Result of FASTA (ccds) for
pF1KB5647
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5647, 317 aa
1>>>pF1KB5647 317 - 317 aa - 317 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6214+/-0.000958; mu= 13.4533+/- 0.058
mean_var=60.5572+/-12.116, 0's: 0 Z-trim(103.7): 34 B-trim: 0 in 0/50
Lambda= 0.164813
statistics sampled from 7516 (7546) to 7516 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.232), width: 16
Scan time: 2.440
The best scores are: opt bits E(32554)
CCDS1612.1 LGALS8 gene_id:3964|Hs108|chr1 ( 317) 2075 502.0 2.4e-142
CCDS1611.1 LGALS8 gene_id:3964|Hs108|chr1 ( 359) 1198 293.5 1.6e-79
CCDS8045.1 LGALS12 gene_id:85329|Hs108|chr11 ( 336) 452 116.1 3.8e-26
CCDS44633.1 LGALS12 gene_id:85329|Hs108|chr11 ( 337) 441 113.5 2.3e-25
CCDS12521.1 LGALS4 gene_id:3960|Hs108|chr19 ( 323) 424 109.5 3.7e-24
CCDS53648.1 LGALS12 gene_id:85329|Hs108|chr11 ( 327) 414 107.1 1.9e-23
CCDS44634.1 LGALS12 gene_id:85329|Hs108|chr11 ( 275) 383 99.7 2.7e-21
CCDS42283.1 LGALS9B gene_id:284194|Hs108|chr17 ( 355) 348 91.4 1.1e-18
CCDS44635.1 LGALS12 gene_id:85329|Hs108|chr11 ( 266) 345 90.7 1.4e-18
CCDS82093.1 LGALS9 gene_id:3965|Hs108|chr17 ( 246) 342 90.0 2.1e-18
CCDS41956.1 LGALS3 gene_id:3958|Hs108|chr14 ( 250) 342 90.0 2.1e-18
CCDS32592.1 LGALS9 gene_id:3965|Hs108|chr17 ( 323) 342 90.0 2.7e-18
CCDS11222.1 LGALS9 gene_id:3965|Hs108|chr17 ( 355) 342 90.0 3e-18
CCDS32587.1 LGALS9C gene_id:654346|Hs108|chr17 ( 356) 342 90.0 3e-18
CCDS1877.1 LGALSL gene_id:29094|Hs108|chr2 ( 172) 304 80.9 8e-16
CCDS42565.1 LGALS7B gene_id:653499|Hs108|chr19 ( 136) 277 74.4 5.5e-14
CCDS33012.1 LGALS7 gene_id:3963|Hs108|chr19 ( 136) 277 74.4 5.5e-14
>>CCDS1612.1 LGALS8 gene_id:3964|Hs108|chr1 (317 aa)
initn: 2075 init1: 2075 opt: 2075 Z-score: 2669.0 bits: 502.0 E(32554): 2.4e-142
Smith-Waterman score: 2075; 98.7% identity (99.4% similar) in 317 aa overlap (1-317:1-317)
10 20 30 40 50 60
pF1KB5 MMLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICGHVPSDADRFQVDLQNGSSVKPRA
::::::::::::::::::.:::::::::::::::: :::::::::::::::::::.::::
CCDS16 MMLSLNNLQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 DVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 KHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSGT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PQLSLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFV
::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 PQLRLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 RNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 RNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSI
250 260 270 280 290 300
310
pF1KB5 DTLEINGDIHLLEVRSW
:::::::::::::::::
CCDS16 DTLEINGDIHLLEVRSW
310
>>CCDS1611.1 LGALS8 gene_id:3964|Hs108|chr1 (359 aa)
initn: 2062 init1: 1195 opt: 1198 Z-score: 1541.1 bits: 293.5 E(32554): 1.6e-79
Smith-Waterman score: 1910; 86.8% identity (87.4% similar) in 349 aa overlap (1-307:1-349)
10 20 30 40 50 60
pF1KB5 MMLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICGHVPSDADRFQVDLQNGSSVKPRA
::::::::::::::::::.:::::::::::::::: :::::::::::::::::::.::::
CCDS16 MMLSLNNLQNIIYNPVIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 DVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 KHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSGT
130 140 150 160 170 180
190
pF1KB5 PQLS------------------------------------------LPFAARLNTPMGPG
