Result of FASTA (omim) for
pF1KB5775
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5775, 813 aa
1>>>pF1KB5775 813 - 813 aa - 813 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5669+/-0.00045; mu= 9.0491+/- 0.028
mean_var=154.0549+/-33.212, 0's: 0 Z-trim(115.1): 181 B-trim: 753 in 2/55
Lambda= 0.103332
statistics sampled from 25047 (25282) to 25047 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.296), width: 16
Scan time: 13.150
The best scores are: opt bits E(85289)
NP_776216 (OMIM: 604860,615468) mucosa-associated ( 813) 5508 834.1 0
NP_006776 (OMIM: 604860,615468) mucosa-associated ( 824) 3406 520.8 9.7e-147
XP_011524096 (OMIM: 604860,615468) PREDICTED: muco ( 427) 2110 327.4 8.4e-89
XP_016857436 (OMIM: 179590,616001) PREDICTED: rece (1618) 250 50.5 7e-05
XP_016857435 (OMIM: 179590,616001) PREDICTED: rece (1627) 250 50.5 7.1e-05
XP_006710864 (OMIM: 179590,616001) PREDICTED: rece (1729) 250 50.5 7.4e-05
XP_016857433 (OMIM: 179590,616001) PREDICTED: rece (1800) 250 50.5 7.7e-05
XP_006710863 (OMIM: 179590,616001) PREDICTED: rece (1811) 250 50.5 7.7e-05
XP_006710862 (OMIM: 179590,616001) PREDICTED: rece (1820) 250 50.5 7.7e-05
XP_006710861 (OMIM: 179590,616001) PREDICTED: rece (1902) 250 50.6 8e-05
XP_006710860 (OMIM: 179590,616001) PREDICTED: rece (1911) 250 50.6 8e-05
XP_016857431 (OMIM: 179590,616001) PREDICTED: rece (1912) 250 50.6 8e-05
XP_006710859 (OMIM: 179590,616001) PREDICTED: rece (1913) 250 50.6 8e-05
XP_011540174 (OMIM: 179590,616001) PREDICTED: rece (1922) 250 50.6 8.1e-05
XP_006710858 (OMIM: 179590,616001) PREDICTED: rece (1922) 250 50.6 8.1e-05
XP_011540175 (OMIM: 179590,616001) PREDICTED: rece (1922) 250 50.6 8.1e-05
XP_005271136 (OMIM: 179590,616001) PREDICTED: rece (1922) 250 50.6 8.1e-05
XP_011540173 (OMIM: 179590,616001) PREDICTED: rece (1922) 250 50.6 8.1e-05
NP_001316067 (OMIM: 179590,616001) receptor-type t (1637) 233 48.0 0.00041
XP_005258534 (OMIM: 607157) PREDICTED: sialic acid ( 455) 211 44.3 0.0015
NP_570925 (OMIM: 601576) receptor-type tyrosine-pr (1505) 219 45.9 0.0016
XP_016882565 (OMIM: 601576) PREDICTED: receptor-ty (1505) 219 45.9 0.0016
XP_016882564 (OMIM: 601576) PREDICTED: receptor-ty (1517) 219 45.9 0.0016
XP_016882563 (OMIM: 601576) PREDICTED: receptor-ty (1521) 219 45.9 0.0017
NP_001128635 (OMIM: 607157) sialic acid-binding Ig ( 602) 211 44.4 0.0018
NP_001164630 (OMIM: 606091) sialic acid-binding Ig ( 544) 210 44.2 0.0019
NP_001164629 (OMIM: 606091) sialic acid-binding Ig ( 554) 210 44.2 0.0019
XP_011508343 (OMIM: 603075,608548) PREDICTED: hemi (3132) 223 46.7 0.0019
XP_016882561 (OMIM: 601576) PREDICTED: receptor-ty (1910) 219 45.9 0.002
XP_016882560 (OMIM: 601576) PREDICTED: receptor-ty (1919) 219 45.9 0.002
XP_016882559 (OMIM: 601576) PREDICTED: receptor-ty (1923) 219 45.9 0.002
XP_016882558 (OMIM: 601576) PREDICTED: receptor-ty (1930) 219 45.9 0.002
XP_016882557 (OMIM: 601576) PREDICTED: receptor-ty (1935) 219 45.9 0.002
XP_016882555 (OMIM: 601576) PREDICTED: receptor-ty (1939) 219 45.9 0.002
XP_016882556 (OMIM: 601576) PREDICTED: receptor-ty (1939) 219 45.9 0.002
XP_016882554 (OMIM: 601576) PREDICTED: receptor-ty (1939) 219 45.9 0.002
XP_005258533 (OMIM: 607157) PREDICTED: sialic acid ( 682) 211 44.4 0.002
NP_001164628 (OMIM: 606091) sialic acid-binding Ig ( 602) 210 44.2 0.002
NP_443116 (OMIM: 607157) sialic acid-binding Ig-li ( 698) 211 44.4 0.0021
