Result of FASTA (ccds) for
pF1KB5682
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5682, 552 aa
1>>>pF1KB5682 552 - 552 aa - 552 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1059+/-0.000901; mu= 6.8919+/- 0.054
mean_var=180.9090+/-36.388, 0's: 0 Z-trim(111.9): 20 B-trim: 0 in 0/53
Lambda= 0.095355
statistics sampled from 12729 (12744) to 12729 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.391), width: 16
Scan time: 3.770
The best scores are: opt bits E(32554)
CCDS11950.1 SMAD4 gene_id:4089|Hs108|chr18 ( 552) 3833 539.7 3.4e-153
CCDS9360.1 SMAD9 gene_id:4093|Hs108|chr13 ( 430) 493 80.2 5.7e-15
CCDS45032.1 SMAD9 gene_id:4093|Hs108|chr13 ( 467) 493 80.2 6.1e-15
CCDS75308.1 SMAD5 gene_id:4090|Hs108|chr5 ( 465) 485 79.1 1.3e-14
CCDS10222.1 SMAD3 gene_id:4088|Hs108|chr15 ( 425) 472 77.3 4.2e-14
CCDS3765.1 SMAD1 gene_id:4086|Hs108|chr4 ( 465) 471 77.2 5e-14
>>CCDS11950.1 SMAD4 gene_id:4089|Hs108|chr18 (552 aa)
initn: 3833 init1: 3833 opt: 3833 Z-score: 2863.9 bits: 539.7 E(32554): 3.4e-153
Smith-Waterman score: 3833; 100.0% identity (100.0% similar) in 552 aa overlap (1-552:1-552)
10 20 30 40 50 60
pF1KB5 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGHSIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGHSIQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEGLLQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEGLLQI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 YWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 RFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 APGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 APGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 AISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVL
490 500 510 520 530 540
550
pF1KB5 HTMPIADPQPLD
::::::::::::
CCDS11 HTMPIADPQPLD
550
>>CCDS9360.1 SMAD9 gene_id:4093|Hs108|chr13 (430 aa)
initn: 860 init1: 231 opt: 493 Z-score: 382.2 bits: 80.2 E(32554): 5.7e-15
Smith-Waterman score: 887; 35.4% identity (55.2% similar) in 542 aa overlap (7-543:3-419)
10 20 30 40 50
pF1KB5 MDNMSITNTPTSNDACLS--IVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLI
..:: :. .. :. :. .:: : : .:..:..:::::::.:: .: :
CCDS93 MHSTTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELE
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 TAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQY
:.. : .::::::: :.:::::::. :::.::::: :.::::::... ::: .. :..
CCDS93 RALSCPG-QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 AFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGH
: : ::.:::::.:: .: .
CCDS93 PFGSKQKEVCINPYHYRRVETPVL------------------------------------
120 130
180 190 200 210 220 230
pF1KB5 SIQTIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEGL
:: .:.: .:. . :.. . . . ::. ::: :
CCDS93 -------PP-------------VLVPRHSEYN-----PQLSLLAKFRSASL----HSEPL
140 150 160 170
240 250 260 270 280 290
pF1KB5 L-QIASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPP
. . :. :. :: . :. : : . :.: :..:. : . .. ::
CCDS93 MPHNATYPDSFQQPPCSALPPSPSHAFSQSPCTASY--PHSPGSPSEPESPYQH------
180 190 200 210 220
300 310 320 330 340 350
pF1KB5 HPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDP
. . :: : :..:::.::.:.. .:::::.. : : .::..::
CCDS93 --SDFRPVCYE-----------EPQHWCSVAYYELNNRVGETFQASSRS--VLIDGFTDP
230 240 250 260
360 370 380 390 400 410
pF1KB5 SGG-DRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLD
:.. .::::: ::::.:. .:: .: ::::::.: : :.:...:.:: ..:::: .
