Result of FASTA (omim) for
pF1KB5462
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5462, 376 aa
1>>>pF1KB5462 376 - 376 aa - 376 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0460+/-0.000432; mu= 17.9781+/- 0.027
mean_var=60.2859+/-11.992, 0's: 0 Z-trim(109.3): 39 B-trim: 56 in 1/52
Lambda= 0.165183
statistics sampled from 17452 (17491) to 17452 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.575), E-opt: 0.2 (0.205), width: 16
Scan time: 8.010
The best scores are: opt bits E(85289)
NP_005726 (OMIM: 605144) beta-centractin [Homo sap ( 376) 2486 601.2 1.2e-171
NP_005727 (OMIM: 605143) alpha-centractin [Homo sa ( 376) 2344 567.4 1.9e-161
XP_016858605 (OMIM: 605144) PREDICTED: beta-centra ( 332) 2176 527.3 1.9e-149
XP_005263911 (OMIM: 605144) PREDICTED: beta-centra ( 302) 1976 479.7 3.9e-135
NP_005150 (OMIM: 102540,612098,612794,613424) acti ( 377) 1451 354.6 2.2e-97
NP_001186883 (OMIM: 102560,604717,614583) actin, c ( 375) 1448 353.9 3.6e-97
NP_001605 (OMIM: 102560,604717,614583) actin, cyto ( 375) 1448 353.9 3.6e-97
NP_001092 (OMIM: 102630,243310,607371,608578) acti ( 375) 1448 353.9 3.6e-97
NP_001091 (OMIM: 102610,161800,255310,616852) acti ( 377) 1446 353.4 5e-97
NP_001135417 (OMIM: 102620,611788,613834,614042) a ( 377) 1443 352.7 8.1e-97
NP_001604 (OMIM: 102620,611788,613834,614042) acti ( 377) 1443 352.7 8.1e-97
NP_001307784 (OMIM: 102620,611788,613834,614042) a ( 377) 1443 352.7 8.1e-97
NP_001606 (OMIM: 102545) actin, gamma-enteric smoo ( 376) 1440 352.0 1.3e-96
NP_001017992 (OMIM: 614835) beta-actin-like protei ( 376) 1425 348.4 1.6e-95
XP_016859649 (OMIM: 608914) PREDICTED: POTE ankyri ( 657) 1366 334.5 4.3e-91
XP_011509518 (OMIM: 608914) PREDICTED: POTE ankyri ( 957) 1366 334.6 5.9e-91
XP_016859648 (OMIM: 608914) PREDICTED: POTE ankyri ( 967) 1366 334.6 6e-91
XP_016859650 (OMIM: 608914) PREDICTED: POTE ankyri (1075) 1366 334.6 6.5e-91
NP_001077007 (OMIM: 608914) POTE ankyrin domain fa (1075) 1366 334.6 6.5e-91
NP_001186822 (OMIM: 102545) actin, gamma-enteric s ( 333) 1119 275.5 1.3e-73
NP_115876 (OMIM: 608534) actin-related protein T3 ( 372) 1069 263.6 5.4e-70
NP_536356 (OMIM: 608535) actin-related protein T2 ( 377) 1046 258.1 2.5e-68
NP_612146 (OMIM: 300487) actin-related protein T1 ( 376) 1014 250.5 4.8e-66
NP_005713 (OMIM: 604221) actin-related protein 2 i ( 394) 1012 250.0 7e-66
NP_001005386 (OMIM: 604221) actin-related protein ( 399) 1001 247.4 4.4e-65
NP_006677 (OMIM: 604304) actin-like protein 7B [Ho ( 415) 940 232.8 1.1e-60
NP_006678 (OMIM: 604303) actin-like protein 7A [Ho ( 435) 930 230.5 5.8e-60
NP_005712 (OMIM: 604222) actin-related protein 3 i ( 418) 497 127.3 6.5e-29
NP_001264069 (OMIM: 604222) actin-related protein ( 367) 477 122.5 1.6e-27
NP_057272 (OMIM: 612458) actin-like protein 6B [Ho ( 426) 416 108.0 4.3e-23
NP_829888 (OMIM: 604958) actin-like protein 6A iso ( 387) 342 90.3 8e-18
NP_817126 (OMIM: 604958) actin-like protein 6A iso ( 387) 342 90.3 8e-18
NP_004292 (OMIM: 604958) actin-like protein 6A iso ( 429) 342 90.3 8.7e-18
>>NP_005726 (OMIM: 605144) beta-centractin [Homo sapiens (376 aa)
initn: 2486 init1: 2486 opt: 2486 Z-score: 3202.5 bits: 601.2 E(85289): 1.2e-171
Smith-Waterman score: 2486; 100.0% identity (100.0% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KB5 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSK
310 320 330 340 350 360
370
pF1KB5 KEYEEDGSRAIHRKTF
::::::::::::::::
NP_005 KEYEEDGSRAIHRKTF
370
>>NP_005727 (OMIM: 605143) alpha-centractin [Homo sapien (376 aa)
initn: 2344 init1: 2344 opt: 2344 Z-score: 3019.6 bits: 567.4 E(85289): 1.9e-161
Smith-Waterman score: 2344; 90.4% identity (98.9% similar) in 376 aa overlap (1-376:1-376)