NP_001164627 (OMIM: 606091) sialic acid-binding Ig ( 639) 210 44.2 0.0021
XP_011525741 (OMIM: 606091) PREDICTED: sialic acid ( 649) 210 44.2 0.0022
NP_149121 (OMIM: 606091) sialic acid-binding Ig-li ( 697) 210 44.3 0.0023
XP_016857926 (OMIM: 603075,608548) PREDICTED: hemi (4976) 223 46.8 0.0028
NP_005520 (OMIM: 142461,224410,255800) basement me (4391) 222 46.6 0.0028
NP_001278789 (OMIM: 142461,224410,255800) basement (4392) 222 46.6 0.0028
XP_016856611 (OMIM: 142461,224410,255800) PREDICTE (4438) 222 46.6 0.0028
XP_016856610 (OMIM: 142461,224410,255800) PREDICTE (4439) 222 46.6 0.0028
XP_016856609 (OMIM: 142461,224410,255800) PREDICTE (4456) 222 46.6 0.0028
XP_011539620 (OMIM: 142461,224410,255800) PREDICTE (4574) 222 46.7 0.0029
XP_011508340 (OMIM: 603075,608548) PREDICTED: hemi (5518) 223 46.9 0.003
>>NP_776216 (OMIM: 604860,615468) mucosa-associated lymp (813 aa)
initn: 5508 init1: 5508 opt: 5508 Z-score: 4449.0 bits: 834.1 E(85289): 0
Smith-Waterman score: 5508; 100.0% identity (100.0% similar) in 813 aa overlap (1-813:1-813)
10 20 30 40 50 60
pF1KB5 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 SKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELTN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 LLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENFGNSFMVPVDAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 LLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENFGNSFMVPVDAP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 NPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 NPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 TCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCHLTKGKQALEIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 TCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCHLTKGKQALEIR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 SSLSEKRALTDPIQGTEYSAESLVRNLQWAKAHELPESMCLKFDCGVQIQLGFAAEFSNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 SSLSEKRALTDPIQGTEYSAESLVRNLQWAKAHELPESMCLKFDCGVQIQLGFAAEFSNV
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 MIIYTSIVYKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVSKDLPKHCLYTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 MIIYTSIVYKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVSKDLPKHCLYTR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 LSSLQKLKEHLVFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHRGLGRKTCFQTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 LSSLQKLKEHLVFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHRGLGRKTCFQTCL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB5 MSNGPYQSSAATSGGAGHYHSLQDPFHGVYHSHPGNPSNVTPADSCHCSRTPDAFISSFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_776 MSNGPYQSSAATSGGAGHYHSLQDPFHGVYHSHPGNPSNVTPADSCHCSRTPDAFISSFA
730 740 750 760 770 780
790 800 810
pF1KB5 HHASCHFSRSNVPVETTDEIPFSFSDRLRISEK
:::::::::::::::::::::::::::::::::
NP_776 HHASCHFSRSNVPVETTDEIPFSFSDRLRISEK
790 800 810
>>NP_006776 (OMIM: 604860,615468) mucosa-associated lymp (824 aa)
initn: 3403 init1: 3403 opt: 3406 Z-score: 2755.4 bits: 520.8 E(85289): 9.7e-147
Smith-Waterman score: 5476; 98.7% identity (98.7% similar) in 824 aa overlap (1-813:1-824)
10 20 30 40 50 60
pF1KB5 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
250 260 270 280 290 300
310 320 330 340
