Result of FASTA (omim) for
pF1KB5452
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5452, 422 aa
1>>>pF1KB5452 422 - 422 aa - 422 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1629+/-0.000381; mu= 17.7635+/- 0.024
mean_var=65.6231+/-13.543, 0's: 0 Z-trim(113.2): 73 B-trim: 582 in 2/56
Lambda= 0.158324
statistics sampled from 22361 (22434) to 22361 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.263), width: 16
Scan time: 7.680
The best scores are: opt bits E(85289)
NP_003774 (OMIM: 603018) beta-1,3-galactosyltransf ( 422) 2925 677.1 2.2e-194
NP_066191 (OMIM: 603093) beta-1,3-galactosyltransf ( 326) 1000 237.4 4.1e-62
XP_005246988 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 1000 237.4 4.1e-62
XP_006712882 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 1000 237.4 4.1e-62
XP_011510387 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 1000 237.4 4.1e-62
XP_016883728 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883729 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883718 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883719 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883727 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883730 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
NP_149361 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 749 180.0 7.2e-45
XP_016883720 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883717 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883725 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883726 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883716 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883721 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
NP_149360 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 749 180.0 7.2e-45
NP_006048 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 749 180.0 7.2e-45
XP_016883724 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
NP_001265579 (OMIM: 604066) beta-1,3-galactosyltra ( 310) 749 180.0 7.2e-45
XP_016883722 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
XP_016883723 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 749 180.0 7.2e-45
NP_149362 (OMIM: 604066) beta-1,3-galactosyltransf ( 314) 749 180.0 7.3e-45
XP_016862897 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
NP_149359 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 649 157.2 5.7e-38
XP_005247919 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_016862898 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_005247921 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_016862894 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_005247916 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_006713866 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
NP_003772 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 649 157.2 5.7e-38
XP_016862899 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_005247918 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
NP_149357 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 649 157.2 5.7e-38
NP_149358 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 649 157.2 5.7e-38
NP_001033717 (OMIM: 111400,603094,615021) UDP-GalN ( 331) 649 157.2 5.7e-38
XP_016862896 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_016862895 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_006713867 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_006713868 (OMIM: 111400,603094,615021) PREDICTE ( 331) 649 157.2 5.7e-38
XP_016862891 (OMIM: 111400,603094,615021) PREDICTE ( 451) 649 157.3 7.4e-38
XP_016862893 (OMIM: 111400,603094,615021) PREDICTE ( 451) 649 157.3 7.4e-38
XP_016862892 (OMIM: 111400,603094,615021) PREDICTE ( 451) 649 157.3 7.4e-38
XP_005247881 (OMIM: 615333) PREDICTED: lactosylcer ( 378) 607 147.6 4.9e-35
NP_114436 (OMIM: 615333) lactosylceramide 1,3-N-ac ( 378) 607 147.6 4.9e-35
XP_011511529 (OMIM: 615333) PREDICTED: lactosylcer ( 378) 607 147.6 4.9e-35
XP_011511531 (OMIM: 615333) PREDICTED: lactosylcer ( 378) 607 147.6 4.9e-35
>>NP_003774 (OMIM: 603018) beta-1,3-galactosyltransferas (422 aa)
initn: 2925 init1: 2925 opt: 2925 Z-score: 3610.7 bits: 677.1 E(85289): 2.2e-194
Smith-Waterman score: 2925; 100.0% identity (100.0% similar) in 422 aa overlap (1-422:1-422)
10 20 30 40 50 60
pF1KB5 MLQWRRRHCCFAKMTWNAKRSLFRTHLIGVLSLVFLFAMFLFFNHHDWLPGRAGFKENPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MLQWRRRHCCFAKMTWNAKRSLFRTHLIGVLSLVFLFAMFLFFNHHDWLPGRAGFKENPV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TYTFRGFRSTKSETNHSSLRNIWKETVPQTLRPQTATNSNNTDLSPQGVTGLENTLSANG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 TYTFRGFRSTKSETNHSSLRNIWKETVPQTLRPQTATNSNNTDLSPQGVTGLENTLSANG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 SIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWGNESLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWGNESLA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGMNWVAT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSKWYMPP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 DLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRIDPVPPPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRIDPVPPPN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 EFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNKHNACANAAKEKAGRYRHRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 EFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNKHNACANAAKEKAGRYRHRK
370 380 390 400 410 420
pF1KB5 LH
::
NP_003 LH
>>NP_066191 (OMIM: 603093) beta-1,3-galactosyltransferas (326 aa)
initn: 858 init1: 342 opt: 1000 Z-score: 1236.0 bits: 237.4 E(85289): 4.1e-62
Smith-Waterman score: 1000; 52.2% identity (77.4% similar) in 274 aa overlap (132-405:59-326)
110 120 130 140 150 160
pF1KB5 TDLSPQGVTGLENTLSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEP
: . :...::::.::... :::..::..
