Result of FASTA (omim) for
pF1KB6301
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6301, 250 aa
1>>>pF1KB6301 250 - 250 aa - 250 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.6108+/-0.000506; mu= -9.0670+/- 0.032
mean_var=591.3728+/-122.909, 0's: 0 Z-trim(123.7): 62 B-trim: 720 in 1/57
Lambda= 0.052740
statistics sampled from 43987 (44059) to 43987 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.793), E-opt: 0.2 (0.517), width: 16
Scan time: 7.640
The best scores are: opt bits E(85289)
NP_002297 (OMIM: 153619) galectin-3 isoform 1 [Hom ( 250) 1780 149.0 7.6e-36
XP_011535061 (OMIM: 153619) PREDICTED: galectin-3 ( 264) 1780 149.0 7.9e-36
NP_001170859 (OMIM: 153619) galectin-3 isoform 2 [ ( 200) 1272 110.2 2.9e-24
XP_011523098 (OMIM: 601879) PREDICTED: galectin-9 ( 221) 357 40.6 0.0028
XP_006721958 (OMIM: 601879) PREDICTED: galectin-9 ( 234) 357 40.7 0.0029
NP_001317092 (OMIM: 601879) galectin-9 isoform 3 [ ( 246) 357 40.7 0.003
XP_006721956 (OMIM: 601879) PREDICTED: galectin-9 ( 278) 357 40.8 0.0032
XP_006721955 (OMIM: 601879) PREDICTED: galectin-9 ( 311) 357 40.8 0.0034
NP_002299 (OMIM: 601879) galectin-9 isoform short ( 323) 357 40.8 0.0035
XP_016880112 (OMIM: 601879) PREDICTED: galectin-9 ( 343) 357 40.9 0.0036
NP_033665 (OMIM: 601879) galectin-9 isoform long [ ( 355) 357 40.9 0.0037
XP_016856764 (OMIM: 606099) PREDICTED: galectin-8 ( 226) 337 39.1 0.0081
XP_016856763 (OMIM: 606099) PREDICTED: galectin-8 ( 287) 337 39.2 0.0094
NP_963837 (OMIM: 606099) galectin-8 isoform b [Hom ( 317) 337 39.3 0.01
NP_963838 (OMIM: 606099) galectin-8 isoform b [Hom ( 317) 337 39.3 0.01
>>NP_002297 (OMIM: 153619) galectin-3 isoform 1 [Homo sa (250 aa)
initn: 1780 init1: 1780 opt: 1780 Z-score: 764.5 bits: 149.0 E(85289): 7.6e-36
Smith-Waterman score: 1780; 100.0% identity (100.0% similar) in 250 aa overlap (1-250:1-250)
10 20 30 40 50 60
pF1KB6 MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 WGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDI
190 200 210 220 230 240
250
pF1KB6 DLTSASYTMI
::::::::::
NP_002 DLTSASYTMI
250
>>XP_011535061 (OMIM: 153619) PREDICTED: galectin-3 isof (264 aa)
initn: 1780 init1: 1780 opt: 1780 Z-score: 764.2 bits: 149.0 E(85289): 7.9e-36
Smith-Waterman score: 1780; 100.0% identity (100.0% similar) in 250 aa overlap (1-250:15-264)
10 20 30 40
pF1KB6 MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYP
::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MHSKTPCGCFKPWKMADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 GQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGP
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 YGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNEN
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 NRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVK
190 200 210 220 230 240
230 240 250
pF1KB6 KLNEISKLGISGDIDLTSASYTMI
::::::::::::::::::::::::
XP_011 KLNEISKLGISGDIDLTSASYTMI
250 260
>>NP_001170859 (OMIM: 153619) galectin-3 isoform 2 [Homo (200 aa)
initn: 1272 init1: 1272 opt: 1272 Z-score: 556.6 bits: 110.2 E(85289): 2.9e-24
Smith-Waterman score: 1272; 100.0% identity (100.0% similar) in 173 aa overlap (1-173:1-173)
10 20 30 40 50 60
pF1KB6 MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNN
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCTYMCKGF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 WGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDI
NP_001 MFTVSENFYIHQYPSCKSST
190 200
>>XP_011523098 (OMIM: 601879) PREDICTED: galectin-9 isof (221 aa)
initn: 232 init1: 188 opt: 357 Z-score: 179.9 bits: 40.6 E(85289): 0.0028
Smith-Waterman score: 357; 39.0% identity (71.9% similar) in 146 aa overlap (106-247:9-147)
80 90 100 110 120 130
pF1KB6 PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITIL
:: .:: ::.. . ::. . ::.
