Result of FASTA (omim) for
pF1KB6307
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6307, 258 aa
1>>>pF1KB6307 258 - 258 aa - 258 aa
Library: /omim/omim.rfq.tfa
64369986 residues in 92320 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3546+/-0.000299; mu= 12.9610+/- 0.019
mean_var=156.3675+/-30.952, 0's: 0 Z-trim(123.1): 375 B-trim: 1289 in 2/50
Lambda= 0.102565
statistics sampled from 43686 (44104) to 43686 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.478), width: 16
Scan time: 3.560
The best scores are: opt bits E(92320)
NP_067028 (OMIM: 606366) rho-related GTP-binding p ( 258) 1796 276.5 3.5e-74
NP_426359 (OMIM: 116952,616737) cell division cont ( 191) 769 124.4 1.6e-28
NP_001782 (OMIM: 116952,616737) cell division cont ( 191) 769 124.4 1.6e-28
NP_001034891 (OMIM: 116952,616737) cell division c ( 191) 769 124.4 1.6e-28
NP_008839 (OMIM: 602048,617751) ras-related C3 bot ( 192) 715 116.4 4.1e-26
NP_002863 (OMIM: 602049,608203) ras-related C3 bot ( 192) 710 115.7 6.8e-26
NP_005043 (OMIM: 602050,618577) ras-related C3 bot ( 192) 703 114.7 1.4e-25
NP_036381 (OMIM: 605857) rho-related GTP-binding p ( 205) 683 111.7 1.1e-24
NP_065714 (OMIM: 607653) rho-related GTP-binding p ( 214) 661 108.5 1.1e-23
XP_005252973 (OMIM: 179505) rho-related GTP-bindin ( 191) 635 104.6 1.5e-22
XP_016873208 (OMIM: 179505) rho-related GTP-bindin ( 191) 635 104.6 1.5e-22
NP_001656 (OMIM: 179505) rho-related GTP-binding p ( 191) 635 104.6 1.5e-22
NP_001036144 (OMIM: 165380) rho-related GTP-bindin ( 193) 605 100.2 3.3e-21
NP_001036143 (OMIM: 165380) rho-related GTP-bindin ( 193) 605 100.2 3.3e-21
NP_786886 (OMIM: 165380) rho-related GTP-binding p ( 193) 605 100.2 3.3e-21
NP_001303236 (OMIM: 602050,618577) ras-related C3 ( 170) 600 99.4 5e-21
XP_006724349 (OMIM: 602049,608203) ras-related C3 ( 161) 597 98.9 6.6e-21
NP_001655 (OMIM: 165390) transforming protein RhoA ( 193) 593 98.4 1.1e-20
NP_001300870 (OMIM: 165390) transforming protein R ( 193) 593 98.4 1.1e-20
NP_004031 (OMIM: 165370) rho-related GTP-binding p ( 196) 593 98.4 1.1e-20
XP_011531028 (OMIM: 605857) rho-related GTP-bindin ( 192) 571 95.1 1.1e-19
XP_016859205 (OMIM: 605857) rho-related GTP-bindin ( 172) 569 94.8 1.2e-19
XP_006720277 (OMIM: 607653) rho-related GTP-bindin ( 176) 550 92.0 8.6e-19
NP_055393 (OMIM: 605781) rho-related GTP-binding p ( 210) 527 88.7 1e-17
NP_001300872 (OMIM: 165390) transforming protein R ( 187) 497 84.2 2.1e-16
NP_005159 (OMIM: 602924) rho-related GTP-binding p ( 244) 495 84.0 3e-16
NP_001241667 (OMIM: 602924) rho-related GTP-bindin ( 244) 495 84.0 3e-16
NP_005431 (OMIM: 601555) rho-related GTP-binding p ( 227) 481 81.9 1.2e-15
XP_011523618 (OMIM: 601555) rho-related GTP-bindin ( 234) 481 81.9 1.2e-15
XP_011531030 (OMIM: 605857) rho-related GTP-bindin ( 157) 473 80.5 2.2e-15
XP_011511994 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265291 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265295 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265296 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265297 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
XP_016863678 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265289 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
XP_024309810 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
XP_016863677 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_004301 (OMIM: 602037,618307) rho-related GTP-bi ( 191) 471 80.3 3e-15
NP_001265293 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265294 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265292 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265290 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265298 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_001265288 (OMIM: 602037,618307) rho-related GTP ( 191) 471 80.3 3e-15