CCDS93 SNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVG-GEVYAECVSDSSIFVQSRNCN
270 280 290 300 310 320
420 430 440 450 460 470
pF1KB5 REAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSV
. : :. .: :: . .:::. .: : : .. .. :
CCDS93 YQHGFHPA-TVCKIPSGCSLKVFN--------NQLFAQLLAQSVHHGFEV----------
330 340 350 360
480 490 500 510 520 530
pF1KB5 GGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQL
: .: ..: .::::::::: .: ::.. :::::::::: ::
CCDS93 ----------------VYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQW
370 380 390 400 410
540 550
pF1KB5 LDEVLHTMPIADPQPLD
::.:: :
CCDS93 LDKVLTQMGSPHNPISSVS
420 430
>>CCDS45032.1 SMAD9 gene_id:4093|Hs108|chr13 (467 aa)
initn: 741 init1: 231 opt: 493 Z-score: 381.7 bits: 80.2 E(32554): 6.1e-15
Smith-Waterman score: 947; 36.4% identity (57.8% similar) in 550 aa overlap (7-543:3-456)
10 20 30 40 50
pF1KB5 MDNMSITNTPTSNDACLS--IVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLI
..:: :. .. :. :. .:: : : .:..:..:::::::.:: .: :
CCDS45 MHSTTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGAMDELE
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 TAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQY
:.. : .::::::: :.:::::::. :::.::::: :.::::::... ::: .. :..
CCDS45 RALSCPG-QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 AFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGH
: : ::.:::::.:: .: . : .. . ... : :: .. .
CCDS45 PFGSKQKEVCINPYHYRRVETPVL-----------PPVLVPRHS---EYNPQLSLLAKFR
120 130 140 150 160
180 190 200 210 220
pF1KB5 SIQTIQHP--PSNRASTETYSTP--ALLAPSESNATS----TANFPNIPVASTSQPASIL
: . ..: : : . .... : . : :: :.: : ::..:. : .: :.: :
CCDS45 SASLHSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQSPCTASYPHSP-GSPSEPESPY
170 180 190 200 210 220
230 240 250 260 270 280
pF1KB5 GGSHSEGLLQIASGPQPGQQQNGFTGQPATYHHN-STTTWTGSRTAPYTPNLPHHQNGHL
.:: . . : : :: . .. : .:. : ..
CCDS45 --QHS-----VDTPPLP-------------YHATEASETQSGQ---PV--------DATA
230 240
290 300 310 320 330 340
pF1KB5 QHHPPMPPHPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIV
..: . : . :: : :..:::.::.:.. .:::::.. : :
CCDS45 DRHVVLSIPNGDFRPVCYE-----------EPQHWCSVAYYELNNRVGETFQASSRS--V
250 260 270 280 290
350 360 370 380 390 400
pF1KB5 TVDGYVDPSGG-DRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAV
.::..:::.. .::::: ::::.:. .:: .: ::::::.: : :.:...:.:: ..
