Result of FASTA (omim) for
pF1KB5520
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5520, 334 aa
1>>>pF1KB5520 334 - 334 aa - 334 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8729+/-0.000283; mu= 11.3972+/- 0.018
mean_var=138.6767+/-28.369, 0's: 0 Z-trim(122.8): 99 B-trim: 50 in 1/52
Lambda= 0.108911
statistics sampled from 41368 (41470) to 41368 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.486), width: 16
Scan time: 9.440
The best scores are: opt bits E(85289)
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 2297 371.5 1.4e-102
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 2297 371.5 1.4e-102
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 2297 371.5 1.4e-102
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326) 2084 338.0 1.6e-92
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257) 1581 258.9 8.5e-69
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241) 1573 257.6 1.9e-68
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B ( 309) 1033 172.9 8.1e-43
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211) 818 138.9 9e-33
XP_006713582 (OMIM: 611337) PREDICTED: dnaJ homolo ( 232) 721 123.7 3.7e-28
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B ( 232) 721 123.7 3.7e-28
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277) 573 100.5 4.3e-21
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324) 573 100.6 4.8e-21
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B ( 340) 420 76.6 8.6e-14
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337) 413 75.5 1.8e-13
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B ( 337) 413 75.5 1.8e-13
XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 394 72.5 1.5e-12
XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 394 72.5 1.5e-12
NP_036398 (OMIM: 611328) dnaJ homolog subfamily B ( 348) 394 72.5 1.5e-12
NP_001128477 (OMIM: 611328) dnaJ homolog subfamily ( 420) 394 72.6 1.7e-12
XP_011516144 (OMIM: 611328) PREDICTED: dnaJ homolo ( 420) 394 72.6 1.7e-12
NP_001128476 (OMIM: 611328) dnaJ homolog subfamily ( 462) 394 72.6 1.8e-12
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316) 368 68.4 2.3e-11
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A ( 397) 369 68.6 2.5e-11
NP_036460 (OMIM: 602634) dnaJ homolog subfamily B ( 223) 340 63.9 3.8e-10
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453) 338 63.8 8.1e-10
NP_005138 (OMIM: 608382) dnaJ homolog subfamily A ( 480) 338 63.8 8.4e-10
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily ( 77) 317 59.9 2.1e-09
XP_011543315 (OMIM: 610263,617091) PREDICTED: dnaJ ( 246) 322 61.1 2.9e-09
XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ ( 350) 322 61.2 3.8e-09
NP_057390 (OMIM: 611341) dnaJ homolog subfamily B ( 358) 321 61.0 4.3e-09
XP_016873168 (OMIM: 610263,617091) PREDICTED: dnaJ ( 218) 308 58.8 1.2e-08
XP_011543316 (OMIM: 610263,617091) PREDICTED: dnaJ ( 218) 308 58.8 1.2e-08
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B ( 409) 312 59.7 1.3e-08
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409) 312 59.7 1.3e-08
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409) 312 59.7 1.3e-08
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411) 312 59.7 1.3e-08
NP_079495 (OMIM: 611203) dnaJ homolog subfamily C ( 198) 290 56.0 8.1e-08
XP_011527351 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198) 290 56.0 8.1e-08
XP_011527350 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198) 290 56.0 8.1e-08
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A ( 412) 289 56.1 1.6e-07
NP_001012339 (OMIM: 617048,617052) dnaJ homolog su ( 531) 287 55.8 2.3e-07
XP_005248307 (OMIM: 617048,617052) PREDICTED: dnaJ ( 553) 287 55.9 2.4e-07
NP_919259 (OMIM: 617048,617052) dnaJ homolog subfa ( 576) 287 55.9 2.5e-07
XP_011512268 (OMIM: 617048,617052) PREDICTED: dnaJ ( 598) 287 55.9 2.6e-07
XP_005248306 (OMIM: 617048,617052) PREDICTED: dnaJ ( 631) 287 55.9 2.7e-07
XP_011512267 (OMIM: 617048,617052) PREDICTED: dnaJ ( 676) 287 55.9 2.8e-07
XP_016876164 (OMIM: 601184,616192) PREDICTED: dnaJ ( 383) 280 54.6 3.9e-07