10 20 30 40 50 60
pF1KB5 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
:::::.::::::::::::::::::::::::::::::::::::::.::::::::::.::::
NP_005 MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
:::::::::.::::::::.:.:::::::::::::::::::::::::::::::::::: ::
NP_005 KAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ
::.:::::::::.::: ::::: :::.:.:::.:..::::::::::::::::.:::::.:
NP_005 MRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVL
: ::::::...::.:::::::::.:::.:.::::.:::..:::.:::::::::::.::::
NP_005 YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSK
:::::::::::::::::::::::::.::.:::::::::::::::::::::::::::::::
NP_005 SGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSK
310 320 330 340 350 360
370
pF1KB5 KEYEEDGSRAIHRKTF
:::::::.:.::::::
NP_005 KEYEEDGARSIHRKTF
370
>>XP_016858605 (OMIM: 605144) PREDICTED: beta-centractin (332 aa)
initn: 2176 init1: 2176 opt: 2176 Z-score: 2804.0 bits: 527.3 E(85289): 1.9e-149
Smith-Waterman score: 2176; 100.0% identity (100.0% similar) in 332 aa overlap (45-376:1-332)
20 30 40 50 60 70
pF1KB5 DNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTIRYP
::::::::::::::::::::::::::::::
XP_016 MRVMAGALEGDLFIGPKAEEHRGLLTIRYP
10 20 30
80 90 100 110 120 130
pF1KB5 MEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB5 PALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYL
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB5 RLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPA
160 170 180 190 200 210
260 270 280 290 300 310
pF1KB5 RFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGFGDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGFGDRL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB5 LSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRK
280 290 300 310 320 330
pF1KB5 TF
::
XP_016 TF
>>XP_005263911 (OMIM: 605144) PREDICTED: beta-centractin (302 aa)
initn: 1976 init1: 1976 opt: 1976 Z-score: 2547.0 bits: 479.7 E(85289): 3.9e-135
Smith-Waterman score: 1976; 100.0% identity (100.0% similar) in 302 aa overlap (75-376:1-302)
50 60 70 80 90 100
pF1KB5 MRVMAGALEGDLFIGPKAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSE
::::::::::::::::::::::::::::::
XP_005 MEHGVVRDWNDMERIWQYVYSKDQLQTFSE
10 20 30
110 120 130 140 150 160
pF1KB5 EHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGV
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 THAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 THAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB5 SINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIH
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB5 KSDMDLRRTLFANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KSDMDLRRTLFANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGG
220 230 240 250 260 270
350 360 370
pF1KB5 SILASLDTFKKMWVSKKEYEEDGSRAIHRKTF
::::::::::::::::::::::::::::::::
XP_005 SILASLDTFKKMWVSKKEYEEDGSRAIHRKTF
280 290 300
>>NP_005150 (OMIM: 102540,612098,612794,613424) actin, a (377 aa)
initn: 1442 init1: 582 opt: 1451 Z-score: 1869.4 bits: 354.6 E(85289): 2.2e-97
Smith-Waterman score: 1451; 54.9% identity (82.2% similar) in 370 aa overlap (12-376:10-377)
10 20 30 40 50 60
pF1KB5 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
.: :::::..:::::::. :. ::. ::::.:. ::.: . : ..:
NP_005 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
.:. .::.::..::.:::.. .:.:::.::.... ..:.. ::::.:::::::::. :
NP_005 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::: ....::::::::.....::::::::.:::::.:::::::::: ::::::.:.::.:
NP_005 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230
pF1KB5 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALET----
::.:.::::.. :: .: ..: .: :.:: :.:: :::. ::.... ... : .
