Result of FASTA (omim) for
pF1KB5924
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5924, 520 aa
1>>>pF1KB5924 520 - 520 aa - 520 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7890+/-0.00041; mu= 15.3521+/- 0.025
mean_var=66.2598+/-12.993, 0's: 0 Z-trim(111.0): 27 B-trim: 0 in 0/51
Lambda= 0.157561
statistics sampled from 19477 (19489) to 19477 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.229), width: 16
Scan time: 10.280
The best scores are: opt bits E(85289)
NP_060627 (OMIM: 609147) synembryn-B isoform 4 [Ho ( 520) 3369 775.1 0
NP_001317076 (OMIM: 609147) synembryn-B isoform 3 ( 536) 3145 724.2 2.4e-208
NP_001317074 (OMIM: 609147) synembryn-B isoform 1 ( 560) 3145 724.2 2.5e-208
XP_016875038 (OMIM: 609147) PREDICTED: synembryn-B ( 504) 3093 712.4 8.1e-205
XP_011536831 (OMIM: 609147) PREDICTED: synembryn-B ( 524) 3093 712.4 8.4e-205
XP_011536830 (OMIM: 609147) PREDICTED: synembryn-B ( 540) 2869 661.5 1.8e-189
NP_001317075 (OMIM: 609147) synembryn-B isoform 2 ( 544) 2869 661.5 1.8e-189
XP_011536828 (OMIM: 609147) PREDICTED: synembryn-B ( 564) 2869 661.5 1.9e-189
XP_016873596 (OMIM: 609146) PREDICTED: synembryn-A ( 421) 671 161.8 3.7e-39
NP_001273063 (OMIM: 609146) synembryn-A isoform 2 ( 531) 671 161.8 4.6e-39
XP_005253109 (OMIM: 609146) PREDICTED: synembryn-A ( 535) 671 161.8 4.6e-39
NP_068751 (OMIM: 609146) synembryn-A isoform 1 [Ho ( 537) 650 157.0 1.3e-37
>>NP_060627 (OMIM: 609147) synembryn-B isoform 4 [Homo s (520 aa)
initn: 3369 init1: 3369 opt: 3369 Z-score: 4137.0 bits: 775.1 E(85289): 0
Smith-Waterman score: 3369; 100.0% identity (100.0% similar) in 520 aa overlap (1-520:1-520)
10 20 30 40 50 60
pF1KB5 MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
430 440 450 460 470 480
490 500 510 520
pF1KB5 AKPKEELLKPMGLKPDGTITPLEEALNQYSVIEETSSDTD
::::::::::::::::::::::::::::::::::::::::
NP_060 AKPKEELLKPMGLKPDGTITPLEEALNQYSVIEETSSDTD
490 500 510 520
>>NP_001317076 (OMIM: 609147) synembryn-B isoform 3 [Hom (536 aa)
initn: 3165 init1: 3139 opt: 3145 Z-score: 3861.6 bits: 724.2 E(85289): 2.4e-208
Smith-Waterman score: 3145; 94.9% identity (97.1% similar) in 514 aa overlap (1-513:1-514)
10 20 30 40 50 60
pF1KB5 MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
430 440 450 460 470 480
490 500 510 520
pF1KB5 AKPKEELLKPMGLKP-DGTITPLEEALNQYSVIEETSSDTD
:::. .:. .: . : . : ..: ...