XP_011 MAFSGSQAPYLSPA----VPFSGTIQGGLQDGLQITVN
10 20 30
140 150 160 170 180 190
pF1KB6 GTV-KPNANRIALDFQRG---NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP
::: . ...:.:..:: : ::.::::::::.... .::::. ...:: :::.. .:
XP_011 GTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFEDGG--YVVCNTRQNGSWGPEERKTHMP
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
:..: :: . ::. . ::: :: ..:: ::: ..... ....:...:. :.
XP_011 FQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVP-FHRVDTISVNGSVQLSYISFQNPR
100 110 120 130 140 150
XP_011 TVPVQPAFSTVPFSQPVCFPPRPRGRRQKARTCLPPEATDVVQASGIPHHDDRGPVPHPL
160 170 180 190 200 210
>>XP_006721958 (OMIM: 601879) PREDICTED: galectin-9 isof (234 aa)
initn: 232 init1: 188 opt: 357 Z-score: 179.6 bits: 40.7 E(85289): 0.0029
Smith-Waterman score: 357; 39.0% identity (71.9% similar) in 146 aa overlap (106-247:9-147)
80 90 100 110 120 130
pF1KB6 PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITIL
:: .:: ::.. . ::. . ::.
XP_006 MAFSGSQAPYLSPA----VPFSGTIQGGLQDGLQITVN
10 20 30
140 150 160 170 180 190
pF1KB6 GTV-KPNANRIALDFQRG---NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP
::: . ...:.:..:: : ::.::::::::.... .::::. ...:: :::.. .:
XP_006 GTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFEDGG--YVVCNTRQNGSWGPEERKTHMP
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
:..: :: . ::. . ::: :: ..:: ::: ..... ....:...:. :.
XP_006 FQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVP-FHRVDTISVNGSVQLSYISFQTQT
100 110 120 130 140 150
XP_006 VIHTVQSAPGQMFSTPAIPPMMYPHPAYPMPFITTILGGLYPSKSILLSGTVLPSAQRCG
160 170 180 190 200 210
>>NP_001317092 (OMIM: 601879) galectin-9 isoform 3 [Homo (246 aa)
initn: 232 init1: 188 opt: 357 Z-score: 179.4 bits: 40.7 E(85289): 0.003
Smith-Waterman score: 357; 39.0% identity (71.9% similar) in 146 aa overlap (106-247:9-147)
80 90 100 110 120 130
pF1KB6 PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITIL
:: .:: ::.. . ::. . ::.
NP_001 MAFSGSQAPYLSPA----VPFSGTIQGGLQDGLQITVN
10 20 30
140 150 160 170 180 190
pF1KB6 GTV-KPNANRIALDFQRG---NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP
::: . ...:.:..:: : ::.::::::::.... .::::. ...:: :::.. .:
NP_001 GTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFEDGG--YVVCNTRQNGSWGPEERKTHMP
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
:..: :: . ::. . ::: :: ..:: ::: ..... ....:...:. :.
NP_001 FQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVP-FHRVDTISVNGSVQLSYISFQPPG
100 110 120 130 140 150
NP_001 VWPANPAPITQTVIHTVQSAPGQMFSTPAIPPMMYPHPAYPMPFITTILGGLYPSKSILL
160 170 180 190 200 210
>>XP_006721956 (OMIM: 601879) PREDICTED: galectin-9 isof (278 aa)
initn: 232 init1: 188 opt: 357 Z-score: 178.8 bits: 40.8 E(85289): 0.0032
Smith-Waterman score: 357; 39.0% identity (71.9% similar) in 146 aa overlap (106-247:9-147)
80 90 100 110 120 130
pF1KB6 PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITIL
:: .:: ::.. . ::. . ::.
