Result of FASTA (omim) for
pF1KB5677
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5677, 337 aa
1>>>pF1KB5677 337 - 337 aa - 337 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8130+/-0.000362; mu= 14.4139+/- 0.022
mean_var=82.9517+/-16.990, 0's: 0 Z-trim(116.1): 116 B-trim: 749 in 1/51
Lambda= 0.140819
statistics sampled from 26859 (26977) to 26859 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.316), width: 16
Scan time: 6.900
The best scores are: opt bits E(85289)
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337) 2275 471.7 1e-132
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B ( 337) 2275 471.7 1e-132
NP_001304029 (OMIM: 611327) dnaJ homolog subfamily ( 297) 1810 377.2 2.5e-104
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B ( 340) 1565 327.4 2.7e-89
NP_001304031 (OMIM: 611327) dnaJ homolog subfamily ( 222) 1481 310.3 2.6e-84
NP_001304030 (OMIM: 611327) dnaJ homolog subfamily ( 222) 1481 310.3 2.6e-84
NP_001287843 (OMIM: 604572) dnaJ homolog subfamily ( 240) 1077 228.2 1.4e-59
NP_001300893 (OMIM: 604572) dnaJ homolog subfamily ( 240) 1077 228.2 1.4e-59
XP_006722797 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 1077 228.2 1.4e-59
XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 1077 228.2 1.4e-59
XP_011526258 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 1077 228.2 1.4e-59
XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 981 208.8 1.4e-53
XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 981 208.8 1.4e-53
NP_036398 (OMIM: 611328) dnaJ homolog subfamily B ( 348) 981 208.8 1.4e-53
NP_001128477 (OMIM: 611328) dnaJ homolog subfamily ( 420) 981 208.8 1.6e-53
XP_011516144 (OMIM: 611328) PREDICTED: dnaJ homolo ( 420) 981 208.8 1.6e-53
NP_001128476 (OMIM: 611328) dnaJ homolog subfamily ( 462) 981 208.9 1.8e-53
XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ ( 350) 663 144.2 4e-34
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316) 654 142.3 1.3e-33
XP_016873166 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 648 141.1 2.5e-33
XP_011543309 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 648 141.1 2.5e-33
XP_016873165 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 648 141.1 2.5e-33
XP_016873164 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 648 141.1 2.5e-33
XP_011543311 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 648 141.1 2.5e-33
XP_016873167 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 648 141.1 2.5e-33
XP_005274041 (OMIM: 610263,617091) PREDICTED: dnaJ ( 262) 627 136.8 5e-32
XP_011543307 (OMIM: 610263,617091) PREDICTED: dnaJ ( 296) 627 136.8 5.5e-32
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A ( 397) 623 136.1 1.2e-31
XP_011543317 (OMIM: 610263,617091) PREDICTED: dnaJ ( 175) 507 112.3 7.8e-25
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily ( 77) 478 106.2 2.4e-23
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211) 420 94.7 1.9e-19
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241) 413 93.3 5.7e-19
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257) 413 93.3 6e-19
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326) 413 93.4 7.3e-19
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 413 93.4 7.4e-19
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 413 93.4 7.4e-19
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 413 93.4 7.4e-19
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277) 376 85.8 1.2e-16
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324) 376 85.9 1.3e-16
NP_001300968 (OMIM: 602837) dnaJ homolog subfamily ( 240) 370 84.6 2.4e-16
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A ( 412) 371 84.9 3.3e-16
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409) 370 84.7 3.7e-16
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B ( 409) 370 84.7 3.7e-16
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409) 370 84.7 3.7e-16
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411) 370 84.7 3.7e-16