NP_066 TSSYTGSKPFSHLTVARKNFTFGNIRTRPINPHSFEFLINEPNKCEKNIPFLVILISTTH
30 40 50 60 70 80
170 180 190 200 210 220
pF1KB5 GQIEARRAIRQTWGNESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYL
...::.:::.:::.:. ::.:. .:::: . . :.. . .::. .:::: ....
NP_066 KEFDARQAIRETWGDENNFKGIKIATLFLLGKNA--DPVLNQMVEQESQIFHDIIVEDFI
90 100 110 120 130 140
230 240 250 260 270 280
pF1KB5 DTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGY
:.:.:::.:::::: ::::.: . ::::::::.::: . :: :::::. ::. :::::
NP_066 DSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGY
150 160 170 180 190 200
290 300 310 320 330 340
pF1KB5 LMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLED
.. : .: :. :::::: ::::. :: :::::::.::.:.:: :.:.:: : :::::
NP_066 VING-GPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLED
210 220 230 240 250 260
350 360 370 380 390 400
pF1KB5 VYVGICLAKLRIDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNK
::::.:: :: : : . ::::...:: :.: ..:: ::..: :. . :: ....:
NP_066 VYVGLCLRKLGIHPFQNSG---FNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSSKK
270 280 290 300 310 320
410 420
pF1KB5 HNACANAAKEKAGRYRHRKLH
: :
NP_066 HLRC
>>XP_005246988 (OMIM: 603093) PREDICTED: beta-1,3-galact (326 aa)
initn: 858 init1: 342 opt: 1000 Z-score: 1236.0 bits: 237.4 E(85289): 4.1e-62
Smith-Waterman score: 1000; 52.2% identity (77.4% similar) in 274 aa overlap (132-405:59-326)
110 120 130 140 150 160
pF1KB5 TDLSPQGVTGLENTLSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEP
: . :...::::.::... :::..::..
XP_005 TSSYTGSKPFSHLTVARKNFTFGNIRTRPINPHSFEFLINEPNKCEKNIPFLVILISTTH
30 40 50 60 70 80
170 180 190 200 210 220
pF1KB5 GQIEARRAIRQTWGNESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYL
...::.:::.:::.:. ::.:. .:::: . . :.. . .::. .:::: ....