NP_055285 (OMIM: 609038) rho-related GTP-binding p ( 232) 438 75.5 1e-13
XP_011523619 (OMIM: 601555) rho-related GTP-bindin ( 206) 402 70.2 3.7e-12
NP_001300873 (OMIM: 165390) transforming protein R ( 173) 393 68.7 8.4e-12
NP_061485 (OMIM: 602048,617751) ras-related C3 bot ( 211) 377 66.5 4.9e-11
>>NP_067028 (OMIM: 606366) rho-related GTP-binding prote (258 aa)
initn: 1796 init1: 1796 opt: 1796 Z-score: 1453.4 bits: 276.5 E(92320): 3.5e-74
Smith-Waterman score: 1796; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KB6 MPPQQGDPAFPDRCEAPPVPPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MPPQQGDPAFPDRCEAPPVPPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 GKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 TDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 TDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 KPVPEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 KPVPEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTP
190 200 210 220 230 240
250
pF1KB6 DKMKNLSKSWWKKYCCFV
::::::::::::::::::
NP_067 DKMKNLSKSWWKKYCCFV
250
>>NP_426359 (OMIM: 116952,616737) cell division control (191 aa)
initn: 786 init1: 763 opt: 769 Z-score: 633.7 bits: 124.4 E(92320): 1.6e-28
Smith-Waterman score: 769; 60.2% identity (86.0% similar) in 186 aa overlap (50-234:4-186)
20 30 40 50 60 70
pF1KB6 PPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYI
.:::.::::::::: :..::::: .:.::.
NP_426 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYV
10 20 30
80 90 100 110 120 130
pF1KB6 PTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNV
::.:::....: . :.: : : :::::...:.:::: : .::.::.::::::::::.::
NP_426 PTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 SEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPV-PEEAAKLCAEEIKAA
.::::::: ::::.:..::::: :::.: ... .: : :.::. :: : :: :...::.
NP_426 KEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKL-ARDLKAV
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 SYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDKMKNLSKSWWKKYCCFV
.:.:::::::..::.::: ::.:... .:: ::.
NP_426 KYVECSALTQRGLKNVFDEAILAALEPPETQ--PKRKCCIF
160 170 180 190
>>NP_001782 (OMIM: 116952,616737) cell division control (191 aa)
initn: 792 init1: 753 opt: 769 Z-score: 633.7 bits: 124.4 E(92320): 1.6e-28
Smith-Waterman score: 769; 60.1% identity (85.1% similar) in 188 aa overlap (50-236:4-186)
20 30 40 50 60 70
pF1KB6 PPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYI
.:::.::::::::: :..::::: .:.::.
NP_001 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYV
10 20 30
80 90 100 110 120 130
pF1KB6 PTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNV
::.:::....: . :.: : : :::::...:.:::: : .::.::.::::::::::.::
NP_001 PTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 SEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPV-PEEAAKLCAEEIKAA
.::::::: ::::.:..::::: :::.: ... .: : :.::. :: : :: :...::.
NP_001 KEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKL-ARDLKAV
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 SYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDKMKNLSKSWWKKYCCFV
.:.::::::::.::.::: ::.:... .::::.
NP_001 KYVECSALTQKGLKNVFDEAILAALE----PPEPKKSRRCVLL
160 170 180 190
>>NP_001034891 (OMIM: 116952,616737) cell division contr (191 aa)
initn: 792 init1: 753 opt: 769 Z-score: 633.7 bits: 124.4 E(92320): 1.6e-28
Smith-Waterman score: 769; 60.1% identity (85.1% similar) in 188 aa overlap (50-236:4-186)
20 30 40 50 60 70
pF1KB6 PPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYI
.:::.::::::::: :..::::: .:.::.