NP_001 AKPNINLITGHLEEPMPNPIDEMTEEQKEYEAMKLVNMLDKLSRRADVKDLHQDGG
490 500 510 520 530
>>NP_001317074 (OMIM: 609147) synembryn-B isoform 1 [Hom (560 aa)
initn: 3381 init1: 3139 opt: 3145 Z-score: 3861.3 bits: 724.2 E(85289): 2.5e-208
Smith-Waterman score: 3228; 92.6% identity (92.8% similar) in 552 aa overlap (1-512:1-552)
10 20 30 40 50 60
pF1KB5 MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
430 440 450 460 470 480
490 500
pF1KB5 AKP----------------------------------------KEELLKPMGLKPDGTIT
::: .::::::::::::::::
NP_001 AKPNINLITGHLEEPMPNPIDEMTEEQKEYEAMKLVNMLDKLSREELLKPMGLKPDGTIT
490 500 510 520 530 540
510 520
pF1KB5 PLEEALNQYSVIEETSSDTD
::::::::::::
NP_001 PLEEALNQYSVIEETSSDTD
550 560
>>XP_016875038 (OMIM: 609147) PREDICTED: synembryn-B iso (504 aa)
initn: 3093 init1: 3093 opt: 3093 Z-score: 3798.1 bits: 712.4 E(85289): 8.1e-205
Smith-Waterman score: 3221; 96.9% identity (96.9% similar) in 520 aa overlap (1-520:1-504)
10 20 30 40 50 60
pF1KB5 MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPT
:::::::::::::::::::::::::::: ::::::::::::::::
XP_016 MDEERALYIVRAGEAGAIERVLRDYSDK----------------KLCEGIFKVLIKDIPT
10 20 30 40
70 80 90 100 110 120
pF1KB5 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
410 420 430 440 450 460
490 500 510 520
pF1KB5 AKPKEELLKPMGLKPDGTITPLEEALNQYSVIEETSSDTD
::::::::::::::::::::::::::::::::::::::::
XP_016 AKPKEELLKPMGLKPDGTITPLEEALNQYSVIEETSSDTD
470 480 490 500
>>XP_011536831 (OMIM: 609147) PREDICTED: synembryn-B iso (524 aa)
initn: 3089 init1: 3089 opt: 3093 Z-score: 3797.9 bits: 712.4 E(85289): 8.4e-205
Smith-Waterman score: 3093; 98.4% identity (99.6% similar) in 485 aa overlap (36-520:40-524)
10 20 30 40 50 60
pF1KB5 ALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPTTCQVS
..:... .:::::::::::::::::::::
XP_011 GTVKEKCLPGSNIFFLLPALGSKSPISEVKDTTNNQVIQKLCEGIFKVLIKDIPTTCQVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 CLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKCLCNIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKCLCNIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 FNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRSQLRYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRSQLRYE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEET
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 AQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYREGLTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYREGLTP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 EFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPKE
430 440 450 460 470 480
490 500 510 520
pF1KB5 ELLKPMGLKPDGTITPLEEALNQYSVIEETSSDTD
:::::::::::::::::::::::::::::::::::
XP_011 ELLKPMGLKPDGTITPLEEALNQYSVIEETSSDTD
490 500 510 520
>>XP_011536830 (OMIM: 609147) PREDICTED: synembryn-B iso (540 aa)
initn: 2883 init1: 2857 opt: 2869 Z-score: 3522.5 bits: 661.5 E(85289): 1.8e-189
Smith-Waterman score: 2869; 92.9% identity (96.5% similar) in 479 aa overlap (36-513:40-518)
10 20 30 40 50 60
pF1KB5 ALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPTTCQVS
..:... .:::::::::::::::::::::
XP_011 GTVKEKCLPGSNIFFLLPALGSKSPISEVKDTTNNQVIQKLCEGIFKVLIKDIPTTCQVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 CLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKCLCNIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKCLCNIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 FNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRSQLRYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRSQLRYE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEET
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 AQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYREGLTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYREGLTP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 EFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 EFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNI
430 440 450 460 470 480
490 500 510 520
pF1KB5 ELLKPMGLKP-DGTITPLEEALNQYSVIEETSSDTD
.:. .: . : . : ..: ...
