Result of FASTA (omim) for
pF1KB6119
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6119, 623 aa
1>>>pF1KB6119 623 - 623 aa - 623 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2049+/-0.00049; mu= 20.6276+/- 0.031
mean_var=353.6800+/-75.224, 0's: 0 Z-trim(118.9): 198 B-trim: 0 in 0/55
Lambda= 0.068198
statistics sampled from 32204 (32430) to 32204 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.38), width: 16
Scan time: 8.970
The best scores are: opt bits E(85289)
XP_005248694 (OMIM: 616686) PREDICTED: heterogeneo ( 623) 4267 434.7 4.7e-121
NP_006363 (OMIM: 616686) heterogeneous nuclear rib ( 623) 4267 434.7 4.7e-121
XP_016865666 (OMIM: 616686) PREDICTED: heterogeneo ( 604) 4074 415.6 2.4e-115
XP_016865665 (OMIM: 616686) PREDICTED: heterogeneo ( 605) 4073 415.5 2.6e-115
NP_001153148 (OMIM: 616686) heterogeneous nuclear ( 561) 3745 383.2 1.3e-105
XP_005248692 (OMIM: 616686) PREDICTED: heterogeneo ( 561) 3745 383.2 1.3e-105
XP_016865668 (OMIM: 616686) PREDICTED: heterogeneo ( 561) 3745 383.2 1.3e-105
XP_016865667 (OMIM: 616686) PREDICTED: heterogeneo ( 562) 3734 382.1 2.8e-105
NP_001153149 (OMIM: 616686) heterogeneous nuclear ( 562) 3734 382.1 2.8e-105
XP_005248693 (OMIM: 616686) PREDICTED: heterogeneo ( 525) 3641 372.9 1.5e-102
NP_005817 (OMIM: 607201) heterogeneous nuclear rib ( 633) 3551 364.2 7.7e-100
XP_005245768 (OMIM: 607201) PREDICTED: heterogeneo ( 633) 3551 364.2 7.7e-100
XP_011538773 (OMIM: 607201) PREDICTED: heterogeneo ( 636) 3294 338.9 3.1e-92
NP_001095868 (OMIM: 607201) heterogeneous nuclear ( 636) 3294 338.9 3.1e-92
XP_016865669 (OMIM: 616686) PREDICTED: heterogeneo ( 463) 3119 321.5 4.2e-87
NP_001153145 (OMIM: 616686) heterogeneous nuclear ( 464) 3108 320.4 8.9e-87
NP_001095867 (OMIM: 607201) heterogeneous nuclear ( 532) 3100 319.7 1.6e-86
NP_001095869 (OMIM: 607201) heterogeneous nuclear ( 535) 3084 318.1 4.8e-86
NP_001284551 (OMIM: 607201) heterogeneous nuclear ( 494) 2710 281.3 5.6e-75
XP_016855497 (OMIM: 607201) PREDICTED: heterogeneo ( 595) 2711 281.5 5.6e-75
NP_001284549 (OMIM: 607201) heterogeneous nuclear ( 595) 2711 281.5 5.6e-75
XP_011538778 (OMIM: 607201) PREDICTED: heterogeneo ( 497) 2694 279.7 1.7e-74
XP_011538777 (OMIM: 607201) PREDICTED: heterogeneo ( 598) 2695 280.0 1.7e-74
XP_011538776 (OMIM: 607201) PREDICTED: heterogeneo ( 598) 2695 280.0 1.7e-74
NP_001240700 (OMIM: 616686) heterogeneous nuclear ( 410) 2682 278.4 3.5e-74
NP_001284550 (OMIM: 607201) heterogeneous nuclear ( 473) 2333 244.1 8e-64
XP_016855498 (OMIM: 607201) PREDICTED: heterogeneo ( 574) 2333 244.3 8.7e-64
XP_016855499 (OMIM: 607201) PREDICTED: heterogeneo ( 574) 2333 244.3 8.7e-64
XP_011538779 (OMIM: 607201) PREDICTED: heterogeneo ( 476) 2317 242.6 2.4e-63
XP_011538774 (OMIM: 607201) PREDICTED: heterogeneo ( 577) 2317 242.7 2.6e-63
NP_001153147 (OMIM: 616686) heterogeneous nuclear ( 588) 2058 217.3 1.2e-55
NP_001153146 (OMIM: 616686) heterogeneous nuclear ( 527) 2024 213.8 1.2e-54