NP_001 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYV
10 20 30
80 90 100 110 120 130
pF1KB6 PTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNV
::.:::....: . :.: : : :::::...:.:::: : .::.::.::::::::::.::
NP_001 PTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 SEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPV-PEEAAKLCAEEIKAA
.::::::: ::::.:..::::: :::.: ... .: : :.::. :: : :: :...::.
NP_001 KEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKL-ARDLKAV
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 SYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDKMKNLSKSWWKKYCCFV
.:.::::::::.::.::: ::.:... .::::.
NP_001 KYVECSALTQKGLKNVFDEAILAALE----PPEPKKSRRCVLL
160 170 180 190
>>NP_008839 (OMIM: 602048,617751) ras-related C3 botulin (192 aa)
initn: 707 init1: 707 opt: 715 Z-score: 590.5 bits: 116.4 E(92320): 4.1e-26
Smith-Waterman score: 715; 56.1% identity (79.7% similar) in 187 aa overlap (48-234:2-188)
20 30 40 50 60 70
pF1KB6 PVPPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTE
...:::.::::::::: :..:::::..: :
NP_008 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGE
10 20 30
80 90 100 110 120 130
pF1KB6 YIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQ
::::.:::.:: : :::.:: : : :::::...:.:::: : .::.::.:::.:::.::.
NP_008 YIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFE
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 NVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKA
:: :: ::.: :::..:::::::. :::.: .. .: . : :. . :.:: :
NP_008 NVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGA
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 ASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDKMKNLSKSWWKKYCCF
..:.:::::::..:: ::: :: : . .... .:
NP_008 VKYLECSALTQRGLKTVFDEAIRAVLCPPPVKKRKRKCLLL
160 170 180 190
pF1KB6 V
>>NP_002863 (OMIM: 602049,608203) ras-related C3 botulin (192 aa)
initn: 723 init1: 705 opt: 710 Z-score: 586.5 bits: 115.7 E(92320): 6.8e-26
Smith-Waterman score: 710; 55.9% identity (80.1% similar) in 186 aa overlap (48-233:2-187)
20 30 40 50 60 70
pF1KB6 PVPPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTE
...:::.::::::::: :..:::::..: :
NP_002 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGE
10 20 30
80 90 100 110 120 130
pF1KB6 YIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQ
::::.:::.:: : ::..:: : : :::::...:.:::: : .::.::.:::.:::.:..
NP_002 YIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYE
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 NVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKA
:: :: ::.: :::..:::::::. :::.: .. .: . : :. . :.:: .
NP_002 NVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 ASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDKMKNLSKSWWKKYCCF
..:.:::::::..:: ::: :: : . . :.:: .
NP_002 VKYLECSALTQRGLKTVFDEAIRAVLCPQPTRQQKRACSLL
160 170 180 190
pF1KB6 V
>>NP_005043 (OMIM: 602050,618577) ras-related C3 botulin (192 aa)
initn: 703 init1: 703 opt: 703 Z-score: 580.9 bits: 114.7 E(92320): 1.4e-25
Smith-Waterman score: 703; 55.6% identity (78.6% similar) in 187 aa overlap (48-234:2-188)
20 30 40 50 60 70
pF1KB6 PVPPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTE
...:::.::::::::: :..:::::..: :
NP_005 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGE
10 20 30
80 90 100 110 120 130
pF1KB6 YIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQ
::::.:::.:: : :::.:: : : :::::...:.:::: : .::.::.:::.:::.::.
NP_005 YIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFE
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 NVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKA
:: :: ::.: :::..::.::::. :::.: .. .: : :. . :.:: .