XP_011 NLITGHLEEPMPNPIDEMTEEQKEYEAMKLVNMLDKLSRRADVKDLHQDGG
490 500 510 520 530 540
>>NP_001317075 (OMIM: 609147) synembryn-B isoform 2 [Hom (544 aa)
initn: 3267 init1: 2863 opt: 2869 Z-score: 3522.4 bits: 661.5 E(85289): 1.8e-189
Smith-Waterman score: 3080; 89.7% identity (89.9% similar) in 552 aa overlap (1-512:1-536)
10 20 30 40 50 60
pF1KB5 MDEERALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPT
:::::::::::::::::::::::::::: ::::::::::::::::
NP_001 MDEERALYIVRAGEAGAIERVLRDYSDK----------------KLCEGIFKVLIKDIPT
10 20 30 40
70 80 90 100 110 120
pF1KB5 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKC
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVD
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SWKVHKESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPL
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYR
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGV
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKN
410 420 430 440 450 460
490 500
pF1KB5 AKP----------------------------------------KEELLKPMGLKPDGTIT
::: .::::::::::::::::
NP_001 AKPNINLITGHLEEPMPNPIDEMTEEQKEYEAMKLVNMLDKLSREELLKPMGLKPDGTIT
470 480 490 500 510 520
510 520
pF1KB5 PLEEALNQYSVIEETSSDTD
::::::::::::
NP_001 PLEEALNQYSVIEETSSDTD
530 540
>>XP_011536828 (OMIM: 609147) PREDICTED: synembryn-B iso (564 aa)
initn: 3099 init1: 2857 opt: 2869 Z-score: 3522.2 bits: 661.5 E(85289): 1.9e-189
Smith-Waterman score: 2952; 90.5% identity (91.9% similar) in 517 aa overlap (36-512:40-556)
10 20 30 40 50 60
pF1KB5 ALYIVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIPTTCQVS
..:... .:::::::::::::::::::::
XP_011 GTVKEKCLPGSNIFFLLPALGSKSPISEVKDTTNNQVIQKLCEGIFKVLIKDIPTTCQVS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 CLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKCLCNIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKCLCNIV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 FNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRSQLRYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRSQLRYE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQGLPLLTQILESAFSIKWTDEYESAIDHNGPPLSPQETDCAIEALKALFNVTVDSWKVH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 KESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEET
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 AQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYREGLTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYREGLTP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 VLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 EFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKP--
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNI
430 440 450 460 470 480
490 500
pF1KB5 --------------------------------------KEELLKPMGLKPDGTITPLEEA
.:::::::::::::::::::::
XP_011 NLITGHLEEPMPNPIDEMTEEQKEYEAMKLVNMLDKLSREELLKPMGLKPDGTITPLEEA
490 500 510 520 530 540
510 520
pF1KB5 LNQYSVIEETSSDTD
:::::::
XP_011 LNQYSVIEETSSDTD
550 560
>>XP_016873596 (OMIM: 609146) PREDICTED: synembryn-A iso (421 aa)
initn: 1145 init1: 671 opt: 671 Z-score: 824.0 bits: 161.8 E(85289): 3.7e-39
Smith-Waterman score: 1120; 52.0% identity (74.8% similar) in 373 aa overlap (113-482:3-340)
90 100 110 120 130 140
pF1KB5 VTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLKCLCNIVFNSQMAQQLSLELNLAA
:..::::::::.:..: .::.:. : :..
XP_016 MDVVLESLKCLCNLVLSSPVAQMLAAEARLVV
10 20 30
150 160 170 180 190 200
pF1KB5 KLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRSQLRYELQGLPLLTQILESAFSI
:: . . ..:.: .:.. :::::::::. :.::.:.:: ::.:. :::. :: ....
XP_016 KLTERVGLYRERSFPHDVQFFDLRLLFLLTALRTDVRQQLFQELKGVRLLTDTLELTLGV
40 50 60 70 80 90
210 220 230 240 250
pF1KB5 KWTDEYESAIDHNGPP--LSPQETDCAIEALKALFNVTVDSWKVH-KESDSHQFRVMAAV
: : : :: : :::. :.: ::.:::.:.:: : . : :. .: ....
XP_016 --TPE------GNPPPTLLPSQETERAMEILKVLFNITLDSIKGEVDEEDAALYRHLGTL
100 110 120 130 140
260 270 280 290 300 310
pF1KB5 LRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVLICPLTHEETAQEATTLDELPSNK
::::..:. . :.:::.:..:::::.:.:..:::::. ::. : .
XP_016 LRHCVMIA-TAGDRTEEFHGHAVNLLGNLPLKCLDVLL-------------TLE--PHGD
150 160 170 180
320 330 340 350 360 370
pF1KB5 TAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKGSSYREGLTPVLSLLTECSRAHRN
..: . :.::..:..:: :.:::. : .:...::::.::::.: ::
XP_016 STE-----------FMGVNMDVIRALLIFLEKRLHKTHRLKESVAPVLSVLTECARMHRP
190 200 210 220 230
380 390 400 410 420 430
pF1KB5 IRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHVDLGVKQIAAEFLFVLCKERVDSL
::::: ::::::::: .::::: .::::::::::.: ::..:::::::::.: : .