CCDS45 LIDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVG-GEVYAECVSDSSI
300 310 320 330 340 350
410 420 430 440 450 460
pF1KB5 FVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAG
:::: . . : :. .: :: . .:::. .: : : .. .. :
CCDS45 FVQSRNCNYQHGFHPA-TVCKIPSGCSLKVFN--------NQLFAQLLAQSVHHGFEV--
360 370 380 390 400
470 480 490 500 510 520
pF1KB5 NIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEI
: .: ..: .::::::::: .: ::.. :::::::
CCDS45 ------------------------VYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEI
410 420 430 440
530 540 550
pF1KB5 HLHRALQLLDEVLHTMPIADPQPLD
::: :: ::.:: :
CCDS45 HLHGPLQWLDKVLTQMGSPHNPISSVS
450 460
>>CCDS75308.1 SMAD5 gene_id:4090|Hs108|chr5 (465 aa)
initn: 701 init1: 232 opt: 485 Z-score: 375.8 bits: 79.1 E(32554): 1.3e-14
Smith-Waterman score: 937; 36.9% identity (56.5% similar) in 531 aa overlap (20-543:15-454)
10 20 30 40 50 60
pF1KB5 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITA
:. :. .:: : : .:..:...::::::.:: .. : :
CCDS75 MTSMASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKA
10 20 30 40 50
70 80 90 100 110
pF1KB5 ITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQYAF
... : .::::::: :.:::::::. :::.::::: :.::::::... ::: . :.. :
CCDS75 LSSPG-QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 DLKCDSVCVNPYHYERVVSPGID--LSGLTLQSNAPSSMMVK-DEYVHDFEGQPSLSTEG
: ::.:::::.:: :: . : . : :..:. . :. .:. .:
CCDS75 GSKQKEVCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 HSIQTIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEG
:. : :.: :: :.:. . .: : ::.. : :
CCDS75 DSF----HQPNN--------TPFPLSPN-------SPYPPSP-ASSTYPNS---------
180 190 200
240 250 260 270 280 290
pF1KB5 LLQIASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPP
.::: : . : :: : : : : :. .. ::
CCDS75 --PASSGPGSPFQLPADTPPPA-----------------YMP--PDDQMGQ-DNSQPMDT
210 220 230 240
300 310 320 330 340 350
pF1KB5 HPGHYWPVHNELAFQP--PISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYV
. . .. . :.. . :..::::.:.:.. .:::.:.. :. : :::..
CCDS75 SNNMIPQIMPSISSRDVQPVA-YEEPKHWCSIVYYELNNRVGEAFHASSTS--VLVDGFT
250 260 270 280 290 300
360 370 380 390 400 410
pF1KB5 DPSGG-DRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYY
:::.. .::::: ::::.:. .:: .: ::::::.: : :.:...:::: ..::::
CCDS75 DPSNNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVG-GEVYAECLSDSSIFVQSRN
310 320 330 340 350
420 430 440 450 460 470
pF1KB5 LDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPG
. . : : .: :: : .:.:. : :. :... :
CCDS75 CNFHHGFHP-TTVCKIPSSCSLKIFN-NQEFAQLLAQSVNHGFEA---------------
360 370 380 390 400
480 490 500 510 520 530
pF1KB5 SVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRAL
: .: ..: .::::::::: .: ::.. :::::::::: :
CCDS75 ------------------VYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPL
410 420 430 440
540 550
pF1KB5 QLLDEVLHTMPIADPQPLD
: ::.:: :
CCDS75 QWLDKVLTQMGSPLNPISSVS
450 460
>>CCDS10222.1 SMAD3 gene_id:4088|Hs108|chr15 (425 aa)
initn: 766 init1: 229 opt: 472 Z-score: 366.6 bits: 77.3 E(32554): 4.2e-14
Smith-Waterman score: 938; 37.7% identity (58.1% similar) in 530 aa overlap (19-543:11-414)
10 20 30 40 50
pF1KB5 MDNMSITNTPTSNDACLSIVHSLMCHRQG---GESETFAKRAIESLVKKLKEKKDELDSL
::. :. ..: :. : . ..:..::::::: : .:: :
CCDS10 MSSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLK-KTGQLDEL
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 ITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQ
::::.... .::.:: :.:::::::. :::.::::: :::::::::.. ::. .. :.
CCDS10 EKAITTQNVN-TKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELRAMELCE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 YAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEG
.::..: : ::::::::.:: .: . . ... :. .: : :. .
CCDS10 FAFNMKKDEVCVNPYHYQRVETPVLPPVLVPRHTEIPA----------EF---PPLDDYS
120 130 140 150
180 190 200 210 220 230
pF1KB5 HSIQTIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEG
::: : : .::: . .: :
CCDS10 HSI------PEN-----------------------TNFP-----AGIEPQS---------
160 170
240 250 260 270 280 290
pF1KB5 LLQIASGPQPGQ-QQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMP
.: : :: ...: :.. :. . . .:: :::
CCDS10 --NIPETPPPGYLSEDGETSD----HQMNHSMDAGS------PNLS--------------
180 190 200
300 310 320 330 340 350
pF1KB5 PHPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVD
:.: :.::.: .:: .:: .::::.:.:.. .:::::. .: : .::::..:
CCDS10 PNPMS--PAHNNLDLQPVTYCEPA--FWCSISYYELNQRVGETFH--ASQPSMTVDGFTD
210 220 230 240 250 260
360 370 380 390 400 410
pF1KB5 PSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLD
::...::::: ::::.:. :.: .: :::.::.: : :.:...:::: :.:::: .