NP_005 NVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGS
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 ASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDKMKNLSKSWWKKYCCF
..:.:::::::..:: ::: :: : . ... ::
NP_005 VKYLECSALTQRGLKTVFDEAIRAVLCPPPVKKPGKKCTVF
160 170 180 190
pF1KB6 V
>>NP_036381 (OMIM: 605857) rho-related GTP-binding prote (205 aa)
initn: 713 init1: 680 opt: 683 Z-score: 564.5 bits: 111.7 E(92320): 1.1e-24
Smith-Waterman score: 683; 55.6% identity (81.7% similar) in 180 aa overlap (45-221:2-181)
20 30 40 50 60 70
pF1KB6 EAPPVPPRRERGGRGGRGPGEPGGRGRAGGAEGRG---VKCVLVGDGAVGKTSLVVSYTT
:.: : .:::.::::::::: :..::..
NP_036 MAHGPGALMLKCVVVGDGAVGKTCLLMSYAN
10 20 30
80 90 100 110 120 130
pF1KB6 NGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVV
...: ::.::.::.... :.: :. : : :::::...:.:::: : ::.::.:::::
NP_036 DAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 SPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLC
.:.:::::.:.::::.. . :..:..:.::: :::.: :.: .:. ::::. : ..
NP_036 NPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKL
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 AEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDKMKNLSKSWW
:.:: : :.::::::::.:: ::: ::.:
NP_036 AKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKHTVKKRIGSRCINCCLIT
160 170 180 190 200
>>NP_065714 (OMIM: 607653) rho-related GTP-binding prote (214 aa)
initn: 657 init1: 636 opt: 661 Z-score: 546.7 bits: 108.5 E(92320): 1.1e-23
Smith-Waterman score: 661; 50.2% identity (76.1% similar) in 205 aa overlap (34-238:6-203)
10 20 30 40 50 60
pF1KB6 QQGDPAFPDRCEAPPVPPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKT
: .. : :. : . .:::.:::::::::
NP_065 MNCKEGTDSSCGCRGNDEKKMLKCVVVGDGAVGKT
10 20 30
70 80 90 100 110 120
pF1KB6 SLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDI
:..::.....: ::.::.::.....:.: :. : : :::::.....:::: : :::.
NP_065 CLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB6 FLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPV
::.:::::.:.:..::.:.::::.. :..: .:.::: :::.: :.: .: ::::.
NP_065 FLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB6 PEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDKM
: . :. : : :.::::::::.:: ::: ::. : .:::.:.:
NP_065 TYEHGVKLAKAIGAQCYLECSALTQKGLKAVFDEAIL-------TIFHPKKKKKRCSEGH
160 170 180 190 200
250
pF1KB6 KNLSKSWWKKYCCFV
NP_065 SCCSII
210
>>XP_005252973 (OMIM: 179505) rho-related GTP-binding pr (191 aa)
initn: 630 init1: 630 opt: 635 Z-score: 526.5 bits: 104.6 E(92320): 1.5e-22
Smith-Waterman score: 635; 52.3% identity (79.3% similar) in 174 aa overlap (48-221:2-175)
20 30 40 50 60 70
pF1KB6 PVPPRRERGGRGGRGPGEPGGRGRAGGAEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTE
...:::.::::::::: :.. ::::..: :
XP_005 MQSIKCVVVGDGAVGKTCLLICYTTNAFPKE
10 20 30
80 90 100 110 120 130
pF1KB6 YIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQ
::::.:::.:: .:::: : :.: :::::.:.:.:: : : .:..:..:::..:: :..
XP_005 YIPTVFDNYSAQSAVDGRTVNLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIASPPSYE
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB6 NVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKA
:: .:: ::. ::: .::.::::..::: . .: .: . . :. . .. :..:.:
XP_005 NVRHKWHPEVCHHCPDVPILLVGTKKDLRAQPDTLRRLKEQGQAPITPQQGQALAKQIHA
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB6 ASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQQPKKSKSRTPDKMKNLSKSWWKKYCCF
. :.::::: : ..:::: :. :
XP_005 VRYLECSALQQDGVKEVFAEAVRAVLNPTPIKRGRSCILL
160 170 180 190
258 residues in 1 query sequences
64369986 residues in 92320 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:30:05 2019 done: Thu Oct 24 21:30:05 2019
Total Scan time: 3.560 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]