NP_005 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 -EKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLF
:: .: ::::... .: ::: :: ::::...: :: :.::.. .: : :.:.:. :.
NP_005 LEK-SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLY
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 ANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKK
:: :::::.:.. :..::. .:. :::. .:::: :: :: ::.::::::::::.::..
NP_005 ANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ
300 310 320 330 340 350
360 370
pF1KB5 MWVSKKEYEEDGSRAIHRKTF
::.::.::.: : .::: :
NP_005 MWISKQEYDEAGPSIVHRKCF
360 370
>>NP_001186883 (OMIM: 102560,604717,614583) actin, cytop (375 aa)
initn: 1442 init1: 581 opt: 1448 Z-score: 1865.6 bits: 353.9 E(85289): 3.6e-97
Smith-Waterman score: 1448; 54.9% identity (82.7% similar) in 370 aa overlap (12-376:8-375)
10 20 30 40 50 60
pF1KB5 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
.:::::::. :::::::. :. ::. ::::.:. ::.: . : ..:
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
.:. .::.::..::.:::.: .:.:::.::.... ..:.. ::::::::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::: ....:::::.::.....::::::::.:::::.:.::::::::.::::::.:.::.:
NP_001 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230
pF1KB5 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALET----
.:.:.::::.. :: .: ..: .: :.:: :.:: :::. ::.... ... : .
NP_001 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 -EKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLF
:: .: ::::... .: ::: :: ::::...: :: :.::.. .: : :.:.:. :.
NP_001 LEK-SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLY
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 ANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKK
:: :::::.:.. :..::. .:. :::. .:::: :: :: ::.::::::::::.::..
NP_001 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ
300 310 320 330 340 350
360 370
pF1KB5 MWVSKKEYEEDGSRAIHRKTF
::.::.::.:.: .::: :
NP_001 MWISKQEYDESGPSIVHRKCF
360 370
>>NP_001605 (OMIM: 102560,604717,614583) actin, cytoplas (375 aa)
initn: 1442 init1: 581 opt: 1448 Z-score: 1865.6 bits: 353.9 E(85289): 3.6e-97
Smith-Waterman score: 1448; 54.9% identity (82.7% similar) in 370 aa overlap (12-376:8-375)
10 20 30 40 50 60
pF1KB5 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
.:::::::. :::::::. :. ::. ::::.:. ::.: . : ..:
NP_001 MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
.:. .::.::..::.:::.: .:.:::.::.... ..:.. ::::::::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::: ....:::::.::.....::::::::.:::::.:.::::::::.::::::.:.::.:
NP_001 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230
pF1KB5 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALET----
.:.:.::::.. :: .: ..: .: :.:: :.:: :::. ::.... ... : .
NP_001 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 -EKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLF
:: .: ::::... .: ::: :: ::::...: :: :.::.. .: : :.:.:. :.
NP_001 LEK-SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLY
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 ANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKK
:: :::::.:.. :..::. .:. :::. .:::: :: :: ::.::::::::::.::..