XP_005 KEFDARQAIRETWGDENNFKGIKIATLFLLGKNA--DPVLNQMVEQESQIFHDIIVEDFI
90 100 110 120 130 140
230 240 250 260 270 280
pF1KB5 DTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGY
:.:.:::.:::::: ::::.: . ::::::::.::: . :: :::::. ::. :::::
XP_005 DSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGY
150 160 170 180 190 200
290 300 310 320 330 340
pF1KB5 LMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLED
.. : .: :. :::::: ::::. :: :::::::.::.:.:: :.:.:: : :::::
XP_005 VING-GPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLED
210 220 230 240 250 260
350 360 370 380 390 400
pF1KB5 VYVGICLAKLRIDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNK
::::.:: :: : : . ::::...:: :.: ..:: ::..: :. . :: ....:
XP_005 VYVGLCLRKLGIHPFQNSG---FNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSSKK
270 280 290 300 310 320
410 420
pF1KB5 HNACANAAKEKAGRYRHRKLH
: :
XP_005 HLRC
>>XP_006712882 (OMIM: 603093) PREDICTED: beta-1,3-galact (326 aa)
initn: 858 init1: 342 opt: 1000 Z-score: 1236.0 bits: 237.4 E(85289): 4.1e-62
Smith-Waterman score: 1000; 52.2% identity (77.4% similar) in 274 aa overlap (132-405:59-326)
110 120 130 140 150 160
pF1KB5 TDLSPQGVTGLENTLSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEP
: . :...::::.::... :::..::..
XP_006 TSSYTGSKPFSHLTVARKNFTFGNIRTRPINPHSFEFLINEPNKCEKNIPFLVILISTTH
30 40 50 60 70 80
170 180 190 200 210 220
pF1KB5 GQIEARRAIRQTWGNESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYL
...::.:::.:::.:. ::.:. .:::: . . :.. . .::. .:::: ....
XP_006 KEFDARQAIRETWGDENNFKGIKIATLFLLGKNA--DPVLNQMVEQESQIFHDIIVEDFI
90 100 110 120 130 140
230 240 250 260 270 280
pF1KB5 DTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGY
:.:.:::.:::::: ::::.: . ::::::::.::: . :: :::::. ::. :::::
XP_006 DSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGY
150 160 170 180 190 200
290 300 310 320 330 340
pF1KB5 LMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLED
.. : .: :. :::::: ::::. :: :::::::.::.:.:: :.:.:: : :::::
XP_006 VING-GPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLED
210 220 230 240 250 260
350 360 370 380 390 400
pF1KB5 VYVGICLAKLRIDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNK
::::.:: :: : : . ::::...:: :.: ..:: ::..: :. . :: ....:
XP_006 VYVGLCLRKLGIHPFQNSG---FNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSSKK
270 280 290 300 310 320
410 420
pF1KB5 HNACANAAKEKAGRYRHRKLH
: :
XP_006 HLRC
>>XP_011510387 (OMIM: 603093) PREDICTED: beta-1,3-galact (326 aa)
initn: 858 init1: 342 opt: 1000 Z-score: 1236.0 bits: 237.4 E(85289): 4.1e-62
Smith-Waterman score: 1000; 52.2% identity (77.4% similar) in 274 aa overlap (132-405:59-326)
110 120 130 140 150 160
pF1KB5 TDLSPQGVTGLENTLSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEP
: . :...::::.::... :::..::..
XP_011 TSSYTGSKPFSHLTVARKNFTFGNIRTRPINPHSFEFLINEPNKCEKNIPFLVILISTTH
30 40 50 60 70 80
170 180 190 200 210 220
pF1KB5 GQIEARRAIRQTWGNESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYL
...::.:::.:::.:. ::.:. .:::: . . :.. . .::. .:::: ....