XP_006 MAFSGSQAPYLSPA----VPFSGTIQGGLQDGLQITVN
10 20 30
140 150 160 170 180 190
pF1KB6 GTV-KPNANRIALDFQRG---NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP
::: . ...:.:..:: : ::.::::::::.... .::::. ...:: :::.. .:
XP_006 GTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFEDGG--YVVCNTRQNGSWGPEERKTHMP
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
:..: :: . ::. . ::: :: ..:: ::: ..... ....:...:. :.
XP_006 FQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVP-FHRVDTISVNGSVQLSYISFQNPR
100 110 120 130 140 150
XP_006 TVPVQPAFSTVPFSQPVCFPPRPRGRRQKPPGVWPANPAPITQTVIHTVQSAPGQMFSTP
160 170 180 190 200 210
>>XP_006721955 (OMIM: 601879) PREDICTED: galectin-9 isof (311 aa)
initn: 319 init1: 188 opt: 357 Z-score: 178.3 bits: 40.8 E(85289): 0.0034
Smith-Waterman score: 384; 41.2% identity (66.7% similar) in 153 aa overlap (95-243:160-307)
70 80 90 100 110 120
pF1KB6 GAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGP--YGAPAGPLIVPYNLPL
:. . :: : : :: :. :. .
XP_006 RVDTISVNGSVQLSYISFQTQTVIHTVQSAPGQMFSTPAIPPMMYPHPAYPM--PFITTI
130 140 150 160 170 180
130 140 150 160 170 180
pF1KB6 PGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWG
::. : : . ::: :.:.:. ... :: .:::.::::.:: ..: ::..::.::
XP_006 LGGLYPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDEN---AVVRNTQIDNSWG
190 200 210 220 230 240
190 200 210 220 230 240
pF1KB6 REERQ--SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDI
:::. .:: :. :.. .: : .::::. ::..: ::...: :..: ..:::
XP_006 SEERSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDI
250 260 270 280 290 300
250
pF1KB6 DLTSASYTMI
.::
XP_006 QLTHVQT
310
>--
initn: 319 init1: 188 opt: 357 Z-score: 178.3 bits: 40.8 E(85289): 0.0034
Smith-Waterman score: 357; 39.0% identity (71.9% similar) in 146 aa overlap (106-247:9-147)
80 90 100 110 120 130
pF1KB6 PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITIL
:: .:: ::.. . ::. . ::.
XP_006 MAFSGSQAPYLSPA----VPFSGTIQGGLQDGLQITVN
10 20 30
140 150 160 170 180 190
pF1KB6 GTV-KPNANRIALDFQRG---NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP
::: . ...:.:..:: : ::.::::::::.... .::::. ...:: :::.. .:
XP_006 GTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFEDGG--YVVCNTRQNGSWGPEERKTHMP
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
:..: :: . ::. . ::: :: ..:: ::: ..... ....:...:. :.
XP_006 FQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVP-FHRVDTISVNGSVQLSYISFQTQT
100 110 120 130 140 150
XP_006 VIHTVQSAPGQMFSTPAIPPMMYPHPAYPMPFITTILGGLYPSKSILLSGTVLPSAQRFH
160 170 180 190 200 210
>>NP_002299 (OMIM: 601879) galectin-9 isoform short [Hom (323 aa)
initn: 319 init1: 188 opt: 357 Z-score: 178.1 bits: 40.8 E(85289): 0.0035
Smith-Waterman score: 410; 39.7% identity (63.0% similar) in 184 aa overlap (67-243:150-319)
40 50 60 70 80 90
pF1KB6 PGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAP---GVYPGPPSGPGAYPSSG
::..:. ::: : :.:: . :.
NP_002 VQYFHRVPFHRVDTISVNGSVQLSYISFQPPGVWPANPAPITQTVIHTVQSAPGQMFST-
120 130 140 150 160 170
100 110 120 130 140 150
pF1KB6 QPSATGAYPATGP--YGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQR
:: : : :: :. :. . ::. : : . ::: :.:.:. ...
NP_002 --------PAIPPMMYPHPAYPM--PFITTILGGLYPSKSILLSGTVLPSAQRFHINLCS
180 190 200 210 220
160 170 180 190 200
pF1KB6 GNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQ--SVFPFESGKPFKIQVLVEPDHF
:: .:::.::::.:: ..: ::..::.:: :::. .:: :. :.. .: : .
