Result of FASTA (ccds) for
pF1KB5482
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5482, 245 aa
1>>>pF1KB5482 245 - 245 aa - 245 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5733+/-0.000758; mu= 13.0489+/- 0.046
mean_var=63.6813+/-12.431, 0's: 0 Z-trim(107.9): 37 B-trim: 8 in 2/49
Lambda= 0.160719
statistics sampled from 9808 (9845) to 9808 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.302), width: 16
Scan time: 2.290
The best scores are: opt bits E(32554)
CCDS14665.1 FGF13 gene_id:2258|Hs108|chrX ( 245) 1605 380.4 5.8e-106
CCDS14664.1 FGF13 gene_id:2258|Hs108|chrX ( 192) 1209 288.6 2e-78
CCDS55512.1 FGF13 gene_id:2258|Hs108|chrX ( 199) 1208 288.4 2.5e-78
CCDS55511.1 FGF13 gene_id:2258|Hs108|chrX ( 226) 1202 287.0 7.3e-78
CCDS55513.1 FGF13 gene_id:2258|Hs108|chrX ( 255) 1202 287.0 8.1e-78
CCDS9501.1 FGF14 gene_id:2259|Hs108|chr13 ( 247) 1123 268.7 2.6e-72
CCDS3301.1 FGF12 gene_id:2257|Hs108|chr3 ( 243) 1062 254.5 4.6e-68
CCDS9500.1 FGF14 gene_id:2259|Hs108|chr13 ( 252) 919 221.4 4.6e-58
CCDS46983.1 FGF12 gene_id:2257|Hs108|chr3 ( 181) 856 206.7 8.5e-54
CCDS11105.1 FGF11 gene_id:2256|Hs108|chr17 ( 225) 823 199.1 2.1e-51
CCDS5998.1 FGF20 gene_id:26281|Hs108|chr8 ( 211) 394 99.6 1.7e-21
CCDS9298.1 FGF9 gene_id:2254|Hs108|chr13 ( 208) 391 98.9 2.7e-21
CCDS75996.1 FGF16 gene_id:8823|Hs108|chrX ( 207) 376 95.5 3e-20
CCDS3950.1 FGF10 gene_id:2255|Hs108|chr5 ( 208) 330 84.8 5e-17
CCDS34021.1 FGF5 gene_id:2250|Hs108|chr4 ( 268) 319 82.3 3.6e-16
CCDS10131.1 FGF7 gene_id:2252|Hs108|chr15 ( 194) 308 79.7 1.6e-15
CCDS8527.1 FGF6 gene_id:2251|Hs108|chr12 ( 208) 288 75.1 4.2e-14
CCDS8194.1 FGF4 gene_id:2249|Hs108|chr11 ( 206) 280 73.2 1.5e-13
CCDS12037.1 FGF22 gene_id:27006|Hs108|chr19 ( 170) 268 70.4 8.8e-13
CCDS4275.1 FGF1 gene_id:2246|Hs108|chr5 ( 155) 260 68.5 2.9e-12
CCDS8195.1 FGF3 gene_id:2248|Hs108|chr11 ( 239) 244 64.9 5.7e-11
>>CCDS14665.1 FGF13 gene_id:2258|Hs108|chrX (245 aa)
initn: 1605 init1: 1605 opt: 1605 Z-score: 2015.8 bits: 380.4 E(32554): 5.8e-106
Smith-Waterman score: 1605; 100.0% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KB5 MAAAIASSLIRQKRQAREREKSNACKCVSSPSKGKTSCDKNKLNVFSRVKLFGSKKRRRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAAAIASSLIRQKRQAREREKSNACKCVSSPSKGKTSCDKNKLNVFSRVKLFGSKKRRRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 RPEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RPEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQTK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LYLAMNSEGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LYLAMNSEGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMS
190 200 210 220 230 240
pF1KB5 HNEST
:::::
CCDS14 HNEST
>>CCDS14664.1 FGF13 gene_id:2258|Hs108|chrX (192 aa)
initn: 1209 init1: 1209 opt: 1209 Z-score: 1521.3 bits: 288.6 E(32554): 2e-78
Smith-Waterman score: 1209; 97.9% identity (98.4% similar) in 188 aa overlap (58-245:5-192)
30 40 50 60 70 80
pF1KB5 VSSPSKGKTSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADG
:. :::::::::::::::::::::::::
CCDS14 MALLRKSYSEPQLKGIVTKLYSRQGYHLQLQADG
10 20 30
90 100 110 120 130 140
pF1KB5 TIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB5 FENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEP
100 110 120 130 140 150
210 220 230 240
pF1KB5 SLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
::::::::::::::::::::::::::::::::::::::
CCDS14 SLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
160 170 180 190
>>CCDS55512.1 FGF13 gene_id:2258|Hs108|chrX (199 aa)
initn: 1202 init1: 1202 opt: 1208 Z-score: 1519.8 bits: 288.4 E(32554): 2.5e-78
Smith-Waterman score: 1208; 94.4% identity (96.4% similar) in 196 aa overlap (50-245:4-199)
20 30 40 50 60 70
pF1KB5 EKSNACKCVSSPSKGKTSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGY
:. :... :::::::::::::::::
CCDS55 MSGKVTKPKEEKDASKEPQLKGIVTKLYSRQGY
10 20 30
80 90 100 110 120 130
pF1KB5 HLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 HLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTP
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 ECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 ECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPL
100 110 120 130 140 150
200 210 220 230 240
pF1KB5 KVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
160 170 180 190
>>CCDS55511.1 FGF13 gene_id:2258|Hs108|chrX (226 aa)
initn: 1202 init1: 1202 opt: 1202 Z-score: 1511.4 bits: 287.0 E(32554): 7.3e-78
Smith-Waterman score: 1202; 100.0% identity (100.0% similar) in 183 aa overlap (63-245:44-226)
40 50 60 70 80 90
pF1KB5 KGKTSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGT
::::::::::::::::::::::::::::::
CCDS55 KKESPFRAKCHEIFCCPLKQVHHKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGT
20 30 40 50 60 70
100 110 120 130 140 150
pF1KB5 KDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYY
80 90 100 110 120 130
160 170 180 190 200 210
pF1KB5 VTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDL
140 150 160 170 180 190
220 230 240
pF1KB5 TEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
:::::::::::::::::::::::::::::::::
CCDS55 TEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
200 210 220
>>CCDS55513.1 FGF13 gene_id:2258|Hs108|chrX (255 aa)
initn: 1202 init1: 1202 opt: 1202 Z-score: 1510.5 bits: 287.0 E(32554): 8.1e-78
Smith-Waterman score: 1202; 100.0% identity (100.0% similar) in 183 aa overlap (63-245:73-255)
40 50 60 70 80 90
pF1KB5 KGKTSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGT
::::::::::::::::::::::::::::::
CCDS55 KKESPFRAKCHEIFCCPLKQVHHKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGT
50 60 70 80 90 100
100 110 120 130 140 150
pF1KB5 KDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYY
110 120 130 140 150 160
160 170 180 190 200 210
pF1KB5 VTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDL
170 180 190 200 210 220
220 230 240
pF1KB5 TEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
:::::::::::::::::::::::::::::::::
CCDS55 TEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
230 240 250
>>CCDS9501.1 FGF14 gene_id:2259|Hs108|chr13 (247 aa)
initn: 1118 init1: 1032 opt: 1123 Z-score: 1411.8 bits: 268.7 E(32554): 2.6e-72
Smith-Waterman score: 1123; 67.6% identity (88.7% similar) in 247 aa overlap (1-245:1-247)
10 20 30 40 50
pF1KB5 MAAAIASSLIRQKRQARER--EKSNACKCVSSPSKGKTSCDKNKLNVFSRVKLFGSKKRR
:::::::.::::::::::. .. .: . :::::.. :. : ...::.:..:: ::::
CCDS95 MAAAIASGLIRQKRQAREQHWDRPSASRRRSSPSKNRGLCNGNLVDIFSKVRIFGLKKRR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 RRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQ
:: .::::::::.:: ::::.::.. ::..:::::.... ::::::::::::::::::.
CCDS95 LRRQDPQLKGIVTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 TKLYLAMNSEGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGE
: ::.:::.::::: :::::::::::::::::::: ::::.::::.:::.:.:::::::.
CCDS95 TGLYIAMNGEGYLYPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQ
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 IMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKS
::::.:::.:::::::::::.::::.::::::. : . . ::.:: :.:...::::
CCDS95 AMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKP
190 200 210 220 230 240
240
pF1KB5 MSHNEST
......:
CCDS95 VNKSKTT
>>CCDS3301.1 FGF12 gene_id:2257|Hs108|chr3 (243 aa)
initn: 1062 init1: 851 opt: 1062 Z-score: 1335.4 bits: 254.5 E(32554): 4.6e-68
Smith-Waterman score: 1062; 65.7% identity (86.5% similar) in 251 aa overlap (1-244:1-243)
10 20 30 40 50
pF1KB5 MAAAIASSLIRQKRQARER--EKSNACKCVSSPSK-GKTSCDKNKLNVFSRVKLFGSKKR
:::::::::::::::::: .. .: : ::::: :.. :... :.:::.:.. ...::
CCDS33 MAAAIASSLIRQKRQARESNSDRVSASKRRSSPSKDGRSLCERHVLGVFSKVRFCSGRKR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 R-RRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQG
:::::::::::::.:.:.::: ::.. ::::::::::.: ::::::::::::::::::
CCDS33 PVRRRPEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 VQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKE
:...::.:::.:::::.:..::::::::::::::::: ::: .::::.:::.:.::::::
CCDS33 VKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB5 GEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTE---FSRSGSGTPTKSRSVSGVL
:.:::::.:::.::..::.:::..: ::.:::::.. : ::..::::: .