::: ::::::::::::::
CCDS16 PQLPSNRGGDISKIAPRTVYTKSKDSTVNHTLTCTKIPPMNYVSKRLPFAARLNTPMGPG
190 200 210 220 230 240
200 210 220 230 240 250
pF1KB5 RTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNITS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 RTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNITS
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB5 FPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 FPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW
310 320 330 340 350
>>CCDS8045.1 LGALS12 gene_id:85329|Hs108|chr11 (336 aa)
initn: 499 init1: 246 opt: 452 Z-score: 582.9 bits: 116.1 E(32554): 3.8e-26
Smith-Waterman score: 529; 32.9% identity (60.1% similar) in 316 aa overlap (8-316:38-336)
10 20 30
pF1KB5 MMLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICG
:: ...::.::: :: : : .... :
CCDS80 RAPGTRIYSWSCPTVMSPGEKLDPIPDSFILQPPVFHPVVPYVTTIFGGLHAGKMVMLQG
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 HVPSDADRFQVDLQNGSSVKPRADVAFHFNPRFKRAG-CIVCNTLINEKWGREEITYDTP
:: :: :::::.: : :. :: :.::::::::. . ..:::: . .: ::
CCDS80 VVPLDAHRFQVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB5 FKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSD
..: .:: :... ... .:.:::.: : . .:. ..:::::.: . ....::
CCDS80 LRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRLPLSHVDTLGIFGDILVEAVGF-----
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB5 LQSTQASSLELTEISRENVPKSG-----TPQLSLPFAARLNTPMGPGRTVVVKGEVNANA
:. . ..: ::: : . .:.: .: . : ..::....:.: : .
CCDS80 LNINP-----FVEGSRE-YPAGHPFLLMSPRLEVPCSHALPQGLSPGQVIIVRGLVLQEP
190 200 210 220 230
220 230 240 250 260 270
pF1KB5 KSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQES-WGEEERNITSFPFSPGMYFEMI
: :.:.: .: : : : .:. .. : ::... . : : : .::..
CCDS80 KHFTVSL-----RDQAAH-APVTLRASFADRTLAWISRWGQKKLISAPFLFYPQRFFEVL
240 250 260 270 280 290
280 290 300 310
pF1KB5 IYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW
. . .:.:.:: . . : .. :.:.:...: :.:
CCDS80 LLFQEGGLKLALNGQGLGATSMNQQALEQLRELRISGSVQLYCVHS
300 310 320 330
>>CCDS44633.1 LGALS12 gene_id:85329|Hs108|chr11 (337 aa)
initn: 486 init1: 186 opt: 441 Z-score: 568.8 bits: 113.5 E(32554): 2.3e-25
Smith-Waterman score: 518; 32.8% identity (60.3% similar) in 317 aa overlap (8-316:38-337)
10 20 30
pF1KB5 MMLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICG
:: ...::.::: :: : : .... :
CCDS44 RAPGTRIYSWSCPTVMSPGEKLDPIPDSFILQPPVFHPVVPYVTTIFGGLHAGKMVMLQG
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 HVPSDA-DRFQVDLQNGSSVKPRADVAFHFNPRFKRAG-CIVCNTLINEKWGREEITYDT
:: :: .:::::.: : :. :: :.::::::::. . ..:::: . .: ::
CCDS44 VVPLDAHSRFQVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHL
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB5 PFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSS
..: .:: :... ... .:.:::.: : . .:. ..:::::.: . ....::
CCDS44 ALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRLPLSHVDTLGIFGDILVEAVGF----
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB5 DLQSTQASSLELTEISRENVPKSG-----TPQLSLPFAARLNTPMGPGRTVVVKGEVNAN
:. . ..: ::: : . .:.: .: . : ..::....:.: : .
CCDS44 -LNINP-----FVEGSRE-YPAGHPFLLMSPRLEVPCSHALPQGLSPGQVIIVRGLVLQE
190 200 210 220 230
220 230 240 250 260
pF1KB5 AKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQES-WGEEERNITSFPFSPGMYFEM
: :.:.: .: : : : .:. .. : ::... . : : : .::.