NP_001 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ
300 310 320 330 340 350
360 370
pF1KB5 MWVSKKEYEEDGSRAIHRKTF
::.::.::.:.: .::: :
NP_001 MWISKQEYDESGPSIVHRKCF
360 370
>>NP_001092 (OMIM: 102630,243310,607371,608578) actin, c (375 aa)
initn: 1432 init1: 581 opt: 1448 Z-score: 1865.6 bits: 353.9 E(85289): 3.6e-97
Smith-Waterman score: 1448; 54.4% identity (82.0% similar) in 377 aa overlap (5-376:4-375)
10 20 30 40 50 60
pF1KB5 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
:: : .:.:::::. :::::::. :. ::. ::::.:. ::.: . : ..:
NP_001 MDDDIAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
.:. .::.::..::.:::.: .:.:::.::.... ..:.. ::::::::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::: ....:::::.::.....::::::::.:::::.:.::::::::.::::::.:.::.:
NP_001 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230
pF1KB5 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALET----
.:.:.::::.. :: .: ..: .: :.:: :.:: :::. ::.... ... : .
NP_001 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 -EKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLF
:: .: ::::... .: ::: :: ::::...: :: :.::.. .: : :.:.:. :.
NP_001 LEK-SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLY
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 ANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKK
:: :::::.:.. :..::. .:. :::. .:::: :: :: ::.::::::::::.::..
NP_001 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ
300 310 320 330 340 350
360 370
pF1KB5 MWVSKKEYEEDGSRAIHRKTF
::.::.::.:.: .::: :
NP_001 MWISKQEYDESGPSIVHRKCF
360 370
>>NP_001091 (OMIM: 102610,161800,255310,616852) actin, a (377 aa)
initn: 1437 init1: 582 opt: 1446 Z-score: 1863.0 bits: 353.4 E(85289): 5e-97
Smith-Waterman score: 1446; 54.3% identity (82.2% similar) in 370 aa overlap (12-376:10-377)
10 20 30 40 50 60
pF1KB5 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
.: :::::..:::::::. :. ::. ::::.:. ::.: . : ..:
NP_001 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
.:. .::.::..::.:::.. .:.:::.::.... ..:.. ::::.:::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFY-NELRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::: ....::::::::.....::::::::.:::::.:::::::::: ::::::.:.::.:
NP_001 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230
pF1KB5 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALET----
::.:.::::.. :: .: ..: .: :.:: :.:: :::. ::.... ... : .
NP_001 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 -EKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLF
:: .: ::::... .: ::: :: ::::...: :: :.::.. .: : :.:.:. :.
NP_001 LEK-SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLY
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 ANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKK
:: :.:::.:.. :..::. .:. :::. .:::: :: :: ::.::::::::::.::..
NP_001 ANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ
300 310 320 330 340 350
360 370
pF1KB5 MWVSKKEYEEDGSRAIHRKTF
::..:.::.: : .::: :
NP_001 MWITKQEYDEAGPSIVHRKCF
360 370
>>NP_001135417 (OMIM: 102620,611788,613834,614042) actin (377 aa)
initn: 1434 init1: 582 opt: 1443 Z-score: 1859.1 bits: 352.7 E(85289): 8.1e-97
Smith-Waterman score: 1443; 54.9% identity (81.6% similar) in 370 aa overlap (12-376:10-377)
10 20 30 40 50 60
pF1KB5 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGP
.: :::::. :::::::. :. ::. ::::.:. ::.: . : ..:
NP_001 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 KAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN
.:. .::.::..::.:::.. .:.:::.::.. . ..:.. ::::.:::::::::. :
NP_001 EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFY-NELRVAPEEHPTLLTEAPLNPKAN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSI
::: ....::::::::.....::::::::.:::::.:::::::::: ::::::.:.::.:
NP_001 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAI
120 130 140 150 160 170
190 200 210 220 230
pF1KB5 MRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALET----
::.:.::::.. :: .: ..: .: :.:: :.:: :::. ::.... ... : .
NP_001 MRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 -EKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLF
:: .: ::::... .: ::: :: ::::...: :: :.::.. .: : :.:.:. :.
NP_001 LEK-SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLY
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 ANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKK
:: :::::.:.. :..::. .:. :::. .:::: :: :: ::.::::::::::.::..
NP_001 ANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ
300 310 320 330 340 350
360 370
pF1KB5 MWVSKKEYEEDGSRAIHRKTF
::.::.::.: : .::: :
NP_001 MWISKQEYDEAGPSIVHRKCF
360 370
376 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:51:05 2016 done: Sat Nov 5 12:51:06 2016
Total Scan time: 8.010 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]