XP_011 KEFDARQAIRETWGDENNFKGIKIATLFLLGKNA--DPVLNQMVEQESQIFHDIIVEDFI
90 100 110 120 130 140
230 240 250 260 270 280
pF1KB5 DTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGY
:.:.:::.:::::: ::::.: . ::::::::.::: . :: :::::. ::. :::::
XP_011 DSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPRRRYFTGY
150 160 170 180 190 200
290 300 310 320 330 340
pF1KB5 LMRGYAPNRNKDSKWYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLED
.. : .: :. :::::: ::::. :: :::::::.::.:.:: :.:.:: : :::::
XP_011 VING-GPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLED
210 220 230 240 250 260
350 360 370 380 390 400
pF1KB5 VYVGICLAKLRIDPVPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNK
::::.:: :: : : . ::::...:: :.: ..:: ::..: :. . :: ....:
XP_011 VYVGLCLRKLGIHPFQNSG---FNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDMSSKK
270 280 290 300 310 320
410 420
pF1KB5 HNACANAAKEKAGRYRHRKLH
: :
XP_011 HLRC
>>XP_016883728 (OMIM: 604066) PREDICTED: beta-1,3-galact (310 aa)
initn: 753 init1: 344 opt: 749 Z-score: 926.5 bits: 180.0 E(85289): 7.2e-45
Smith-Waterman score: 749; 41.5% identity (70.8% similar) in 260 aa overlap (146-405:52-307)
120 130 140 150 160 170
pF1KB5 LSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWG
:.. :::.::... :. : :::::::
XP_016 YFSMYSLNPFKEQSFVYKKDGNFLKLPDTDCRQTPPFLVLLVTSSHKQLAERMAIRQTWG
30 40 50 60 70 80
180 190 200 210 220 230
pF1KB5 NESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGM
.: .. : :. .:::: . .. . . .::... ::::...::.:::::.::.::.
XP_016 KERMVKGKQLKTFFLLGTTS--SAAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGI
90 100 110 120 130
240 250 260 270 280 290
pF1KB5 NWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSK
.:: .::. .:::::::::.:..:: . ::: . : .:::.: . : :. ::
XP_016 EWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTR--FFTGFLKLNEFPIRQPFSK
140 150 160 170 180 190
300 310 320 330 340 350
pF1KB5 WYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRIDP
:.. . :: .::: ::::::::::::.: ....:: .. ..::::.::.:: .: :
XP_016 WFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNIRL
200 210 220 230 240 250
360 370 380 390 400 410
pF1KB5 VPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNKHNACANAAKEKAGR
.. .: . .: : . .... : ..: :. ::. :.... . :
XP_016 EELHSQPTFFPGGLRFSVCLFRRIVACHFIKPRTLLDYWQALENSRGEDCPPV
260 270 280 290 300 310
420
pF1KB5 YRHRKLH
>>XP_016883729 (OMIM: 604066) PREDICTED: beta-1,3-galact (310 aa)
initn: 753 init1: 344 opt: 749 Z-score: 926.5 bits: 180.0 E(85289): 7.2e-45
Smith-Waterman score: 749; 41.5% identity (70.8% similar) in 260 aa overlap (146-405:52-307)
120 130 140 150 160 170
pF1KB5 LSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWG
:.. :::.::... :. : :::::::
XP_016 YFSMYSLNPFKEQSFVYKKDGNFLKLPDTDCRQTPPFLVLLVTSSHKQLAERMAIRQTWG
30 40 50 60 70 80
180 190 200 210 220 230
pF1KB5 NESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGM
.: .. : :. .:::: . .. . . .::... ::::...::.:::::.::.::.
XP_016 KERMVKGKQLKTFFLLGTTS--SAAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGI
90 100 110 120 130
240 250 260 270 280 290
pF1KB5 NWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSK
.:: .::. .:::::::::.:..:: . ::: . : .:::.: . : :. ::
XP_016 EWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTR--FFTGFLKLNEFPIRQPFSK
140 150 160 170 180 190
300 310 320 330 340 350
pF1KB5 WYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRIDP
:.. . :: .::: ::::::::::::.: ....:: .. ..::::.::.:: .: :
XP_016 WFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNIRL
200 210 220 230 240 250
360 370 380 390 400 410
pF1KB5 VPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNKHNACANAAKEKAGR
.. .: . .: : . .... : ..: :. ::. :.... . :
XP_016 EELHSQPTFFPGGLRFSVCLFRRIVACHFIKPRTLLDYWQALENSRGEDCPPV
260 270 280 290 300 310
420
pF1KB5 YRHRKLH
>>XP_016883718 (OMIM: 604066) PREDICTED: beta-1,3-galact (310 aa)
initn: 753 init1: 344 opt: 749 Z-score: 926.5 bits: 180.0 E(85289): 7.2e-45
Smith-Waterman score: 749; 41.5% identity (70.8% similar) in 260 aa overlap (146-405:52-307)
120 130 140 150 160 170
pF1KB5 LSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWG
:.. :::.::... :. : :::::::
XP_016 YFSMYSLNPFKEQSFVYKKDGNFLKLPDTDCRQTPPFLVLLVTSSHKQLAERMAIRQTWG
30 40 50 60 70 80
180 190 200 210 220 230
pF1KB5 NESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGM
.: .. : :. .:::: . .. . . .::... ::::...::.:::::.::.::.
