0.023
mean_var=353.5136+/-73.076, 0's: 0 Z-trim(124.8): 45 B-trim: 841 in 1/58
Lambda= 0.068214
statistics sampled from 47135 (47183) to 47135 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.839), E-opt: 0.2 (0.553), width: 16
Scan time: 8.750
The best scores are: opt bits E(85289)
NP_065093 (OMIM: 607611) phospholipid scramblase 3 ( 295) 2118 221.3 1.8e-57
NP_001188505 (OMIM: 607611) phospholipid scramblas ( 295) 2118 221.3 1.8e-57
XP_011511207 (OMIM: 604170) PREDICTED: phospholipi ( 311) 1038 115.1 1.8e-25
XP_016862118 (OMIM: 604170) PREDICTED: phospholipi ( 318) 1038 115.1 1.8e-25
XP_011511206 (OMIM: 604170) PREDICTED: phospholipi ( 318) 1038 115.1 1.8e-25
NP_066928 (OMIM: 604170) phospholipid scramblase 1 ( 318) 1038 115.1 1.8e-25
XP_016862117 (OMIM: 604170) PREDICTED: phospholipi ( 319) 996 110.9 3.2e-24
NP_001186908 (OMIM: 607610) phospholipid scramblas ( 293) 913 102.7 8.7e-22
XP_016862394 (OMIM: 607610) PREDICTED: phospholipi ( 297) 913 102.7 8.8e-22
NP_001186907 (OMIM: 607610) phospholipid scramblas ( 297) 913 102.7 8.8e-22
XP_016862398 (OMIM: 607610) PREDICTED: phospholipi ( 297) 913 102.7 8.8e-22
XP_016862395 (OMIM: 607610) PREDICTED: phospholipi ( 297) 913 102.7 8.8e-22
XP_016862397 (OMIM: 607610) PREDICTED: phospholipi ( 297) 913 102.7 8.8e-22
XP_016862396 (OMIM: 607610) PREDICTED: phospholipi ( 297) 913 102.7 8.8e-22
XP_011511315 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_016862392 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_016862391 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_016862388 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_016862393 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_016862387 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_011511323 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_011511321 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_011511322 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_011511324 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_016862389 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_016862390 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_011511325 (OMIM: 607610) PREDICTED: phospholipi ( 325) 913 102.8 9.4e-22
XP_016862399 (OMIM: 607610) PREDICTED: phospholipi ( 224) 894 100.8 2.6e-21
XP_016862400 (OMIM: 607610) PREDICTED: phospholipi ( 224) 894 100.8 2.6e-21
XP_016862404 (OMIM: 607610) PREDICTED: phospholipi ( 224) 894 100.8 2.6e-21
NP_065092 (OMIM: 607610) phospholipid scramblase 2 ( 224) 894 100.8 2.6e-21
XP_016862403 (OMIM: 607610) PREDICTED: phospholipi ( 224) 894 100.8 2.6e-21
XP_005247595 (OMIM: 604170) PREDICTED: phospholipi ( 237) 894 100.8 2.7e-21
XP_011511208 (OMIM: 604170) PREDICTED: phospholipi ( 237) 894 100.8 2.7e-21
XP_011511209 (OMIM: 604170) PREDICTED: phospholipi ( 237) 894 100.8 2.7e-21
XP_016862401 (OMIM: 607610) PREDICTED: phospholipi ( 222) 845 95.9 7.4e-20
XP_005247712 (OMIM: 607612) PREDICTED: phospholipi ( 329) 724 84.2 3.8e-16
XP_005247711 (OMIM: 607612) PREDICTED: phospholipi ( 329) 724 84.2 3.8e-16
NP_065086 (OMIM: 607612) phospholipid scramblase 4 ( 329) 724 84.2 3.8e-16
XP_011511333 (OMIM: 607612) PREDICTED: phospholipi ( 329) 724 84.2 3.8e-16
NP_001121777 (OMIM: 607612) phospholipid scramblas ( 329) 724 84.2 3.8e-16
NP_001121776 (OMIM: 607612) phospholipid scramblas ( 329) 724 84.2 3.8e-16
NP_001170775 (OMIM: 607612) phospholipid scramblas ( 224) 437 55.8 9.1e-08
NP_001121778 (OMIM: 607612) phospholipid scramblas ( 239) 437 55.8 9.5e-08
XP_016862410 (OMIM: 607612) PREDICTED: phospholipi ( 239) 437 55.8 9.5e-08
>>NP_065093 (OMIM: 607611) phospholipid scramblase 3 [Ho (295 aa)
initn: 2118 init1: 2118 opt: 2118 Z-score: 1153.0 bits: 221.3 E(85289): 1.8e-57
Smith-Waterman score: 2118; 100.0% identity (100.0% similar) in 295 aa overlap (1-295:1-295)
10 20 30 40 50 60
pF1KB6 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAVTS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAVTS
250 260 270 280 290
>>NP_001188505 (OMIM: 607611) phospholipid scramblase 3 (295 aa)
initn: 2118 init1: 2118 opt: 2118 Z-score: 1153.0 bits: 221.3 E(85289): 1.8e-57
Smith-Waterman score: 2118; 100.0% identity (100.0% similar) in 295 aa overlap (1-295:1-295)
10 20 30 40 50 60