CCDS33 GQIMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEIGEKQGRSRKSSGTPT--------M
190 200 210 220 230
240
pF1KB5 NGGKSMSHNEST
:::: .... .
CCDS33 NGGKVVNQDST
240
>>CCDS9500.1 FGF14 gene_id:2259|Hs108|chr13 (252 aa)
initn: 938 init1: 902 opt: 919 Z-score: 1156.0 bits: 221.4 E(32554): 4.6e-58
Smith-Waterman score: 919; 65.9% identity (87.0% similar) in 208 aa overlap (44-245:45-252)
20 30 40 50 60
pF1KB5 RQAREREKSNACKCVSSPSKGKTSCDKNKLNVFSRVK-----LFGSKKRRRRRP-EPQLK
:.::. : :.. .. . : .::::
CCDS95 LLLCNHKDLFFLRVSKLLDCFSPKSMWFLWNIFSKGTHMLQCLCGKSLKKNKNPTDPQLK
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB5 GIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNS
::::.:: ::::.::.. ::..:::::.... ::::::::::::::::::.: ::.:::.
CCDS95 GIVTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNG
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB5 EGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKK
::::: :::::::::::::::::::: ::::.::::.:::.:.:::::::. ::::.:::
CCDS95 EGYLYPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKK
140 150 160 170 180 190
190 200 210 220 230 240
pF1KB5 NKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
.:::::::::::.::::.::::::. : . . ::.:: :.:...:::: ......:
CCDS95 TKPAAHFLPKPLEVAMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT
200 210 220 230 240 250
>>CCDS46983.1 FGF12 gene_id:2257|Hs108|chr3 (181 aa)
initn: 887 init1: 820 opt: 856 Z-score: 1079.3 bits: 206.7 E(32554): 8.5e-54
Smith-Waterman score: 856; 68.6% identity (88.6% similar) in 185 aa overlap (63-244:5-181)
40 50 60 70 80 90
pF1KB5 KGKTSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGT
:::::::::.:.:.::: ::.. :::::::
CCDS46 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT
10 20 30
100 110 120 130 140 150
pF1KB5 KDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYY
:::.: :::::::::::::::::::...::.:::.:::::.:..::::::::::::::::
CCDS46 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB5 VTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDL
: ::: .::::.:::.:.:::::::.:::::.:::.::..::.:::..: ::.:::::..
CCDS46 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEI
100 110 120 130 140 150
220 230 240
pF1KB5 TE---FSRSGSGTPTKSRSVSGVLNGGKSMSHNEST
: ::..::::: .:::: .... .
CCDS46 GEKQGRSRKSSGTPT--------MNGGKVVNQDST
160 170 180
>>CCDS11105.1 FGF11 gene_id:2256|Hs108|chr17 (225 aa)
initn: 817 init1: 715 opt: 823 Z-score: 1036.5 bits: 199.1 E(32554): 2.1e-51
Smith-Waterman score: 823; 58.7% identity (80.0% similar) in 225 aa overlap (3-223:2-225)
10 20 30 40 50
pF1KB5 MAAAIASSLIRQKRQAREREKS---NACKCVSSPSKGKTSCDKNKLNVFSRVKLFGSKKR
::.:::::::::..:: : .: . : : :. :.:. : ..:.:.: :..
CCDS11 MAALASSLIRQKREVREPGGSRPVSAQRRVC-PRGTKSLCQKQLLILLSKVRLCGGRPA
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 RRRR-PEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQG
: : ::::::::::::. :::..:: . ::.:.:: .. :..: :::::::::::.::.
CCDS11 RPDRGPEPQLKGIVTKLFCRQGFYLQANPDGSIQGTPEDTSSFTHFNLIPVGLRVVTIQS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 VQTKLYLAMNSEGYLYTSELFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKE
.. :.:::.:: ::.: :: ::.::: ::::::: :.: .:::..:::.:::::.::
CCDS11 AKLGHYMAMNAEGLLYSSPHFTAECRFKECVFENYYVLYASALYRQRRSGRAWYLGLDKE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 GEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGG
:..::::.:::.: ::::::: :.::::.:::::.. : : :. .:
CCDS11 GQVMKGNRVKKTKAAAHFLPKLLEVAMYQEPSLHSVPEASPSSPPAP
180 190 200 210 220
240
pF1KB5 KSMSHNEST
245 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:01:34 2016 done: Sat Nov 5 13:01:34 2016
Total Scan time: 2.290 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]