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B ( 309) 361 82.8 1.1e-15
XP_006713582 (OMIM: 611337) PREDICTED: dnaJ homolo ( 232) 348 80.1 5.2e-15
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B ( 232) 348 80.1 5.2e-15
NP_036460 (OMIM: 602634) dnaJ homolog subfamily B ( 223) 343 79.1 1e-14
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453) 347 80.1 1e-14
>>NP_001304028 (OMIM: 611327) dnaJ homolog subfamily B m (337 aa)
initn: 2275 init1: 2275 opt: 2275 Z-score: 2503.9 bits: 471.7 E(85289): 1e-132
Smith-Waterman score: 2275; 99.7% identity (99.7% similar) in 337 aa overlap (1-337:1-337)
10 20 30 40 50 60
pF1KB5 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 REIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 ISRKRLNADGRSYRSEDKILTIEIKKGRKEGTKITFPREGDETPNSIPADIVFIIKDKDH
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
NP_001 ISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPF
250 260 270 280 290 300
310 320 330
pF1KB5 PKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
:::::::::::::::::::::::::::::::::::::
NP_001 PKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
310 320 330
>>NP_008965 (OMIM: 611327) dnaJ homolog subfamily B memb (337 aa)
initn: 2275 init1: 2275 opt: 2275 Z-score: 2503.9 bits: 471.7 E(85289): 1e-132
Smith-Waterman score: 2275; 99.7% identity (99.7% similar) in 337 aa overlap (1-337:1-337)
10 20 30 40 50 60
pF1KB5 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 REIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 REIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 DSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 ISRKRLNADGRSYRSEDKILTIEIKKGRKEGTKITFPREGDETPNSIPADIVFIIKDKDH
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
NP_008 ISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 PKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPF
250 260 270 280 290 300
310 320 330
pF1KB5 PKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
:::::::::::::::::::::::::::::::::::::
NP_008 PKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
310 320 330
>>NP_001304029 (OMIM: 611327) dnaJ homolog subfamily B m (297 aa)
initn: 1807 init1: 1807 opt: 1810 Z-score: 1994.1 bits: 377.2 E(85289): 2.5e-104
Smith-Waterman score: 1810; 98.9% identity (98.9% similar) in 270 aa overlap (68-337:28-297)
40 50 60 70 80 90
pF1KB5 SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHAT
: :::::::::::::::::::::::::::
NP_001 MQWCDLSHYNLCLPGSSDYPASASRVAGITGLKGGAGGTDGQGGTFRYTFHGDPHAT
10 20 30 40 50
100 110 120 130 140 150
pF1KB5 FAAFFGGSNPFEIFFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAAFFGGSNPFEIFFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQD
60 70 80 90 100 110
160 170 180 190 200 210
pF1KB5 PPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGRKEGTKITFP
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
NP_001 PPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFP
120 130 140 150 160 170
220 230 240 250 260 270
pF1KB5 REGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNI
180 190 200 210 220 230
280 290 300 310 320 330
pF1KB5 PMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
240 250 260 270 280 290
>>NP_006136 (OMIM: 604572) dnaJ homolog subfamily B memb (340 aa)
initn: 1150 init1: 1150 opt: 1565 Z-score: 1724.3 bits: 327.4 E(85289): 2.7e-89
Smith-Waterman score: 1565; 66.0% identity (84.9% similar) in 344 aa overlap (1-335:1-339)
10 20 30 40 50 60
pF1KB5 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
:::::: ::. .:::::.::.:::.:::..:::::: : :::::::.::::.:::::.:
NP_006 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
10 20 30 40 50 60
70 80 90 100 110
pF1KB5 REIYDQFGEEGLKGG--AGGTDG--QGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRM
:::.:..:::::::. .::. : .: .: ::::::::: :: :::: :::. :::.:
NP_006 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 GGGRDSEEMEIDGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEI
: : :.:: ::::.: ..:.:. :.:.. :.: :::::: :.::::::::
NP_006 G----EEGMDID-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEI
130 140 150 160 170
180 190 200 210 220 230
pF1KB5 YSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGRKEGTKITFPREGDETPNSIPADI
::::::.::::.:::: ::.: :.::::::::.::: :::::::::.:::.: :.:::::
NP_006 YSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 VFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRR
::..::: : ::::::..:: :.::::::::::..::::::::.::. .:...:::::
NP_006 VFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRR
240 250 260 270 280 290
300 310 320 330
pF1KB5 RIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
.. : :::.::.:..::::.::::: ::. : ..:. ::.. ::
NP_006 KVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
300 310 320 330 340
>>NP_001304031 (OMIM: 611327) dnaJ homolog subfamily B m (222 aa)
initn: 1481 init1: 1481 opt: 1481 Z-score: 1634.7 bits: 310.3 E(85289): 2.6e-84
Smith-Waterman score: 1481; 99.5% identity (99.5% similar) in 222 aa overlap (116-337:1-222)
90 100 110 120 130 140
pF1KB5 FRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRD
::::::::::::::::::::::::::::::
NP_001 MGGGRDSEEMEIDGDPFSAFGFSMNGYPRD
10 20 30
150 160 170 180 190 200
pF1KB5 RNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIK
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB5 KGRKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGC
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGC
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB5 SINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSS
160 170 180 190 200 210
330
pF1KB5 SKEVLRKHLPAS
::::::::::::
NP_001 SKEVLRKHLPAS
220
>>NP_001304030 (OMIM: 611327) dnaJ homolog subfamily B m (222 aa)
initn: 1481 init1: 1481 opt: 1481 Z-score: 1634.7 bits: 310.3 E(85289): 2.6e-84
Smith-Waterman score: 1481; 99.5% identity (99.5% similar) in 222 aa overlap (116-337:1-222)
90 100 110 120 130 140
pF1KB5 FRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRD
::::::::::::::::::::::::::::::
NP_001 MGGGRDSEEMEIDGDPFSAFGFSMNGYPRD
10 20 30
150 160 170 180 190 200
pF1KB5 RNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIK
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB5 KGRKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGC
:: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGC
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB5 SINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSS
160 170 180 190 200 210
330
pF1KB5 SKEVLRKHLPAS
::::::::::::
NP_001 SKEVLRKHLPAS
220
>>NP_001287843 (OMIM: 604572) dnaJ homolog subfamily B m (240 aa)
initn: 1051 init1: 1051 opt: 1077 Z-score: 1190.7 bits: 228.2 E(85289): 1.4e-59
Smith-Waterman score: 1077; 64.6% identity (84.0% similar) in 243 aa overlap (98-335:2-239)
70 80 90 100 110 120
pF1KB5 GEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGRDSEEMEI
:: :::: :::. :::.: : : :.:
NP_001 MFAEFFGGRNPFDTFFGQRNG----EEGMDI
10 20
130 140 150 160 170 180
pF1KB5 DGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKIS
: ::::.: ..:.:. :.:.. :.: :::::: :.::::::::::::::.::::
NP_001 D-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKIS
30 40 50 60 70 80
190 200 210 220 230 240
pF1KB5 RKRLNADGRSYRSEDKILTIEIKKGRKEGTKITFPREGDETPNSIPADIVFIIKDKDHPK
.:::: ::.: :.::::::::.::: :::::::::.:::.: :.:::::::..::: :
NP_001 HKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNI
90 100 110 120 130 140
250 260 270 280 290 300
pF1KB5 FKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPK
::::::..:: :.::::::::::..::::::::.::. .:...:::::.. : :::.::
NP_001 FKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPK
150 160 170 180 190 200
310 320 330
pF1KB5 NPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
.:..::::.::::: ::. : ..:. ::.. ::
NP_001 TPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
210 220 230 240
>>NP_001300893 (OMIM: 604572) dnaJ homolog subfamily B m (240 aa)
initn: 1051 init1: 1051 opt: 1077 Z-score: 1190.7 bits: 228.2 E(85289): 1.4e-59