CCDS44 PKHFTVSL-----RDQAAH-APVTLRASFADRTLAWISRWGQKKLISAPFLFYPQRFFEV
240 250 260 270 280 290
270 280 290 300 310
pF1KB5 IIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW
.. . .:.:.:: . . : .. :.:.:...: :.:
CCDS44 LLLFQEGGLKLALNGQGLGATSMNQQALEQLRELRISGSVQLYCVHS
300 310 320 330
>>CCDS12521.1 LGALS4 gene_id:3960|Hs108|chr19 (323 aa)
initn: 710 init1: 386 opt: 424 Z-score: 547.2 bits: 109.5 E(32554): 3.7e-24
Smith-Waterman score: 702; 37.3% identity (64.3% similar) in 314 aa overlap (13-315:13-322)
10 20 30 40 50 60
pF1KB5 MMLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICGHVPSDADRFQVDLQNGSSVKPRA
:::..:: :: :. : . : : . :: :.. :.. : .
CCDS12 MAYVPAPGYQPTYNPTLPYYQPIPGGLNVGMSVYIQGVASEHMKRFFVNFVVGQD--PGS
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 DVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNG
:::::::::: .: ::: . ::: :: . :::. .::.:..:: ....:.:::
CCDS12 DVAFHFNPRFDGWDKVVFNTLQGGKWGSEERKRSMPFKKGAAFELVFIVLAEHYKVVVNG
60 70 80 90 100 110
130 140 150 160
pF1KB5 KHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSL-----------ELTE
. ::::. . . : . : ....::.: .. :. . .:.
CCDS12 NPFYEYGHRLPLQMVTHLQVDGDLQLQSINFIGGQPLRPQGPPMMPPYPGPGHCHQQLNS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB5 ISRENVPKSGTPQLSLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALH
. . : . .: .:. .::. . ::...:: : ..::: ... .:.: :::::
CCDS12 LPTMEGPPTFNPP--VPYFGRLQGGLTARRTIIIKGYVPPTGKSFAINFKVGSSGDIALH
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 LNPRLNIKAFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLE
.:::.. . ::::.:. ::: ::..:: ::.::..:.. : : . .::: .:: : ..
CCDS12 INPRMGNGTVVRNSLLNGSWGSEEKKITHNPFGPGQFFDLSIRCGLDRFKVYANGQHLFD
240 250 260 270 280 290
290 300 310
pF1KB5 YKHRFKELSSIDTLEINGDIHLLEVRSW
. ::.. .. .:::::.::. : :.
CCDS12 FAHRLSAFQRVDTLEIQGDVTLSYVQI
300 310 320
>>CCDS53648.1 LGALS12 gene_id:85329|Hs108|chr11 (327 aa)
initn: 499 init1: 246 opt: 414 Z-score: 534.3 bits: 107.1 E(32554): 1.9e-23
Smith-Waterman score: 513; 32.8% identity (59.8% similar) in 311 aa overlap (8-316:38-327)
10 20 30
pF1KB5 MMLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICG
:: ...::.::: :: : : .... :
CCDS53 RAPGTRIYSWSCPTVMSPGEKLDPIPDSFILQPPVFHPVVPYVTTIFGGLHAGKMVMLQG
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 HVPSDADRFQVDLQNGSSVKPRADVAFHFNPRFKRAG-CIVCNTLINEKWGREEITYDTP
:: :: :::::.: : :. :: :.::::::::. . ..:::: . .: ::
CCDS53 VVPLDAHRFQVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB5 FKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSD
..: .:: :... ... .:.:::.: : . .:. ..:::::.: . ....::
CCDS53 LRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRLPLSHVDTLGIFGDILVEAVGF-----
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB5 LQSTQASSLELTEISRENVPKSGTPQLSLPFAARLNTPMGPGRTVVVKGEVNANAKSFNV
:. . ..: ::: : . .: . : ..::....:.: : . : :.:
CCDS53 LNINP-----FVEGSRE-YPAGHE----VPCSHALPQGLSPGQVIIVRGLVLQEPKHFTV
190 200 210 220 230
220 230 240 250 260 270
pF1KB5 DLLAGKSKDIALHLNPRLNIKAFVRNSFLQES-WGEEERNITSFPFSPGMYFEMIIYCDV
.: .: : : : .:. .. : ::... . : : : .::... .