pF1KB5 SKKVEIII-----------DELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLK
:::::::: :::::::::::::::::::::::::::::::::::::::::
NP_006 SKKVEIIIGRTDEAVECTEDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLK
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB5 APLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 APLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENF
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB5 GNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDAL
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB5 KVTANIVFGYATCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KVTANIVFGYATCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCH
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB5 LTKGKQALEIRSSLSEKRALTDPIQGTEYSAESLVRNLQWAKAHELPESMCLKFDCGVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LTKGKQALEIRSSLSEKRALTDPIQGTEYSAESLVRNLQWAKAHELPESMCLKFDCGVQI
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB5 QLGFAAEFSNVMIIYTSIVYKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QLGFAAEFSNVMIIYTSIVYKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVS
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB5 KDLPKHCLYTRLSSLQKLKEHLVFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KDLPKHCLYTRLSSLQKLKEHLVFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHRG
670 680 690 700 710 720
710 720 730 740 750 760
pF1KB5 LGRKTCFQTCLMSNGPYQSSAATSGGAGHYHSLQDPFHGVYHSHPGNPSNVTPADSCHCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LGRKTCFQTCLMSNGPYQSSAATSGGAGHYHSLQDPFHGVYHSHPGNPSNVTPADSCHCS
730 740 750 760 770 780
770 780 790 800 810
pF1KB5 RTPDAFISSFAHHASCHFSRSNVPVETTDEIPFSFSDRLRISEK
::::::::::::::::::::::::::::::::::::::::::::
NP_006 RTPDAFISSFAHHASCHFSRSNVPVETTDEIPFSFSDRLRISEK
790 800 810 820
>>XP_011524096 (OMIM: 604860,615468) PREDICTED: mucosa-a (427 aa)
initn: 2688 init1: 2109 opt: 2110 Z-score: 1715.2 bits: 327.4 E(85289): 8.4e-89
Smith-Waterman score: 2666; 96.8% identity (97.1% similar) in 412 aa overlap (1-401:1-412)
10 20 30 40 50 60
pF1KB5 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
250 260 270 280 290 300
310 320 330 340
pF1KB5 SKKVEIII-----------DELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLK
:::::::: :::::::::::::::::::::::::::::::::::::::::
XP_011 SKKVEIIIGRTDEAVECTEDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLK
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB5 APLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENF
:::::::::::::::::::::::::::::::::::::::::::::::: :.:
XP_011 APLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGWLHYILKYCEYS
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB5 GNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDAL
XP_011 KHQTHLH
>>XP_016857436 (OMIM: 179590,616001) PREDICTED: receptor (1618 aa)
initn: 160 init1: 129 opt: 250 Z-score: 208.6 bits: 50.5 E(85289): 7e-05
Smith-Waterman score: 250; 29.8% identity (59.7% similar) in 181 aa overlap (101-270:107-279)
80 90 100 110 120
pF1KB5 CLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQLLS-PPGI-K
::.:. ... . ::. . :::. .
XP_016 RFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSAKLSVLEEEQLPPGFPS
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB5 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK----MNKEIPNGNTSELIFNAVHVK-
: ..:. :.: .. . . : : :.: . .::: .. :: ..: .:....