Smith-Waterman score: 1077; 64.6% identity (84.0% similar) in 243 aa overlap (98-335:2-239)
70 80 90 100 110 120
pF1KB5 GEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGRDSEEMEI
:: :::: :::. :::.: : : :.:
NP_001 MFAEFFGGRNPFDTFFGQRNG----EEGMDI
10 20
130 140 150 160 170 180
pF1KB5 DGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKIS
: ::::.: ..:.:. :.:.. :.: :::::: :.::::::::::::::.::::
NP_001 D-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKIS
30 40 50 60 70 80
190 200 210 220 230 240
pF1KB5 RKRLNADGRSYRSEDKILTIEIKKGRKEGTKITFPREGDETPNSIPADIVFIIKDKDHPK
.:::: ::.: :.::::::::.::: :::::::::.:::.: :.:::::::..::: :
NP_001 HKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNI
90 100 110 120 130 140
250 260 270 280 290 300
pF1KB5 FKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPK
::::::..:: :.::::::::::..::::::::.::. .:...:::::.. : :::.::
NP_001 FKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPK
150 160 170 180 190 200
310 320 330
pF1KB5 NPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
.:..::::.::::: ::. : ..:. ::.. ::
NP_001 TPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
210 220 230 240
>>XP_006722797 (OMIM: 604572) PREDICTED: dnaJ homolog su (240 aa)
initn: 1051 init1: 1051 opt: 1077 Z-score: 1190.7 bits: 228.2 E(85289): 1.4e-59
Smith-Waterman score: 1077; 64.6% identity (84.0% similar) in 243 aa overlap (98-335:2-239)
70 80 90 100 110 120
pF1KB5 GEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGRDSEEMEI
:: :::: :::. :::.: : : :.:
XP_006 MFAEFFGGRNPFDTFFGQRNG----EEGMDI
10 20
130 140 150 160 170 180
pF1KB5 DGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKIS
: ::::.: ..:.:. :.:.. :.: :::::: :.::::::::::::::.::::
XP_006 D-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKIS
30 40 50 60 70 80
190 200 210 220 230 240
pF1KB5 RKRLNADGRSYRSEDKILTIEIKKGRKEGTKITFPREGDETPNSIPADIVFIIKDKDHPK
.:::: ::.: :.::::::::.::: :::::::::.:::.: :.:::::::..::: :
XP_006 HKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNI
90 100 110 120 130 140
250 260 270 280 290 300
pF1KB5 FKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPK
::::::..:: :.::::::::::..::::::::.::. .:...:::::.. : :::.::
XP_006 FKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPK
150 160 170 180 190 200
310 320 330
pF1KB5 NPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
.:..::::.::::: ::. : ..:. ::.. ::
XP_006 TPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
210 220 230 240
>>XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolog su (240 aa)
initn: 1051 init1: 1051 opt: 1077 Z-score: 1190.7 bits: 228.2 E(85289): 1.4e-59
Smith-Waterman score: 1077; 64.6% identity (84.0% similar) in 243 aa overlap (98-335:2-239)
70 80 90 100 110 120
pF1KB5 GEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGGGRDSEEMEI
:: :::: :::. :::.: : : :.:
XP_006 MFAEFFGGRNPFDTFFGQRNG----EEGMDI
10 20
130 140 150 160 170 180
pF1KB5 DGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEIYSGCTKRMKIS
: ::::.: ..:.:. :.:.. :.: :::::: :.::::::::::::::.::::
XP_006 D-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKIS
30 40 50 60 70 80
190 200 210 220 230 240
pF1KB5 RKRLNADGRSYRSEDKILTIEIKKGRKEGTKITFPREGDETPNSIPADIVFIIKDKDHPK
.:::: ::.: :.::::::::.::: :::::::::.:::.: :.:::::::..::: :
XP_006 HKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNI
90 100 110 120 130 140
250 260 270 280 290 300
pF1KB5 FKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYGLPFPK
::::::..:: :.::::::::::..::::::::.::. .:...:::::.. : :::.::
XP_006 FKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPK
150 160 170 180 190 200
310 320 330
pF1KB5 NPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
.:..::::.::::: ::. : ..:. ::.. ::
XP_006 TPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
210 220 230 240
337 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:02:07 2016 done: Fri Nov 4 04:02:08 2016
Total Scan time: 6.900 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]