CCDS53 SL-----RDQAAH-APVTLRASFADRTLAWISRWGQKKLISAPFLFYPQRFFEVLLLFQE
240 250 260 270 280
280 290 300 310
pF1KB5 REFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRSW
.:.:.:: . . : .. :.:.:...: :.:
CCDS53 GGLKLALNGQGLGATSMNQQALEQLRELRISGSVQLYCVHS
290 300 310 320
>>CCDS44634.1 LGALS12 gene_id:85329|Hs108|chr11 (275 aa)
initn: 430 init1: 186 opt: 383 Z-score: 495.7 bits: 99.7 E(32554): 2.7e-21
Smith-Waterman score: 460; 31.5% identity (59.2% similar) in 292 aa overlap (32-316:1-275)
10 20 30 40 50 60
pF1KB5 MLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICGHVPSDADRFQVDLQNGSSVKPRAD
.... : :: :: :::::.: : :. :: :
CCDS44 MVMLQGVVPLDAHRFQVDFQCGCSLCPRPD
10 20 30
70 80 90 100 110 120
pF1KB5 VAFHFNPRFKRAG-CIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNG
.::::::::. . ..:::: . .: :: ..: .:: :... ... .:.:::
CCDS44 IAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNG
40 50 60 70 80 90
130 140 150 160 170
pF1KB5 KHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSG-
.: : . .:. ..:::::.: . ....:: . ..: ::: : .
CCDS44 QHFLHFRYRLPLSHVDTLGIFGDILVEAVGF----------LNINPFVEGSRE-YPAGHP
100 110 120 130
180 190 200 210 220 230
pF1KB5 ----TPQLSLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLN
.:.: .: . : ..::....:.: : . : :.:.: .: : : :
CCDS44 FLLMSPRLEVPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSL-----RDQAAH-APVTL
140 150 160 170 180 190
240 250 260 270 280 290
pF1KB5 IKAFVRNSFLQES-WGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRF
.:. .. : ::... . : : : .::... . .:.:.:: .
CCDS44 RASFADRTLAWISRWGQKKLISAPFLFYPQRFFEVLLLFQEGGLKLALNGQGLGATSMNQ
200 210 220 230 240 250
300 310
pF1KB5 KELSSIDTLEINGDIHLLEVRSW
. : .. :.:.:...: :.:
CCDS44 QALEQLRELRISGSVQLYCVHS
260 270
>>CCDS42283.1 LGALS9B gene_id:284194|Hs108|chr17 (355 aa)
initn: 515 init1: 249 opt: 348 Z-score: 448.9 bits: 91.4 E(32554): 1.1e-18
Smith-Waterman score: 570; 30.5% identity (59.8% similar) in 351 aa overlap (3-305:1-344)
10 20 30 40 50
pF1KB5 MMLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICGHV-PSDADRFQVDLQNGSSVKPR
..... : .:..:. ::: :. : :.. : : :.. :: ::.:.: :
CCDS42 MAFSGSQAPYLSPAVPFSGTIQGGLQDGFQITVNGAVLSSSGTRFAVDFQTGFS---G
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 ADVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVN
:.::::::::. .: .:::: . .:: :: . ::.. :.. ..: .. :.: ::
CCDS42 NDIAFHFNPRFEDGGYVVCNTRQKGRWGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVN
60 70 80 90 100 110
120 130 140 150
pF1KB5 GKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGF----------SFSSD-------------
:. . : ::. ...::... :.:.. :.: .::.
CCDS42 GSLFVQYFHRVPFHRVDTISVNGSVQLSYISFQNPRTVPVQPAFSTVPFSQPVCFPPRPR
120 130 140 150 160 170
160 170 180 190
pF1KB5 ---------------------LQSTQASSLELTEISRENVPKSGTPQ--LSLPFAARLNT
....:..: .. .: .: :. .:: . .