NP_919225 (OMIM: 609385) dead end protein homolog ( 353) 463 59.9 1.7e-08
XP_006722896 (OMIM: 612680) PREDICTED: CUGBP Elav- ( 484) 287 42.9 0.0032
NP_001166144 (OMIM: 612680) CUGBP Elav-like family ( 409) 285 42.5 0.0034
NP_068757 (OMIM: 612680) CUGBP Elav-like family me ( 485) 285 42.7 0.0037
XP_006722895 (OMIM: 612680) PREDICTED: CUGBP Elav- ( 485) 285 42.7 0.0037
>>XP_005248694 (OMIM: 616686) PREDICTED: heterogeneous n (623 aa)
initn: 4267 init1: 4267 opt: 4267 Z-score: 2294.3 bits: 434.7 E(85289): 4.7e-121
Smith-Waterman score: 4267; 100.0% identity (100.0% similar) in 623 aa overlap (1-623:1-623)
10 20 30 40 50 60
pF1KB6 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
550 560 570 580 590 600
610 620
pF1KB6 SGNYGYKSENQEFYQDTFGQQWK
:::::::::::::::::::::::
XP_005 SGNYGYKSENQEFYQDTFGQQWK
610 620
>>NP_006363 (OMIM: 616686) heterogeneous nuclear ribonuc (623 aa)
initn: 4267 init1: 4267 opt: 4267 Z-score: 2294.3 bits: 434.7 E(85289): 4.7e-121
Smith-Waterman score: 4267; 100.0% identity (100.0% similar) in 623 aa overlap (1-623:1-623)
10 20 30 40 50 60
pF1KB6 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
550 560 570 580 590 600
610 620
pF1KB6 SGNYGYKSENQEFYQDTFGQQWK
:::::::::::::::::::::::
NP_006 SGNYGYKSENQEFYQDTFGQQWK
610 620
>>XP_016865666 (OMIM: 616686) PREDICTED: heterogeneous n (604 aa)
initn: 4073 init1: 4073 opt: 4074 Z-score: 2191.7 bits: 415.6 E(85289): 2.4e-115
Smith-Waterman score: 4074; 99.3% identity (99.3% similar) in 602 aa overlap (1-602:1-602)
10 20 30 40 50 60
pF1KB6 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGKRG
550 560 570 580 590 600
610 620
pF1KB6 SGNYGYKSENQEFYQDTFGQQWK
:
XP_016 RGRS
>>XP_016865665 (OMIM: 616686) PREDICTED: heterogeneous n (605 aa)
initn: 4230 init1: 4073 opt: 4073 Z-score: 2191.2 bits: 415.5 E(85289): 2.6e-115
Smith-Waterman score: 4073; 99.8% identity (100.0% similar) in 598 aa overlap (1-598:1-598)
10 20 30 40 50 60
pF1KB6 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
XP_016 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQAGKR
550 560 570 580 590 600
610 620
pF1KB6 SGNYGYKSENQEFYQDTFGQQWK
XP_016 GRGRS
>>NP_001153148 (OMIM: 616686) heterogeneous nuclear ribo (561 aa)
initn: 3980 init1: 3745 opt: 3745 Z-score: 2017.0 bits: 383.2 E(85289): 1.3e-105
Smith-Waterman score: 3745; 99.1% identity (99.8% similar) in 556 aa overlap (1-556:1-556)
10 20 30 40 50 60
pF1KB6 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
::::::::: .:...:
NP_001 GAQQQRGRGGKGVEAGPDLLQ
550 560
>>XP_005248692 (OMIM: 616686) PREDICTED: heterogeneous n (561 aa)
initn: 3980 init1: 3745 opt: 3745 Z-score: 2017.0 bits: 383.2 E(85289): 1.3e-105
Smith-Waterman score: 3745; 99.1% identity (99.8% similar) in 556 aa overlap (1-556:1-556)
10 20 30 40 50 60
pF1KB6 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
::::::::: .:...:
XP_005 GAQQQRGRGGKGVEAGPDLLQ
550 560
>>XP_016865668 (OMIM: 616686) PREDICTED: heterogeneous n (561 aa)