XP_016 IDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIES
140 150 160 170 180 190
190 200 210 220 230
pF1KB5 ----DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLM
: : : : ..:. ..: ..: : : :: : :. .. . :.::..:
XP_016 SEESDQGKYECVATNSAGTRYSAPANLYVRD-----QREVRRVAP---RFSIPPSSQEVM
200 210 220 230 240
240 250 260 270 280 290
pF1KB5 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQ
::... : :::::.:.:. .:. . ::.:
XP_016 PGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 DSKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELT
XP_016 GMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQ
310 320 330 340 350 360
>>XP_016857435 (OMIM: 179590,616001) PREDICTED: receptor (1627 aa)
initn: 160 init1: 129 opt: 250 Z-score: 208.5 bits: 50.5 E(85289): 7.1e-05
Smith-Waterman score: 250; 29.8% identity (59.7% similar) in 181 aa overlap (101-270:107-279)
80 90 100 110 120
pF1KB5 CLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQLLS-PPGI-K
::.:. ... . ::. . :::. .
XP_016 RFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSAKLSVLEEEQLPPGFPS
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB5 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK----MNKEIPNGNTSELIFNAVHVK-
: ..:. :.: .. . . : : :.: . .::: .. :: ..: .:....
XP_016 IDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIES
140 150 160 170 180 190
190 200 210 220 230
pF1KB5 ----DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLM
: : : : ..:. ..: ..: : : :: : :. .. . :.::..:
XP_016 SEESDQGKYECVATNSAGTRYSAPANLYVRD-----QREVRRVAP---RFSIPPSSQEVM
200 210 220 230 240
240 250 260 270 280 290
pF1KB5 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQ
::... : :::::.:.:. .:. . ::.:
XP_016 PGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 DSKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELT
XP_016 GMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQ
310 320 330 340 350 360
>>XP_006710864 (OMIM: 179590,616001) PREDICTED: receptor (1729 aa)
initn: 160 init1: 129 opt: 250 Z-score: 208.2 bits: 50.5 E(85289): 7.4e-05
Smith-Waterman score: 250; 29.8% identity (59.7% similar) in 181 aa overlap (101-270:107-279)
80 90 100 110 120
pF1KB5 CLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQLLS-PPGI-K
::.:. ... . ::. . :::. .
XP_006 RFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSAKLSVLEEEQLPPGFPS
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB5 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK----MNKEIPNGNTSELIFNAVHVK-
: ..:. :.: .. . . : : :.: . .::: .. :: ..: .:....
XP_006 IDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIES
140 150 160 170 180 190
190 200 210 220 230
pF1KB5 ----DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLM
: : : : ..:. ..: ..: : : :: : :. .. . :.::..:
XP_006 SEESDQGKYECVATNSAGTRYSAPANLYVRD-----QREVRRVAP---RFSIPPSSQEVM
200 210 220 230 240
240 250 260 270 280 290
pF1KB5 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQ
::... : :::::.:.:. .:. . ::.:
XP_006 PGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 DSKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELT
XP_006 GMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQ
310 320 330 340 350 360
>>XP_016857433 (OMIM: 179590,616001) PREDICTED: receptor (1800 aa)
initn: 160 init1: 129 opt: 250 Z-score: 207.9 bits: 50.5 E(85289): 7.7e-05
Smith-Waterman score: 250; 29.8% identity (59.7% similar) in 181 aa overlap (101-270:107-279)
80 90 100 110 120
pF1KB5 CLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQLLS-PPGI-K
::.:. ... . ::. . :::. .
XP_016 RFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSAKLSVLEEEQLPPGFPS
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB5 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK----MNKEIPNGNTSELIFNAVHVK-
: ..:. :.: .. . . : : :.: . .::: .. :: ..: .:....
XP_016 IDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIES
140 150 160 170 180 190
190 200 210 220 230
pF1KB5 ----DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLM
: : : : ..:. ..: ..: : : :: : :. .. . :.::..:
XP_016 SEESDQGKYECVATNSAGTRYSAPANLYVRD-----QREVRRVAP---RFSIPPSSQEVM
200 210 220 230 240
240 250 260 270 280 290
pF1KB5 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQ
::... : :::::.:.:. .:. . ::.:
XP_016 PGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 DSKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELT
XP_016 GMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQ
310 320 330 340 350 360
>>XP_006710863 (OMIM: 179590,616001) PREDICTED: receptor (1811 aa)
initn: 160 init1: 129 opt: 250 Z-score: 207.9 bits: 50.5 E(85289): 7.7e-05
Smith-Waterman score: 250; 29.8% identity (59.7% similar) in 181 aa overlap (101-270:107-279)
80 90 100 110 120
pF1KB5 CLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQLLS-PPGI-K
::.:. ... . ::. . :::. .