CCDS42 GRRQKPPSVRPANPAPITQTVIHTVQSASGQM--FSTPAIPPMMYPHPAYPMPFITTIPG
180 190 200 210 220 230
200 210 220 230 240 250
pF1KB5 PMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEE
. :.......: : .:. :...: .:. ::.:.:::.. .: :::. ...::: ::
CCDS42 GLYPSKSIILSGTVLPSAQRFHINLCSGS--HIAFHMNPRFDENAVVRNTQINNSWGSEE
240 250 260 270 280 290
260 270 280 290 300 310
pF1KB5 RNIT-SFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLL
:.. ..:: :. : . : :... .::::.: : .:: ::...: .:. ::.
CCDS42 RSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHVFEYYHRLRNLPTINKLEVGGDIQLT
300 310 320 330 340 350
pF1KB5 EVRSW
CCDS42 HVQT
>>CCDS44635.1 LGALS12 gene_id:85329|Hs108|chr11 (266 aa)
initn: 430 init1: 186 opt: 345 Z-score: 447.1 bits: 90.7 E(32554): 1.4e-18
Smith-Waterman score: 444; 31.7% identity (59.2% similar) in 287 aa overlap (32-316:1-266)
10 20 30 40 50 60
pF1KB5 MLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICGHVPSDADRFQVDLQNGSSVKPRAD
.... : :: :: :::::.: : :. :: :
CCDS44 MVMLQGVVPLDAHRFQVDFQCGCSLCPRPD
10 20 30
70 80 90 100 110 120
pF1KB5 VAFHFNPRFKRAG-CIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNG
.::::::::. . ..:::: . .: :: ..: .:: :... ... .:.:::
CCDS44 IAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNG
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 KHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFSFSSDLQSTQASSLELTEISRENVPKSGT
.: : . .:. ..:::::.: . ....:: . ..: ::: : .:
CCDS44 QHFLHFRYRLPLSHVDTLGIFGDILVEAVGF----------LNINPFVEGSRE-YP-AGH
100 110 120 130
190 200 210 220 230 240
pF1KB5 PQLSLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNIKAFV
.: . : ..::....:.: : . : :.:.: .: : : : .:.
CCDS44 E---VPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSL-----RDQAAH-APVTLRASFA
140 150 160 170 180
250 260 270 280 290
pF1KB5 RNSFLQES-WGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSS
.. : ::... . : : : .::... . .:.:.:: . . : .
CCDS44 DRTLAWISRWGQKKLISAPFLFYPQRFFEVLLLFQEGGLKLALNGQGLGATSMNQQALEQ
190 200 210 220 230 240
300 310
pF1KB5 IDTLEINGDIHLLEVRSW
. :.:.:...: :.:
CCDS44 LRELRISGSVQLYCVHS
250 260
>>CCDS82093.1 LGALS9 gene_id:3965|Hs108|chr17 (246 aa)
initn: 248 init1: 248 opt: 342 Z-score: 443.8 bits: 90.0 E(32554): 2.1e-18
Smith-Waterman score: 356; 28.9% identity (60.4% similar) in 225 aa overlap (3-212:1-220)
10 20 30 40 50
pF1KB5 MMLSLNNLQNIIYNPVIPYVGTIPDQLDPGTLIVICGHV-PSDADRFQVDLQNGSSVKPR
..... : .:..:. ::: :. : :.. : : :.. :: :..:.: : .
CCDS82 MAFSGSQAPYLSPAVPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSGN--
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 ADVAFHFNPRFKRAGCIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVN
:.::::::::. .: .:::: : .:: :: ::.. :.. ..: .. :.: ::
CCDS82 -DIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVN
60 70 80 90 100 110
120 130 140 150 160
pF1KB5 GKHTLLYGHRIGPEKIDTLGIYGKVNIHSIGFS------------FSSDLQSTQASSLEL
: . : ::. ...::... :.:.. :.:. .. ....:.. ..
CCDS82 GILFVQYFHRVPFHRVDTISVNGSVQLSYISFQPPGVWPANPAPITQTVIHTVQSAPGQM
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB5 TEISRENVPKSGTPQ--LSLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKD
.: .: :. .:: . . . :.......: : .:.
CCDS82 --FSTPAIPPMMYPHPAYPMPFITTILGGLYPSKSILLSGTVLPSAQRCGSCVKLTASRW
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 IALHLNPRLNIKAFVRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGV
CCDS82 PWMVSTCLNTTIA
240
317 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 04:00:53 2016 done: Fri Nov 4 04:00:53 2016
Total Scan time: 2.440 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]