CCDS10 PSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCN
270 280 290 300 310 320
420 430 440 450 460 470
pF1KB5 REAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSV
.. : :. .: :: :. .:.:. .:. :. : .. :
CCDS10 QRYGWHPA-TVCKIPPGCNLKIFN--------NQEFAALLAQSVNQ--------------
330 340 350
480 490 500 510 520 530
pF1KB5 GGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQL
:. .: .: :.: .::::::::: .: ::.. ::::::.::. ::
CCDS10 -GFE-----------AVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQW
360 370 380 390 400
540 550
pF1KB5 LDEVLHTMPIADPQPLD
::.:: :
CCDS10 LDKVLTQMGSPSIRCSSVS
410 420
>>CCDS3765.1 SMAD1 gene_id:4086|Hs108|chr4 (465 aa)
initn: 696 init1: 225 opt: 471 Z-score: 365.4 bits: 77.2 E(32554): 5e-14
Smith-Waterman score: 938; 36.3% identity (58.0% similar) in 529 aa overlap (20-543:14-454)
10 20 30 40 50 60
pF1KB5 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITA
:. :. .:: : : .:..:...::::::.:: .. : :
CCDS37 MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKA
10 20 30 40 50
70 80 90 100 110
pF1KB5 ITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKN-ELKHVKYCQYAF
.. : .::.:::: :.:::::::. :::.::::: :.::::::... ::: .. :.. :
CCDS37 LSCPG-QPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 DLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGHSI
: ::.:::::.:: :: . : .. . ... : :: .. ...
CCDS37 GSKQKEVCINPYHYKRVESPVL-----------PPVLVPRHS---EYNPQHSLLAQFRNL
120 130 140 150
180 190 200 210 220 230
pF1KB5 -QTIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEGLL
:. : : : . .... : .. ::. : ..: : : :: :
CCDS37 GQNEPHMPLNATFPDSFQQP-----------NSHPFPHSP--NSSYPNS--PGSSSSTYP
160 170 180 190 200
240 250 260 270 280 290
pF1KB5 QIASGPQPGQ--QQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPP
. .. .::. :. . : :: .. : ::. :. :. ::.:
CCDS37 HSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQ--PMDTNM---------MAPPLPS
210 220 230 240 250
300 310 320 330 340 350
pF1KB5 HPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDP
. :. : . :..::::.:.:.. .:::.:.. :. : :::..::
CCDS37 EI-------NRGDVQA--VAYEEPKHWCSIVYYELNNRVGEAFHASSTS--VLVDGFTDP
260 270 280 290 300
360 370 380 390 400 410
pF1KB5 SGG-DRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLD
:.. .::::: ::::.:. .:: .: ::::::.: : :.:...:::: ..:::: .
CCDS37 SNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVG-GEVYAECLSDSSIFVQSRNCN
310 320 330 340 350 360
420 430 440 450 460 470
pF1KB5 REAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSV
. : : .: :: . .:.:. : :. :...
CCDS37 YHHGFHP-TTVCKIPSGCSLKIFN-NQEFAQLLAQSVNH---------------------
370 380 390
480 490 500 510 520 530
pF1KB5 GGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQL
:. : .: ..: .::::::::: .: ::.. :::::::::: ::
CCDS37 -GFET-----------VYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQW
400 410 420 430 440
540 550
pF1KB5 LDEVLHTMPIADPQPLD
::.:: :
CCDS37 LDKVLTQMGSPHNPISSVS
450 460
552 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 17:59:39 2016 done: Thu Nov 3 17:59:39 2016
Total Scan time: 3.770 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]