Result of FASTA (ccds) for
pF1KB5867
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5867, 462 aa
1>>>pF1KB5867 462 - 462 aa - 462 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.0105+/-0.000867; mu= -3.3651+/- 0.052
mean_var=239.3353+/-49.593, 0's: 0 Z-trim(115.5): 9 B-trim: 291 in 2/52
Lambda= 0.082903
statistics sampled from 16070 (16078) to 16070 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.494), width: 16
Scan time: 2.450
The best scores are: opt bits E(32554)
CCDS94.1 ERRFI1 gene_id:54206|Hs108|chr1 ( 462) 3200 395.3 6.8e-110
CCDS33928.1 TNK2 gene_id:10188|Hs108|chr3 (1038) 481 70.3 1e-11
CCDS77875.1 TNK2 gene_id:10188|Hs108|chr3 (1040) 481 70.3 1e-11
CCDS33927.1 TNK2 gene_id:10188|Hs108|chr3 (1086) 481 70.3 1.1e-11
>>CCDS94.1 ERRFI1 gene_id:54206|Hs108|chr1 (462 aa)
initn: 3200 init1: 3200 opt: 3200 Z-score: 2086.4 bits: 395.3 E(32554): 6.8e-110
Smith-Waterman score: 3200; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)
10 20 30 40 50 60
pF1KB5 MSIAGVAAQEIRVPLKTGFLHNGRAMGNMRKTYWSSRSEFKNNFLNIDPITMAYSLNSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 MSIAGVAAQEIRVPLKTGFLHNGRAMGNMRKTYWSSRSEFKNNFLNIDPITMAYSLNSSA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 QERLIPLGHASKSAPMNGHCFAENGPSQKSSLPPLLIPPSENLGPHEEDQVVCGFKKLTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 QERLIPLGHASKSAPMNGHCFAENGPSQKSSLPPLLIPPSENLGPHEEDQVVCGFKKLTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 NGVCASTPPLTPIKNSPSLFPCAPLCERGSRPLPPLPISEALSLDDTDCEVEFLTSSDTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 NGVCASTPPLTPIKNSPSLFPCAPLCERGSRPLPPLPISEALSLDDTDCEVEFLTSSDTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 FLLEDSTLSDFKYDVPGRRSFRGCGQINYAYFDTPAVSAADLSYVSDQNGGVPDPNPPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 FLLEDSTLSDFKYDVPGRRSFRGCGQINYAYFDTPAVSAADLSYVSDQNGGVPDPNPPPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QTHRRLRRSHSGPAGSFNKPAIRISNCCIHRASPNSDEDKPEVPPRVPIPPRPVKPDYRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 QTHRRLRRSHSGPAGSFNKPAIRISNCCIHRASPNSDEDKPEVPPRVPIPPRPVKPDYRR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 WSAEVTSSTYSDEDRPPKVPPREPLSPSNSRTPSPKSLPSYLNGVMPPTQSFAPDPKYVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 WSAEVTSSTYSDEDRPPKVPPREPLSPSNSRTPSPKSLPSYLNGVMPPTQSFAPDPKYVS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 SKALQRQNSEGSASKVPCILPIIENGKKVSSTHYYLLPERPPYLDKYEKFFREAEETNGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS94 SKALQRQNSEGSASKVPCILPIIENGKKVSSTHYYLLPERPPYLDKYEKFFREAEETNGG
370 380 390 400 410 420
430 440 450 460
pF1KB5 AQIQPLPADCGISSATEKPDSKTKMDLGGHVKRKHLSYVVSP
::::::::::::::::::::::::::::::::::::::::::
CCDS94 AQIQPLPADCGISSATEKPDSKTKMDLGGHVKRKHLSYVVSP
430 440 450 460
>>CCDS33928.1 TNK2 gene_id:10188|Hs108|chr3 (1038 aa)
initn: 669 init1: 222 opt: 481 Z-score: 323.7 bits: 70.3 E(32554): 1e-11
Smith-Waterman score: 665; 33.1% identity (56.1% similar) in 483 aa overlap (2-427:445-889)
10 20 30
pF1KB5 MSIAGVAAQEIRVPLKTGFLHNGRAMGNMRK
:.::..::.: ::...:.:.:.. .. :.
CCDS33 VIEGRAENYWWRGQNTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRH
420 430 440 450 460 470
40 50 60 70 80
pF1KB5 TYWSSRSEFKNNFLN--IDPITMAYSLNSSAQERLIPLGHASKSA---------PMNGHC
:. ... . .:. .:: . :.. :... :: ..: . :...
CCDS33 C-WGFPDRIDELYLGNPMDPPDL-LSVELSTSRPPQHLGGVKKPTYDPVSEDQDPLSSD-
480 490 500 510 520 530
90 100 110
pF1KB5 FAENG---PSQKSSL----PPLLIPPSE---------NLGPHEEDQVV-----CG--FKK
: . : :. .: : .: .. .: :. :: :. . .