XP_016876163 (OMIM: 601184,616192) PREDICTED: dnaJ ( 421) 280 54.7 4.2e-07
XP_011519407 (OMIM: 601184,616192) PREDICTED: dnaJ ( 450) 280 54.7 4.4e-07
NP_006251 (OMIM: 601184,616192) dnaJ homolog subfa ( 504) 280 54.7 4.8e-07
>>XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ hom (334 aa)
initn: 2297 init1: 2297 opt: 2297 Z-score: 1962.6 bits: 371.5 E(85289): 1.4e-102
Smith-Waterman score: 2297; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
250 260 270 280 290 300
310 320 330
pF1KB5 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
::::::::::::::::::::::::::::::::::
XP_005 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
310 320 330
>>XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ hom (334 aa)
initn: 2297 init1: 2297 opt: 2297 Z-score: 1962.6 bits: 371.5 E(85289): 1.4e-102
Smith-Waterman score: 2297; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
250 260 270 280 290 300
310 320 330
pF1KB5 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
::::::::::::::::::::::::::::::::::
XP_011 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
310 320 330
>>XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ hom (334 aa)
initn: 2297 init1: 2297 opt: 2297 Z-score: 1962.6 bits: 371.5 E(85289): 1.4e-102
Smith-Waterman score: 2297; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
250 260 270 280 290 300
310 320 330
pF1KB5 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
::::::::::::::::::::::::::::::::::
XP_005 VQREAAVEQAQSETSLGARGQRGHKPRLGCCVLT
310 320 330
>>NP_490647 (OMIM: 603511,611332) dnaJ homolog subfamily (326 aa)
initn: 2156 init1: 2072 opt: 2084 Z-score: 1781.9 bits: 338.0 E(85289): 1.6e-92
Smith-Waterman score: 2084; 93.8% identity (96.6% similar) in 325 aa overlap (1-324:1-325)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_490 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
250 260 270 280 290 300
310 320 330
pF1KB5 VQREAAVE-QAQSETSLGARGQRGHKPRLGCCVLT
... . . : : : : .. .:.
NP_490 LKEGGKRKKQKQREESKKKKSTKGNH
310 320
>>XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ hom (257 aa)
initn: 1659 init1: 1575 opt: 1581 Z-score: 1356.1 bits: 258.9 E(85289): 8.5e-69
Smith-Waterman score: 1581; 95.1% identity (97.5% similar) in 244 aa overlap (1-244:1-244)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
:::::::::::::::::::::::::::::::::::::::::::::::::::. . .
XP_006 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGLKEGGKRKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
...:
XP_006 QKQREESKKKKSTKGNH
250
>>NP_005485 (OMIM: 603511,611332) dnaJ homolog subfamily (241 aa)
initn: 1573 init1: 1573 opt: 1573 Z-score: 1349.7 bits: 257.6 E(85289): 1.9e-68
Smith-Waterman score: 1573; 100.0% identity (100.0% similar) in 231 aa overlap (1-231:1-231)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGKEQLLRLDN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
NP_005 K
>>NP_660157 (OMIM: 611336) dnaJ homolog subfamily B memb (309 aa)
initn: 766 init1: 465 opt: 1033 Z-score: 889.7 bits: 172.9 E(85289): 8.1e-43
Smith-Waterman score: 1033; 64.7% identity (83.9% similar) in 249 aa overlap (1-248:1-243)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
:::::::::.::.::::::::::.:.:::::::::::::::::::::.:::::::::. .
NP_660 MVDYYEVLGLQRYASPEDIKKAYHKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNDE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
::::::::: ::::::: ::::. :.::::..:::::.:.: :::::: :::: .:
NP_660 KRDIYDKYGTEGLNGGG---SHFDDECEYGFTFHKPDDVFKEIFHERDPFSFHFFEDSLE
70 80 90 100 110
130 140 150 160 170
pF1KB5 DFFGNRRGPR-GSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTS
:.. :: : :.:.: .: :::. : .: : :::.:::.:: ::::: ::::::: .
NP_660 DLL-NRPGSSYGNRNRDAGYFFSTASEYPIF-EKFSSYDTGYTSQGSLGHEGLTSFSSLA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 FGGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALA
: .::: :. :..:: :.::::.:.::.:.:. ::: :.:..:.: . .:.::.....:
NP_660 FDNSGMDNYISVTTSDKIVNGRNINTKKIIESDQER-EAEDNGELTFFLVNSVANEEGFA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 EERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAA
.: : :.