initn: 3980 init1: 3745 opt: 3745 Z-score: 2017.0 bits: 383.2 E(85289): 1.3e-105
Smith-Waterman score: 3745; 99.1% identity (99.8% similar) in 556 aa overlap (1-556:1-556)
10 20 30 40 50 60
pF1KB6 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
::::::::: .:...:
XP_016 GAQQQRGRGGKGVEAGPDLLQ
550 560
>>XP_016865667 (OMIM: 616686) PREDICTED: heterogeneous n (562 aa)
initn: 3730 init1: 3730 opt: 3734 Z-score: 2011.2 bits: 382.1 E(85289): 2.8e-105
Smith-Waterman score: 3734; 98.9% identity (99.6% similar) in 557 aa overlap (1-556:1-557)
10 20 30 40 50 60
pF1KB6 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
490 500 510 520 530 540
550 560 570 580 590
pF1KB6 GAQQQRGRGV-RGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGD
::::::::: .:...:
XP_016 GAQQQRGRGQGKGVEAGPDLLQ
550 560
>>NP_001153149 (OMIM: 616686) heterogeneous nuclear ribo (562 aa)
initn: 3730 init1: 3730 opt: 3734 Z-score: 2011.2 bits: 382.1 E(85289): 2.8e-105
Smith-Waterman score: 3734; 98.9% identity (99.6% similar) in 557 aa overlap (1-556:1-557)
10 20 30 40 50 60
pF1KB6 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
490 500 510 520 530 540
550 560 570 580 590
pF1KB6 GAQQQRGRGV-RGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGD
::::::::: .:...:
NP_001 GAQQQRGRGQGKGVEAGPDLLQ
550 560
>>XP_005248693 (OMIM: 616686) PREDICTED: heterogeneous n (525 aa)
initn: 3641 init1: 3641 opt: 3641 Z-score: 1962.0 bits: 372.9 E(85289): 1.5e-102
Smith-Waterman score: 3641; 100.0% identity (100.0% similar) in 525 aa overlap (99-623:1-525)
70 80 90 100 110 120
pF1KB6 NEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPDEAKIKALL
::::::::::::::::::::::::::::::
XP_005 MKTYRQREKQGTKVADSSKGPDEAKIKALL
10 20 30
130 140 150 160 170 180
pF1KB6 ERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPI
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB6 WDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVG
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB6 SIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMS
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB6 GKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERVK
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB6 KLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQMY
280 290 300 310 320 330
430 440 450 460 470 480
pF1KB6 DDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDPYYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDPYYGY
340 350 360 370 380 390
490 500 510 520 530 540
pF1KB6 EDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGR
400 410 420 430 440 450
550 560 570 580 590 600
pF1KB6 GVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDHSGNYGYKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDHSGNYGYKS
460 470 480 490 500 510
610 620
pF1KB6 ENQEFYQDTFGQQWK
:::::::::::::::
XP_005 ENQEFYQDTFGQQWK
520
623 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:56:44 2016 done: Sat Nov 5 10:56:45 2016
Total Scan time: 8.970 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]