pF1KB6 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAVTS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAVTS
250 260 270 280 290
>>XP_011511207 (OMIM: 604170) PREDICTED: phospholipid sc (311 aa)
initn: 1090 init1: 956 opt: 1038 Z-score: 578.3 bits: 115.1 E(85289): 1.8e-25
Smith-Waterman score: 1038; 51.5% identity (73.6% similar) in 299 aa overlap (3-286:13-302)
10 20 30 40
pF1KB6 MAGYLPPKGYAPSP---PPPYPVTPG----YPEP-ALHPGPGQA--PVPA
:: ::. : :. :: : :: :: : : : ::: : :::
XP_011 MNASHPETNLPVGY-PPQ-YPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGPAGFPVPN
10 20 30 40 50
50 60 70 80 90
pF1KB6 QVPAPAPGFALFPSPGPVALGSAA-PFLPLP----GVPSGLEFLVQIDQILIHQKAERVE
: :. . .. .: .:.:. :..: : . : :::.: :::::::::. : .:
XP_011 Q---PVYNQPVYNQP----VGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIHQQIELLE
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB6 TFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVLRLLRP
.. :.:: :.::.... :: . :::...::.: ::: ::. .:. : .::. : ::
XP_011 VLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERP
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB6 LHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCG
:.:. :::: :::.:.:::::. ::.:.::::: ::::.::. :. ::.. ::: .:.
XP_011 LRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVVCS
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB6 CGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATF
: :..::.:. ::. ::.:::.: :..:::.::::.::.::::::::..:::..:: :
XP_011 CCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACF
240 250 260 270 280 290
280 290
pF1KB6 LIDYMFFEKRGGAGPSAVTS
:::.::::. :
XP_011 LIDFMFFESTGSQEQKSGVW
300 310
>>XP_016862118 (OMIM: 604170) PREDICTED: phospholipid sc (318 aa)
initn: 1090 init1: 956 opt: 1038 Z-score: 578.1 bits: 115.1 E(85289): 1.8e-25
Smith-Waterman score: 1038; 51.5% identity (73.6% similar) in 299 aa overlap (3-286:20-309)
10 20 30
pF1KB6 MAGYLPPKGYAPSP---PPPYPVTPG----YPEP-ALHPGPGQ
:: ::. : :. :: : :: :: : : : :::
XP_016 MDKQNSQMNASHPETNLPVGY-PPQ-YPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGP
10 20 30 40 50
40 50 60 70 80
pF1KB6 A--PVPAQVPAPAPGFALFPSPGPVALGSAA-PFLPLP----GVPSGLEFLVQIDQILIH
: ::: : :. . .. .: .:.:. :..: : . : :::.: ::::::::
XP_016 AGFPVPNQ---PVYNQPVYNQP----VGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIH
60 70 80 90 100 110
90 100 110 120 130 140
pF1KB6 QKAERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDRE
:. : .:.. :.:: :.::.... :: . :::...::.: ::: ::. .:. : .:
XP_016 QQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQE
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB6 VLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVV
:. : :::.:. :::: :::.:.:::::. ::.:.::::: ::::.::. :. ::..
XP_016 VITLERPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKIS
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB6 GPCWTCGCGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKA
::: .:.: :..::.:. ::. ::.:::.: :..:::.::::.::.::::::::..::
XP_016 GPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKA
240 250 260 270 280 290
270 280 290
pF1KB6 VLLGATFLIDYMFFEKRGGAGPSAVTS
:..:: ::::.::::. :
XP_016 VMIGACFLIDFMFFESTGSQEQKSGVW
300 310
>>XP_011511206 (OMIM: 604170) PREDICTED: phospholipid sc (318 aa)
initn: 1090 init1: 956 opt: 1038 Z-score: 578.1 bits: 115.1 E(85289): 1.8e-25
Smith-Waterman score: 1038; 51.5% identity (73.6% similar) in 299 aa overlap (3-286:20-309)
10 20 30
pF1KB6 MAGYLPPKGYAPSP---PPPYPVTPG----YPEP-ALHPGPGQ
:: ::. : :. :: : :: :: : : : :::
XP_011 MDKQNSQMNASHPETNLPVGY-PPQ-YPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGP
10 20 30 40 50
40 50 60 70 80
pF1KB6 A--PVPAQVPAPAPGFALFPSPGPVALGSAA-PFLPLP----GVPSGLEFLVQIDQILIH
: ::: : :. . .. .: .:.:. :..: : . : :::.: ::::::::
XP_011 AGFPVPNQ---PVYNQPVYNQP----VGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIH
60 70 80 90 100 110
90 100 110 120 130 140
pF1KB6 QKAERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDRE
:. : .:.. :.:: :.::.... :: . :::...::.: ::: ::. .:. : .:
XP_011 QQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQE
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB6 VLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVV
:. : :::.:. :::: :::.:.:::::. ::.:.::::: ::::.::. :. ::..