CCDS33 FKRLGLRKPGLPRGLWLAKPSARVPGTKASRGSGAEVTLIDFGEEPVVPALRPCAPSLAQ
540 550 560 570 580 590
120 130 140 150 160 170
pF1KB5 LTVNGVCA---STPPLTPIKNSPSLFPCAPLCERGSRPLPPLPISEALSLDDTDCEVEFL
:.... :. ::: .: . : . .:. . .::::: : . .. :. : :. .
CCDS33 LAMDA-CSLLDETPPQSPTRALPRPLHPTPVVDWDARPLPPPPAYDDVAQDEDDFEICSI
600 610 620 630 640 650
180 190 200 210 220 230
pF1KB5 TSSDTDFLLEDSTLSDFKYDVPGRRSFRGCGQINYAYFDT---PAVSAADLSYVSDQNGG
.::: ::. : :: :::. : : .. :.::
CCDS33 ----------NSTLVG--AGVPAGPS---QGQTNYAFVPEQARPPPPLEDNLFLPPQGGG
660 670 680 690
240 250 260 270 280
pF1KB5 VPDPNPPPPQTHRRLR----RSHSGPAGSFNKPAIRISNCCIHRASPNSDEDKPEVPPRV
: . . . :. :. ..:::: :: ::..: :::.:::::
CCDS33 KPPSSAQTAEIFQALQQECMRQLQAPAGS---PA--------PSPSPGGD-DKPQVPPRV
700 710 720 730 740
290 300 310 320 330
pF1KB5 PIPPRPVKPDYRRWSA---EVTSSTYSDEDRPPKVPPREPLSPSNSRTPSP------KSL
::::::..: . : : .: . ::.:::::::::..:::::: . :
CCDS33 PIPPRPTRPHVQLSPAPPGEEETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPL
750 760 770 780 790 800
340 350 360 370 380 390
pF1KB5 PSYLNG----VMPPTQSFAPDPKYVSSKALQRQNSEGSASKVPCILPIIENGKKVSSTHY
: :.. .:: ::::: ::::.. ...: . ... ::::::...:::::::::
CCDS33 PPRLSSSPGKTMPTTQSFASDPKYATPQVIQAPGPRAG----PCILPIVRDGKKVSSTHY
810 820 830 840 850
400 410 420 430 440 450
pF1KB5 YLLPERPPYLDKYEKFFREAEETNGGAQIQPLPADCGISSATEKPDSKTKMDLGGHVKRK
::::::: ::..:..:.:::. . . :::
CCDS33 YLLPERPSYLERYQRFLREAQSPE---EPTPLPVPLLLPPPSTPAPAAPTATVRPMPQAA
860 870 880 890 900 910
460
pF1KB5 HLSYVVSP
CCDS33 LDPKANFSTNNSNPGARPPPPRATARLPQRGCPGDGPEAGRPADKIQMAMVHGVTTEECQ
920 930 940 950 960 970
>>CCDS77875.1 TNK2 gene_id:10188|Hs108|chr3 (1040 aa)
initn: 669 init1: 222 opt: 481 Z-score: 323.6 bits: 70.3 E(32554): 1e-11
Smith-Waterman score: 665; 33.1% identity (56.1% similar) in 483 aa overlap (2-427:477-921)
10 20 30
pF1KB5 MSIAGVAAQEIRVPLKTGFLHNGRAMGNMRK
:.::..::.: ::...:.:.:.. .. :.
CCDS77 VIEGRAENYWWRGQNTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRH
450 460 470 480 490 500
40 50 60 70 80
pF1KB5 TYWSSRSEFKNNFLN--IDPITMAYSLNSSAQERLIPLGHASKSA---------PMNGHC
:. ... . .:. .:: . :.. :... :: ..: . :...
CCDS77 C-WGFPDRIDELYLGNPMDPPDL-LSVELSTSRPPQHLGGVKKPTYDPVSEDQDPLSSD-
510 520 530 540 550 560
90 100 110
pF1KB5 FAENG---PSQKSSL----PPLLIPPSE---------NLGPHEEDQVV-----CG--FKK
: . : :. .: : .: .. .: :. :: :. . .
CCDS77 FKRLGLRKPGLPRGLWLAKPSARVPGTKASRGSGAEVTLIDFGEEPVVPALRPCAPSLAQ
570 580 590 600 610 620
120 130 140 150 160 170
pF1KB5 LTVNGVCA---STPPLTPIKNSPSLFPCAPLCERGSRPLPPLPISEALSLDDTDCEVEFL
:.... :. ::: .: . : . .:. . .::::: : . .. :. : :. .
