Result of FASTA (ccds) for
pF1KB5775
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5775, 813 aa
1>>>pF1KB5775 813 - 813 aa - 813 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1024+/-0.000966; mu= 11.7459+/- 0.058
mean_var=121.1844+/-24.788, 0's: 0 Z-trim(108.0): 92 B-trim: 2 in 1/54
Lambda= 0.116507
statistics sampled from 9837 (9930) to 9837 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.305), width: 16
Scan time: 4.090
The best scores are: opt bits E(32554)
CCDS11968.1 MALT1 gene_id:10892|Hs108|chr18 ( 813) 5508 937.7 0
CCDS11967.1 MALT1 gene_id:10892|Hs108|chr18 ( 824) 3406 584.4 2.6e-166
>>CCDS11968.1 MALT1 gene_id:10892|Hs108|chr18 (813 aa)
initn: 5508 init1: 5508 opt: 5508 Z-score: 5008.8 bits: 937.7 E(32554): 0
Smith-Waterman score: 5508; 100.0% identity (100.0% similar) in 813 aa overlap (1-813:1-813)
10 20 30 40 50 60
pF1KB5 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SKKVEIIIDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLKAPLVDVYELTN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 LLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENFGNSFMVPVDAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENFGNSFMVPVDAP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 NPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 NPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 TCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCHLTKGKQALEIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCHLTKGKQALEIR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 SSLSEKRALTDPIQGTEYSAESLVRNLQWAKAHELPESMCLKFDCGVQIQLGFAAEFSNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SSLSEKRALTDPIQGTEYSAESLVRNLQWAKAHELPESMCLKFDCGVQIQLGFAAEFSNV
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 MIIYTSIVYKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVSKDLPKHCLYTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MIIYTSIVYKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVSKDLPKHCLYTR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 LSSLQKLKEHLVFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHRGLGRKTCFQTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LSSLQKLKEHLVFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHRGLGRKTCFQTCL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB5 MSNGPYQSSAATSGGAGHYHSLQDPFHGVYHSHPGNPSNVTPADSCHCSRTPDAFISSFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSNGPYQSSAATSGGAGHYHSLQDPFHGVYHSHPGNPSNVTPADSCHCSRTPDAFISSFA
730 740 750 760 770 780
790 800 810
pF1KB5 HHASCHFSRSNVPVETTDEIPFSFSDRLRISEK
:::::::::::::::::::::::::::::::::
CCDS11 HHASCHFSRSNVPVETTDEIPFSFSDRLRISEK
790 800 810
>>CCDS11967.1 MALT1 gene_id:10892|Hs108|chr18 (824 aa)
initn: 3403 init1: 3403 opt: 3406 Z-score: 3099.3 bits: 584.4 E(32554): 2.6e-166
Smith-Waterman score: 5476; 98.7% identity (98.7% similar) in 824 aa overlap (1-813:1-824)
10 20 30 40 50 60
pF1KB5 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSLLGDPLQALPPSAAPTGPLLAPPAGATLNRLREPLLRRLSELLDQAPEGRGWRRLAEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AGSRGRLRLSCLDLEQCSLKVLEPEGSPSLCLLKLMGEKGCTVTELSDFLQAMEHTEVLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LLSPPGIKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD
250 260 270 280 290 300
310 320 330 340
pF1KB5 SKKVEIII-----------DELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLK
:::::::: :::::::::::::::::::::::::::::::::::::::::
CCDS11 SKKVEIIIGRTDEAVECTEDELNNLGHPDNKEQTTDQPLAKDKVALLIGNMNYREHPKLK
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB5 APLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 APLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENF
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB5 GNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGLNVFLLDMCRKRNDYDDTIPILDAL
430 440 450 460 470 480
470 480 490 500 510 520
pF1KB5 KVTANIVFGYATCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KVTANIVFGYATCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCH
490 500 510 520 530 540
530 540 550 560 570 580
pF1KB5 LTKGKQALEIRSSLSEKRALTDPIQGTEYSAESLVRNLQWAKAHELPESMCLKFDCGVQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LTKGKQALEIRSSLSEKRALTDPIQGTEYSAESLVRNLQWAKAHELPESMCLKFDCGVQI
550 560 570 580 590 600
590 600 610 620 630 640
pF1KB5 QLGFAAEFSNVMIIYTSIVYKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QLGFAAEFSNVMIIYTSIVYKPPEIIMCDAYVTDFPLDLDIDPKDANKGTPEETGSYLVS
610 620 630 640 650 660
650 660 670 680 690 700
pF1KB5 KDLPKHCLYTRLSSLQKLKEHLVFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KDLPKHCLYTRLSSLQKLKEHLVFTVCLSYQYSGLEDTVEDKQEVNVGKPLIAKLDMHRG
670 680 690 700 710 720
710 720 730 740 750 760
pF1KB5 LGRKTCFQTCLMSNGPYQSSAATSGGAGHYHSLQDPFHGVYHSHPGNPSNVTPADSCHCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LGRKTCFQTCLMSNGPYQSSAATSGGAGHYHSLQDPFHGVYHSHPGNPSNVTPADSCHCS
730 740 750 760 770 780
770 780 790 800 810
pF1KB5 RTPDAFISSFAHHASCHFSRSNVPVETTDEIPFSFSDRLRISEK
::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RTPDAFISSFAHHASCHFSRSNVPVETTDEIPFSFSDRLRISEK
790 800 810 820
813 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:38:55 2016 done: Sat Nov 5 07:38:56 2016
Total Scan time: 4.090 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]