XP_011 VITLERPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKIS
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB6 GPCWTCGCGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKA
::: .:.: :..::.:. ::. ::.:::.: :..:::.::::.::.::::::::..::
XP_011 GPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKA
240 250 260 270 280 290
270 280 290
pF1KB6 VLLGATFLIDYMFFEKRGGAGPSAVTS
:..:: ::::.::::. :
XP_011 VMIGACFLIDFMFFESTGSQEQKSGVW
300 310
>>NP_066928 (OMIM: 604170) phospholipid scramblase 1 [Ho (318 aa)
initn: 1090 init1: 956 opt: 1038 Z-score: 578.1 bits: 115.1 E(85289): 1.8e-25
Smith-Waterman score: 1038; 51.5% identity (73.6% similar) in 299 aa overlap (3-286:20-309)
10 20 30
pF1KB6 MAGYLPPKGYAPSP---PPPYPVTPG----YPEP-ALHPGPGQ
:: ::. : :. :: : :: :: : : : :::
NP_066 MDKQNSQMNASHPETNLPVGY-PPQ-YPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGP
10 20 30 40 50
40 50 60 70 80
pF1KB6 A--PVPAQVPAPAPGFALFPSPGPVALGSAA-PFLPLP----GVPSGLEFLVQIDQILIH
: ::: : :. . .. .: .:.:. :..: : . : :::.: ::::::::
NP_066 AGFPVPNQ---PVYNQPVYNQP----VGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIH
60 70 80 90 100 110
90 100 110 120 130 140
pF1KB6 QKAERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDRE
:. : .:.. :.:: :.::.... :: . :::...::.: ::: ::. .:. : .:
NP_066 QQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQE
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB6 VLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVV
:. : :::.:. :::: :::.:.:::::. ::.:.::::: ::::.::. :. ::..
NP_066 VITLERPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKIS
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB6 GPCWTCGCGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKA
::: .:.: :..::.:. ::. ::.:::.: :..:::.::::.::.::::::::..::
NP_066 GPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKA
240 250 260 270 280 290
270 280 290
pF1KB6 VLLGATFLIDYMFFEKRGGAGPSAVTS
:..:: ::::.::::. :
NP_066 VMIGACFLIDFMFFESTGSQEQKSGVW
300 310
>>XP_016862117 (OMIM: 604170) PREDICTED: phospholipid sc (319 aa)
initn: 945 init1: 917 opt: 996 Z-score: 555.8 bits: 110.9 E(85289): 3.2e-24
Smith-Waterman score: 996; 50.5% identity (72.9% similar) in 295 aa overlap (3-282:20-305)
10 20 30
pF1KB6 MAGYLPPKGYAPSP---PPPYPVTPG----YPEP-ALHPGPGQ
:: ::. : :. :: : :: :: : : : :::
XP_016 MDKQNSQMNASHPETNLPVGY-PPQ-YPPTAFQGPPGYSGYPGPQVSYPPPPAGHSGPGP
10 20 30 40 50
40 50 60 70 80
pF1KB6 A--PVPAQVPAPAPGFALFPSPGPVALGSAA-PFLPLP----GVPSGLEFLVQIDQILIH
: ::: : :. . .. .: .:.:. :..: : . : :::.: ::::::::
XP_016 AGFPVPNQ---PVYNQPVYNQP----VGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIH
60 70 80 90 100 110
90 100 110 120 130 140
pF1KB6 QKAERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDRE
:. : .:.. :.:: :.::.... :: . :::...::.: ::: ::. .:. : .:
XP_016 QQIELLEVLTGFETNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQE
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB6 VLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVV
:. : :::.:. :::: :::.:.:::::. ::.:.::::: ::::.::. :. ::..
XP_016 VITLERPLRCSSCCCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKIS
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB6 GPCWTCGCGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKA
::: .:.: :..::.:. ::. ::.:::.: :..:::.::::.::.::::::::..::
XP_016 GPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKA
240 250 260 270 280 290
270 280 290
pF1KB6 VLLGATFLIDYMFFEKRGGAGPSAVTS
:..:: ::: .:.
XP_016 VMIGACFLIVSLFLLILIIDAFSRFILK
300 310
>>NP_001186908 (OMIM: 607610) phospholipid scramblase 2 (293 aa)
initn: 963 init1: 876 opt: 913 Z-score: 512.1 bits: 102.7 E(85289): 8.7e-22
Smith-Waterman score: 932; 50.0% identity (73.5% similar) in 264 aa overlap (22-284:39-291)
10 20 30 40 50
pF1KB6 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQV-PAPAPGFA
:: . : : : : .:.: :. :
NP_001 PGPPGHIVYPKHQAGHTGKQADHLGSQAFYPGRQHDYLVPPAGTAGIPVQNQPGRPEGVP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 LFPSPGPVALGSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRS
.:.: : :: . : :::.: :::.:::::. : .:.....:. : ::...
NP_001 WMPAPPP----------PL-NCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKN
70 80 90 100 110
120 130 140 150 160 170
pF1KB6 GAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEM
. :: . :::..: : : ::: ::. .:..: :::. : :::.:.: :::: :::.
NP_001 SFGQRIYFAAEDTNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB6 EVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDES
:.:::::. .:.: ::::: : ::.:.. :. ::.. ::: .:.: . ..::. . ::.
NP_001 EIQAPPGVPVGYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 RSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGP
::::::.:.:..:::.::::.::.::: ::::..:::..:: :::::::::.
NP_001 IVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERTR
240 250 260 270 280 290
pF1KB6 SAVTS
>>XP_016862394 (OMIM: 607610) PREDICTED: phospholipid sc (297 aa)
initn: 963 init1: 876 opt: 913 Z-score: 512.0 bits: 102.7 E(85289): 8.8e-22
Smith-Waterman score: 932; 50.0% identity (73.5% similar) in 264 aa overlap (22-284:43-295)
10 20 30 40 50
pF1KB6 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQV-PAPAPGFA
:: . : : : : .:.: :. :
XP_016 SRPPGHIVYPKHQAGHTGKQADHLGSQAFYPGRQHDYLVPPAGTAGIPVQNQPGRPEGVP
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB6 LFPSPGPVALGSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRS
.:.: : :: . : :::.: :::.:::::. : .:.....:. : ::...
XP_016 WMPAPPP----------PL-NCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKN
80 90 100 110 120
120 130 140 150 160 170
pF1KB6 GAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEM
. :: . :::..: : : ::: ::. .:..: :::. : :::.:.: :::: :::.
XP_016 SFGQRIYFAAEDTNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 EVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDES
:.:::::. .:.: ::::: : ::.:.. :. ::.. ::: .:.: . ..::. . ::.
XP_016 EIQAPPGVPVGYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQ
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 RSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGP
::::::.:.:..:::.::::.::.::: ::::..:::..:: :::::::::.
XP_016 IVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERTR
250 260 270 280 290
pF1KB6 SAVTS
>>NP_001186907 (OMIM: 607610) phospholipid scramblase 2 (297 aa)
initn: 963 init1: 876 opt: 913 Z-score: 512.0 bits: 102.7 E(85289): 8.8e-22
Smith-Waterman score: 932; 50.0% identity (73.5% similar) in 264 aa overlap (22-284:43-295)
10 20 30 40 50
pF1KB6 MAGYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQV-PAPAPGFA
:: . : : : : .:.: :. :
NP_001 SRPPGHIVYPKHQAGHTGKQADHLGSQAFYPGRQHDYLVPPAGTAGIPVQNQPGRPEGVP
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB6 LFPSPGPVALGSAAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRS
.:.: : :: . : :::.: :::.:::::. : .:.....:. : ::...
NP_001 WMPAPPP----------PL-NCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKN
80 90 100 110 120
120 130 140 150 160 170
pF1KB6 GAGQPLGQAAEESNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEM
. :: . :::..: : : ::: ::. .:..: :::. : :::.:.: :::: :::.
NP_001 SFGQRIYFAAEDTNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEI
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 EVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDES
:.:::::. .:.: ::::: : ::.:.. :. ::.. ::: .:.: . ..::. . ::.
NP_001 EIQAPPGVPVGYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQ
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB6 RSVGRISKQWGGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGP
::::::.:.:..:::.::::.::.::: ::::..:::..:: :::::::::.
NP_001 IVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERTR
250 260 270 280 290
pF1KB6 SAVTS
295 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:37:42 2016 done: Fri Nov 4 20:37:43 2016
Total Scan time: 8.750 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]