CCDS77 LAMDA-CSLLDETPPQSPTRALPRPLHPTPVVDWDARPLPPPPAYDDVAQDEDDFEICSI
630 640 650 660 670 680
180 190 200 210 220 230
pF1KB5 TSSDTDFLLEDSTLSDFKYDVPGRRSFRGCGQINYAYFDT---PAVSAADLSYVSDQNGG
.::: ::. : :: :::. : : .. :.::
CCDS77 ----------NSTLVG--AGVPAGPS---QGQTNYAFVPEQARPPPPLEDNLFLPPQGGG
690 700 710 720
240 250 260 270 280
pF1KB5 VPDPNPPPPQTHRRLR----RSHSGPAGSFNKPAIRISNCCIHRASPNSDEDKPEVPPRV
: . . . :. :. ..:::: :: ::..: :::.:::::
CCDS77 KPPSSAQTAEIFQALQQECMRQLQAPAGS---PA--------PSPSPGGD-DKPQVPPRV
730 740 750 760 770
290 300 310 320 330
pF1KB5 PIPPRPVKPDYRRWSA---EVTSSTYSDEDRPPKVPPREPLSPSNSRTPSP------KSL
::::::..: . : : .: . ::.:::::::::..:::::: . :
CCDS77 PIPPRPTRPHVQLSPAPPGEEETSQWPGPASPPRVPPREPLSPQGSRTPSPLVPPGSSPL
780 790 800 810 820 830
340 350 360 370 380 390
pF1KB5 PSYLNG----VMPPTQSFAPDPKYVSSKALQRQNSEGSASKVPCILPIIENGKKVSSTHY
: :.. .:: ::::: ::::.. ...: . ... ::::::...:::::::::
CCDS77 PPRLSSSPGKTMPTTQSFASDPKYATPQVIQAPGPRAG----PCILPIVRDGKKVSSTHY
840 850 860 870 880 890
400 410 420 430 440 450
pF1KB5 YLLPERPPYLDKYEKFFREAEETNGGAQIQPLPADCGISSATEKPDSKTKMDLGGHVKRK
::::::: ::..:..:.:::. . . :::
CCDS77 YLLPERPSYLERYQRFLREAQSPE---EPTPLPVPLLLPPPSTPAPAAPTATVRPMPQAA
900 910 920 930 940
460
pF1KB5 HLSYVVSP
CCDS77 LDPKANFSTNNSNPGARPPPPRATARLPQRGCPGDGPEAGRPADKIQMVEQLFGLGLRPR
950 960 970 980 990 1000
>>CCDS33927.1 TNK2 gene_id:10188|Hs108|chr3 (1086 aa)
initn: 669 init1: 222 opt: 481 Z-score: 323.4 bits: 70.3 E(32554): 1.1e-11
Smith-Waterman score: 636; 38.9% identity (57.9% similar) in 321 aa overlap (127-427:681-967)
100 110 120 130 140 150
pF1KB5 IPPSENLGPHEEDQVVCGFKKLTVNGVCASTPPLTPIKNSPSLFPCAPLCERGSRPLPPL
::: .: . : . .:. . .:::::
CCDS33 FGEEPVVPALRPCAPSLAQLAMDACSLLDETPPQSPTRALPRPLHPTPVVDWDARPLPPP
660 670 680 690 700 710
160 170 180 190 200 210
pF1KB5 PISEALSLDDTDCEVEFLTSSDTDFLLEDSTLSDFKYDVPGRRSFRGCGQINYAYFDT--
: . .. :. : :. . .::: ::. : :: :::.
CCDS33 PAYDDVAQDEDDFEICSI----------NSTL--VGAGVPAGPS---QGQTNYAFVPEQA
720 730 740 750
220 230 240 250 260
pF1KB5 -PAVSAADLSYVSDQNGGVPDPNPPPPQTHRRLR----RSHSGPAGSFNKPAIRISNCCI
: : .. :.:: : . . . :. :. ..:::: ::
CCDS33 RPPPPLEDNLFLPPQGGGKPPSSAQTAEIFQALQQECMRQLQAPAGS---PA--------
760 770 780 790 800
270 280 290 300 310 320
pF1KB5 HRASPNSDEDKPEVPPRVPIPPRPVKPDYRRWSA---EVTSSTYSDEDRPPKVPPREPLS
::..: :::.:::::::::::..: . : : .: . ::.::::::::
CCDS33 PSPSPGGD-DKPQVPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGPASPPRVPPREPLS
810 820 830 840 850 860
330 340 350 360 370
pF1KB5 PSNSRTPSP------KSLPSYLNG----VMPPTQSFAPDPKYVSSKALQRQNSEGSASKV
:..:::::: . :: :.. .:: ::::: ::::.. ...: . ...
CCDS33 PQGSRTPSPLVPPGSSPLPPRLSSSPGKTMPTTQSFASDPKYATPQVIQAPGPRAG----
870 880 890 900 910
380 390 400 410 420 430
pF1KB5 PCILPIIENGKKVSSTHYYLLPERPPYLDKYEKFFREAEETNGGAQIQPLPADCGISSAT
::::::...:::::::::::::::: ::..:..:.:::. . . :::
CCDS33 PCILPIVRDGKKVSSTHYYLLPERPSYLERYQRFLREAQSPE---EPTPLPVPLLLPPPS
920 930 940 950 960 970
440 450 460
pF1KB5 EKPDSKTKMDLGGHVKRKHLSYVVSP
CCDS33 TPAPAAPTATVRPMPQAALDPKANFSTNNSNPGARPPPPRATARLPQRGCPGDGPEAGRP
980 990 1000 1010 1020 1030
462 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:34:48 2016 done: Sat Nov 5 10:34:48 2016
Total Scan time: 2.450 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]