NP_660 KECSWRTQSFNNYSPNSHSSKHVSQYTFVDNDEGGISWVTSNRDPPIFSAGVKEGGKRKK
240 250 260 270 280 290
>>XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ hom (211 aa)
initn: 1334 init1: 818 opt: 818 Z-score: 709.3 bits: 138.9 E(85289): 9e-33
Smith-Waterman score: 1086; 58.5% identity (61.2% similar) in 325 aa overlap (1-324:1-210)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFF-----
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
XP_016 ------------------------------------------------------------
190 200 210 220 230 240
pF1KB5 GGSGMGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDALAE
::::::::::
XP_016 --------------------------------------------------GVADDDALAE
120
250 260 270 280 290 300
pF1KB5 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASAAG
130 140 150 160 170 180
310 320 330
pF1KB5 VQREAAVE-QAQSETSLGARGQRGHKPRLGCCVLT
... . . : : : : .. .:.
XP_016 LKEGGKRKKQKQREESKKKKSTKGNH
190 200 210
>>XP_006713582 (OMIM: 611337) PREDICTED: dnaJ homolog su (232 aa)
initn: 699 init1: 628 opt: 721 Z-score: 626.4 bits: 123.7 E(85289): 3.7e-28
Smith-Waterman score: 954; 63.1% identity (83.3% similar) in 233 aa overlap (1-231:1-222)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
:..:::::::: :::::::::::::::.:::::::.::::::.::: :.::::::::.:
XP_006 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
::..::. : .. .:::... . :::. :.:::::.:.::::::: :::::.:...:
XP_006 KRSLYDRAGCDSWRAGGGASTPYHSPFDTGYTFRNPEDIFREFFGGLDPFSFEFWDSP--
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
:.. :: :: :: .: ..:. ::.: .::::. .: : :. :.::::::
XP_006 --FNSDRGGRGHGLRG--AFSAGFGEFPAFMEAFSSFNM----LGCSG-GSHTTFSSTSF
120 130 140 150 160
190 200 210 220 230
pF1KB5 GGSGMGN--FKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDAL
:::. :. :::. .::.:.::.:.:::::::::::::::::::::::.:.::
XP_006 GGSSSGSSGFKSVMSSTEMINGHKVTTKRIVENGQERVEVEEDGQLKSVTVNGKEQLKWM
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 AEERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASA
XP_006 DSK
230
>>NP_699161 (OMIM: 611337) dnaJ homolog subfamily B memb (232 aa)
initn: 699 init1: 628 opt: 721 Z-score: 626.4 bits: 123.7 E(85289): 3.7e-28
Smith-Waterman score: 954; 63.1% identity (83.3% similar) in 233 aa overlap (1-231:1-222)
10 20 30 40 50 60
pF1KB5 MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAK
:..:::::::: :::::::::::::::.:::::::.::::::.::: :.::::::::.:
NP_699 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFE
::..::. : .. .:::... . :::. :.:::::.:.::::::: :::::.:...:
NP_699 KRSLYDRAGCDSWRAGGGASTPYHSPFDTGYTFRNPEDIFREFFGGLDPFSFEFWDSP--
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 DFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSF
:.. :: :: :: .: ..:. ::.: .::::. .: : :. :.::::::
NP_699 --FNSDRGGRGHGLRG--AFSAGFGEFPAFMEAFSSFNM----LGCSG-GSHTTFSSTSF
120 130 140 150 160
190 200 210 220 230
pF1KB5 GGSGMGN--FKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGVADDDAL
:::. :. :::. .::.:.::.:.:::::::::::::::::::::::.:.::
NP_699 GGSSSGSSGFKSVMSSTEMINGHKVTTKRIVENGQERVEVEEDGQLKSVTVNGKEQLKWM
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 AEERMRRGQNALPAQPAGLRPPKPPRPASLLRHAPHCLSEEEGEQDRPRAPGPWDPLASA
NP_699 DSK
230
334 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:37:34 2016 done: Thu Nov 3 22:37:35 2016
Total Scan time: 9.440 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]