NP_002 GNHIAFHLNPRFDEN---AVVRNTQIDNSWGSEERSLPRKMPFVRGQSFSVWILCEAHCL
230 240 250 260 270 280
210 220 230 240 250
pF1KB6 KVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
::::. ::..: ::...: :..: ..:::.::
NP_002 KVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHVQT
290 300 310 320
>--
initn: 319 init1: 188 opt: 357 Z-score: 178.1 bits: 40.8 E(85289): 0.0035
Smith-Waterman score: 357; 39.0% identity (71.9% similar) in 146 aa overlap (106-247:9-147)
80 90 100 110 120 130
pF1KB6 PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITIL
:: .:: ::.. . ::. . ::.
NP_002 MAFSGSQAPYLSPA----VPFSGTIQGGLQDGLQITVN
10 20 30
140 150 160 170 180 190
pF1KB6 GTV-KPNANRIALDFQRG---NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP
::: . ...:.:..:: : ::.::::::::.... .::::. ...:: :::.. .:
NP_002 GTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFEDGG--YVVCNTRQNGSWGPEERKTHMP
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
:..: :: . ::. . ::: :: ..:: ::: ..... ....:...:. :.
NP_002 FQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVP-FHRVDTISVNGSVQLSYISFQPPG
100 110 120 130 140 150
NP_002 VWPANPAPITQTVIHTVQSAPGQMFSTPAIPPMMYPHPAYPMPFITTILGGLYPSKSILL
160 170 180 190 200 210
>>XP_016880112 (OMIM: 601879) PREDICTED: galectin-9 isof (343 aa)
initn: 319 init1: 188 opt: 357 Z-score: 177.8 bits: 40.9 E(85289): 0.0036
Smith-Waterman score: 395; 36.7% identity (60.2% similar) in 196 aa overlap (60-243:150-339)
30 40 50 60 70 80
pF1KB6 PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAP--APGVYPGPPSG--
: . : : :. .: : .: : :
XP_016 VQYFHRVPFHRVDTISVNGSVQLSYISFQNPRTVPVQP-AFSTVPFSQPVCFPPRPRGRR
120 130 140 150 160 170
90 100 110 120 130
pF1KB6 ----PGAYPSSGQPSATGAYPATGP--YGAPAGPLIVPYNLPLPGGVVPRMLITILGTVK
. .. :. . :: : : :: :. :. . ::. : : . :::
XP_016 QKTQTVIHTVQSAPGQMFSTPAIPPMMYPHPAYPM--PFITTILGGLYPSKSILLSGTVL
180 190 200 210 220 230
140 150 160 170 180 190
pF1KB6 PNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQ--SVFPFESGKP
:.:.:. ... :: .:::.::::.:: ..: ::..::.:: :::. .:: :.
XP_016 PSAQRFHINLCSGNHIAFHLNPRFDEN---AVVRNTQIDNSWGSEERSLPRKMPFVRGQS
240 250 260 270 280 290
200 210 220 230 240 250
pF1KB6 FKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
:.. .: : .::::. ::..: ::...: :..: ..:::.::
XP_016 FSVWILCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHVQT
300 310 320 330 340
>--
initn: 319 init1: 188 opt: 357 Z-score: 177.8 bits: 40.9 E(85289): 0.0036
Smith-Waterman score: 357; 39.0% identity (71.9% similar) in 146 aa overlap (106-247:9-147)
80 90 100 110 120 130
pF1KB6 PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITIL
:: .:: ::.. . ::. . ::.
XP_016 MAFSGSQAPYLSPA----VPFSGTIQGGLQDGLQITVN
10 20 30
140 150 160 170 180 190
pF1KB6 GTV-KPNANRIALDFQRG---NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFP
::: . ...:.:..:: : ::.::::::::.... .::::. ...:: :::.. .:
XP_016 GTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFEDGG--YVVCNTRQNGSWGPEERKTHMP
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 FESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI
:..: :: . ::. . ::: :: ..:: ::: ..... ....:...:. :.
XP_016 FQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVP-FHRVDTISVNGSVQLSYISFQNPR
100 110 120 130 140 150
XP_016 TVPVQPAFSTVPFSQPVCFPPRPRGRRQKTQTVIHTVQSAPGQMFSTPAIPPMMYPHPAY
160 170 180 190 200 210
250 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:39:00 2016 done: Fri Nov 4 19:39:01 2016
Total Scan time: 7.640 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]