Result of FASTA (ccds) for
pF1KB6336
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6336, 290 aa
1>>>pF1KB6336 290 - 290 aa - 290 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.2053+/-0.000804; mu= 5.1208+/- 0.049
mean_var=211.6065+/-41.349, 0's: 0 Z-trim(115.8): 44 B-trim: 6 in 1/53
Lambda= 0.088168
statistics sampled from 16336 (16380) to 16336 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.795), E-opt: 0.2 (0.503), width: 16
Scan time: 2.710
The best scores are: opt bits E(32554)
CCDS48037.1 SET gene_id:6418|Hs108|chr9 ( 290) 1968 261.9 3.8e-70
CCDS72821.1 SETSIP gene_id:646817|Hs108|chr1 ( 302) 1806 241.4 6.3e-64
CCDS6907.1 SET gene_id:6418|Hs108|chr9 ( 277) 1715 229.7 1.8e-60
CCDS59150.1 SET gene_id:6418|Hs108|chr9 ( 266) 1712 229.3 2.3e-60
CCDS59149.1 SET gene_id:6418|Hs108|chr9 ( 268) 1708 228.8 3.3e-60
CCDS5106.1 TSPYL4 gene_id:23270|Hs108|chr6 ( 414) 520 77.9 1.4e-14
>>CCDS48037.1 SET gene_id:6418|Hs108|chr9 (290 aa)
initn: 1968 init1: 1968 opt: 1968 Z-score: 1372.7 bits: 261.9 E(32554): 3.8e-70
Smith-Waterman score: 1968; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290)
10 20 30 40 50 60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
190 200 210 220 230 240
250 260 270 280 290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
250 260 270 280 290
>>CCDS72821.1 SETSIP gene_id:646817|Hs108|chr1 (302 aa)
initn: 1992 init1: 1664 opt: 1806 Z-score: 1261.1 bits: 241.4 E(32554): 6.3e-64
Smith-Waterman score: 1806; 93.2% identity (95.9% similar) in 294 aa overlap (1-290:11-302)
10 20 30 40 50
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDE
:::::::::: :::::::::::: ::::::::::::::::::::::::::
CCDS72 MVWFLDFPNSMAPKRQSPLPLQKKKPRPPPALGLEETSASAGLPKKGEKEQQEAIEHIDE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 VQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLG
::::::::::: :::::::::::::::::::::::::::::::: :::::::::::.:::
CCDS72 VQNEIDRLNEQDSEEILKVEQKYNKLRQPFFQKRSELIAKIPNFGVTTFVNHPQVSSLLG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 EEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTE
:::::::::::.:::::::::::::::::::::::::::::.:::::::::::::::::.
CCDS72 EEDEEALHYLTKVEVTEFEDIKSGYRIDFYFDENPYFENKVFSKEFHLNESGDPSSKSTK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB6 IKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPL
::::::::.:::::::::::::::::::::::::::::::::::::: ::::::::::::
CCDS72 IKWKSGKDVTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELEEVIKDDIWPNPL
190 200 210 220 230 240
240 250 260 270 280
pF1KB6 QYYLVPDMDDEEGEGEEDDDDDEE----EEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDE
::::::::::::: ::.:::::.. :: :::::: ::::::::::::::::::::::
CCDS72 QYYLVPDMDDEEG-GEDDDDDDDDGDEGEEELEDIDE-GDEDEGEEDEDDDEGEEGEEDE
250 260 270 280 290
290
pF1KB6 GEDD
::::
CCDS72 GEDD
300
>>CCDS6907.1 SET gene_id:6418|Hs108|chr9 (277 aa)
initn: 1715 init1: 1715 opt: 1715 Z-score: 1199.1 bits: 229.7 E(32554): 1.8e-60
Smith-Waterman score: 1715; 96.2% identity (97.4% similar) in 266 aa overlap (25-290:12-277)
10 20 30 40 50 60
pF1KB6 MAPKRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNE
: .: : . .:::::::::::::::::::::::
CCDS69 MSAPAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNE
10 20 30 40
70 80 90 100 110 120