XP_016 ARKFLKAQVLPPLRDVRTRPEVGEMLRNKLVRLMTHLDTDVKRVAAEFLFVLCSESVPRF
240 250 260 270 280 290
440 450 460 470 480 490
pF1KB5 LKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPKEELLKPMGLKPDGTI
.:::::::::::::::::.:::: .. :::::::::.:::.::
XP_016 IKYTGYGNAAGLLAARGLMAGGRPEGQYSEDEDTDTDEYKEAKASINPVTGRVEEKPPNP
300 310 320 330 340 350
500 510 520
pF1KB5 TPLEEALNQYSVIEETSSDTD
XP_016 MEGMTEEQKEHEAMKLVTMFDKLSRNRVIQPMGMSPRGHLTSLQDAMCETMEQQLSSDPD
360 370 380 390 400 410
>>NP_001273063 (OMIM: 609146) synembryn-A isoform 2 [Hom (531 aa)
initn: 1338 init1: 671 opt: 671 Z-score: 822.3 bits: 161.8 E(85289): 4.6e-39
Smith-Waterman score: 1316; 47.3% identity (73.3% similar) in 484 aa overlap (3-482:2-450)
10 20 30 40 50
pF1KB5 MDEERALY-IVRAGEAGAIERVLRDYSDKHRATFKFESTDEDKRKKLCEGIFKVLIKDIP
: ::. :..:: .: ..::.:...: .: :...... ::.: : . .:: . .:
NP_001 MEPRAVAEAVETGEEDVIMEALRSYNQEHSQSFTFDDAQQEDRKRLAELLVSVLEQGLP
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 TTCQVSCLEVLRILSRDKKVLVPVTTKENMQILLRLAKLNELDDSLEKVSEFPVIVESLK
. .: :. .::::::.. : : :.....: : : .. . :. . ... :..::::
NP_001 PSHRVIWLQSVRILSRDRNCLDPFTSRQSLQALACYADISVSEGSVPESADMDVVLESLK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 CLCNIVFNSQMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIR
::::.:..: .::.:. : :..:: . . ..:.: .:.. :::::::::. :.::.:
NP_001 CLCNLVLSSPVAQMLAAEARLVVKLTERVGLYRERSFPHDVQFFDLRLLFLLTALRTDVR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 SQLRYELQGLPLLTQILESAFSIKWTDEYESAIDHNGPP--LSPQETDCAIEALKALFNV
.:: ::.:. :::. :: .... : : : :: : :::. :.: ::.:::.
NP_001 QQLFQELKGVRLLTDTLELTLGV--TPE------GNPPPTLLPSQETERAMEILKVLFNI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 TVDSWKVH-KESDSHQFRVMAAVLRHCLLIVGPTEDKTEELHSNAVNLLSNVPVSCLDVL
:.:: : . : :. .: ....::::..:. . :.:::.:..:::::.:.:..:::::
NP_001 TLDSIKGEVDEEDAALYRHLGTLLRHCVMIA-TAGDRTEEFHGHAVNLLGNLPLKCLDVL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 ICPLTHEETAQEATTLDELPSNKTAEKETVLKNNTMVYNGMNMEAIHVLLNFMEKRIDKG
. ::. : . ..: . :.::..:..:: :.:::. :
NP_001 L-------------TLE--PHGDSTE-----------FMGVNMDVIRALLIFLEKRLHKT
300 310 320
360 370 380 390 400 410
pF1KB5 SSYREGLTPVLSLLTECSRAHRNIRKFLKDQVLPPLRDVTNRPEVGSTVRNKLVRLMTHV
.:...::::.::::.: :: ::::: ::::::::: .::::: .::::::::::.
NP_001 HRLKESVAPVLSVLTECARMHRPARKFLKAQVLPPLRDVRTRPEVGEMLRNKLVRLMTHL
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB5 DLGVKQIAAEFLFVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTE
: ::..:::::::::.: : ..:::::::::::::::::.:::: .. :::::::::.
NP_001 DTDVKRVAAEFLFVLCSESVPRFIKYTGYGNAAGLLAARGLMAGGRPEGQYSEDEDTDTD
390 400 410 420 430 440
480 490 500 510 520
pF1KB5 EYKNAKPKEELLKPMGLKPDGTITPLEEALNQYSVIEETSSDTD
:::.::
NP_001 EYKEAKASINPVTGRVEEKPPNPMEGMTEEQKEHEAMKLVTMFDKLSRNRVIQPMGMSPR
450 460 470 480 490 500
520 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 04:48:24 2016 done: Mon Nov 7 04:48:25 2016
Total Scan time: 10.280 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]