XP_006 RFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSAKLSVLEEEQLPPGFPS
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB5 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK----MNKEIPNGNTSELIFNAVHVK-
: ..:. :.: .. . . : : :.: . .::: .. :: ..: .:....
XP_006 IDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIES
140 150 160 170 180 190
190 200 210 220 230
pF1KB5 ----DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLM
: : : : ..:. ..: ..: : : :: : :. .. . :.::..:
XP_006 SEESDQGKYECVATNSAGTRYSAPANLYVRD-----QREVRRVAP---RFSIPPSSQEVM
200 210 220 230 240
240 250 260 270 280 290
pF1KB5 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQ
::... : :::::.:.:. .:. . ::.:
XP_006 PGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 DSKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELT
XP_006 GMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQ
310 320 330 340 350 360
>>XP_006710862 (OMIM: 179590,616001) PREDICTED: receptor (1820 aa)
initn: 160 init1: 129 opt: 250 Z-score: 207.8 bits: 50.5 E(85289): 7.7e-05
Smith-Waterman score: 250; 29.8% identity (59.7% similar) in 181 aa overlap (101-270:107-279)
80 90 100 110 120
pF1KB5 CLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQLLS-PPGI-K
::.:. ... . ::. . :::. .
XP_006 RFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSAKLSVLEEEQLPPGFPS
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB5 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK----MNKEIPNGNTSELIFNAVHVK-
: ..:. :.: .. . . : : :.: . .::: .. :: ..: .:....
XP_006 IDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIES
140 150 160 170 180 190
190 200 210 220 230
pF1KB5 ----DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLM
: : : : ..:. ..: ..: : : :: : :. .. . :.::..:
XP_006 SEESDQGKYECVATNSAGTRYSAPANLYVRD-----QREVRRVAP---RFSIPPSSQEVM
200 210 220 230 240
240 250 260 270 280 290
pF1KB5 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQ
::... : :::::.:.:. .:. . ::.:
XP_006 PGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 DSKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELT
XP_006 GMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQ
310 320 330 340 350 360
>>XP_006710861 (OMIM: 179590,616001) PREDICTED: receptor (1902 aa)
initn: 129 init1: 129 opt: 250 Z-score: 207.6 bits: 50.6 E(85289): 8e-05
Smith-Waterman score: 250; 29.8% identity (59.7% similar) in 181 aa overlap (101-270:107-279)
80 90 100 110 120
pF1KB5 CLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQLLS-PPGI-K
::.:. ... . ::. . :::. .
XP_006 RFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSAKLSVLEEEQLPPGFPS
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB5 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFK----MNKEIPNGNTSELIFNAVHVK-
: ..:. :.: .. . . : : :.: . .::: .. :: ..: .:....
XP_006 IDMGPQLKVVEKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIES
140 150 160 170 180 190
190 200 210 220 230
pF1KB5 ----DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLM
: : : : ..:. ..: ..: : : :: : :. .. . :.::..:
XP_006 SEESDQGKYECVATNSAGTRYSAPANLYVRD-----QREVRRVAP---RFSIPPSSQEVM
200 210 220 230 240
240 250 260 270 280 290
pF1KB5 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQ
::... : :::::.:.:. .:. . ::.:
XP_006 PGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVVRSANYTCVAISSL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 DSKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELT
XP_006 GMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQ
310 320 330 340 350 360
813 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:38:56 2016 done: Sat Nov 5 07:38:58 2016
Total Scan time: 13.150 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]