pF1KB6 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 QASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 TRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 KRSSQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDD
170 180 190 200 210 220
250 260 270 280 290
pF1KB6 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 EEGEGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
230 240 250 260 270
>>CCDS59150.1 SET gene_id:6418|Hs108|chr9 (266 aa)
initn: 1712 init1: 1712 opt: 1712 Z-score: 1197.2 bits: 229.3 E(32554): 2.3e-60
Smith-Waterman score: 1712; 98.8% identity (98.8% similar) in 257 aa overlap (34-290:10-266)
10 20 30 40 50 60
pF1KB6 KRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNEQAS
: ::::::::::::::::::::::::::
CCDS59 MMPRSHQPPPPPHEKEQQEAIEHIDEVQNEIDRLNEQAS
10 20 30
70 80 90 100 110 120
pF1KB6 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
160 170 180 190 200 210
250 260 270 280 290
pF1KB6 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
220 230 240 250 260
>>CCDS59149.1 SET gene_id:6418|Hs108|chr9 (268 aa)
initn: 1706 init1: 1706 opt: 1708 Z-score: 1194.4 bits: 228.8 E(32554): 3.3e-60
Smith-Waterman score: 1708; 98.8% identity (98.8% similar) in 257 aa overlap (34-290:12-268)
10 20 30 40 50 60
pF1KB6 KRQSPLPPQKKKPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNEQAS
: ::::::::::::::::::::::::::
CCDS59 MGCRDLLPSLKPTLLEKEQQEAIEHIDEVQNEIDRLNEQAS
10 20 30 40
70 80 90 100 110 120
pF1KB6 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRV
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB6 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB6 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SQTQNKASRKRQHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEG
170 180 190 200 210 220
250 260 270 280 290
pF1KB6 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EGEEDDDDDEEEEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
230 240 250 260
>>CCDS5106.1 TSPYL4 gene_id:23270|Hs108|chr6 (414 aa)
initn: 494 init1: 341 opt: 520 Z-score: 375.3 bits: 77.9 E(32554): 1.4e-14
Smith-Waterman score: 520; 39.3% identity (72.3% similar) in 191 aa overlap (45-235:204-387)
20 30 40 50 60 70
pF1KB6 KPRPPPALGPEETSASAGLPKKGEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYN
.. .. ...:.. .: ::.. .:..:.:..
CCDS51 EEKKVVQKEKKVAGGVKEETRPRAPKINNCMDSLEAIDQELSNVNAQADRAFLQLERKFG
180 190 200 210 220 230
80 90 100 110 120 130
pF1KB6 KLRQPFFQKRSELIAKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSG
..:. .:.:: .: .::.::::.: ::::.: ... .::. :.:. .:: :.. ..:
CCDS51 RMRRLHMQRRSFIIQNIPGFWVTAFRNHPQLSPMISGQDEDMLRYMINLEVEELKHPRAG
240 250 260 270 280 290
140 150 160 170 180 190
pF1KB6 YRIDFYFDENPYFENKVLSKEFHLNESGDPSSKSTEIKWKSGKDLTKRSSQTQNKASRKR
.. : :. ::::.:. : ::.. :: : :: :.:. :.: : . :.:
CCDS51 CKFKFIFQGNPYFRNEGLVKEYERRSSGRVVSLSTPIRWHRGQD-------PQAHIHRNR
300 310 320 330 340
200 210 220 230 240 250
pF1KB6 QHEEPESFFTWFTDHSDAGADELGEVIKDDIWPNPLQYYLVPDMDDEEGEGEEDDDDDEE
. . :::.::.::: :...:.:: ..:::::::::.
CCDS51 EGNTIPSFFNWFSDHSLLEFDRIAEIIKGELWPNPLQYYLMGEGPRRGIRGPPRQPVESA
350 360 370 380 390 400
260 270 280 290
pF1KB6 EEGLEDIDEEGDEDEGEEDEDDDEGEEGEEDEGEDD
CCDS51 RSFRFQSG
410
290 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:45:39 2016 done: Fri Nov 4 22:45:40 2016
Total Scan time: 2.710 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]