XP_016 KERMVKGKQLKTFFLLGTTS--SAAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGI
90 100 110 120 130
240 250 260 270 280 290
pF1KB5 NWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSK
.:: .::. .:::::::::.:..:: . ::: . : .:::.: . : :. ::
XP_016 EWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTR--FFTGFLKLNEFPIRQPFSK
140 150 160 170 180 190
300 310 320 330 340 350
pF1KB5 WYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRIDP
:.. . :: .::: ::::::::::::.: ....:: .. ..::::.::.:: .: :
XP_016 WFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNIRL
200 210 220 230 240 250
360 370 380 390 400 410
pF1KB5 VPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNKHNACANAAKEKAGR
.. .: . .: : . .... : ..: :. ::. :.... . :
XP_016 EELHSQPTFFPGGLRFSVCLFRRIVACHFIKPRTLLDYWQALENSRGEDCPPV
260 270 280 290 300 310
420
pF1KB5 YRHRKLH
>>XP_016883719 (OMIM: 604066) PREDICTED: beta-1,3-galact (310 aa)
initn: 753 init1: 344 opt: 749 Z-score: 926.5 bits: 180.0 E(85289): 7.2e-45
Smith-Waterman score: 749; 41.5% identity (70.8% similar) in 260 aa overlap (146-405:52-307)
120 130 140 150 160 170
pF1KB5 LSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWG
:.. :::.::... :. : :::::::
XP_016 YFSMYSLNPFKEQSFVYKKDGNFLKLPDTDCRQTPPFLVLLVTSSHKQLAERMAIRQTWG
30 40 50 60 70 80
180 190 200 210 220 230
pF1KB5 NESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGM
.: .. : :. .:::: . .. . . .::... ::::...::.:::::.::.::.
XP_016 KERMVKGKQLKTFFLLGTTS--SAAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGI
90 100 110 120 130
240 250 260 270 280 290
pF1KB5 NWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSK
.:: .::. .:::::::::.:..:: . ::: . : .:::.: . : :. ::
XP_016 EWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTR--FFTGFLKLNEFPIRQPFSK
140 150 160 170 180 190
300 310 320 330 340 350
pF1KB5 WYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRIDP
:.. . :: .::: ::::::::::::.: ....:: .. ..::::.::.:: .: :
XP_016 WFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNIRL
200 210 220 230 240 250
360 370 380 390 400 410
pF1KB5 VPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNKHNACANAAKEKAGR
.. .: . .: : . .... : ..: :. ::. :.... . :
XP_016 EELHSQPTFFPGGLRFSVCLFRRIVACHFIKPRTLLDYWQALENSRGEDCPPV
260 270 280 290 300 310
420
pF1KB5 YRHRKLH
>>XP_016883727 (OMIM: 604066) PREDICTED: beta-1,3-galact (310 aa)
initn: 753 init1: 344 opt: 749 Z-score: 926.5 bits: 180.0 E(85289): 7.2e-45
Smith-Waterman score: 749; 41.5% identity (70.8% similar) in 260 aa overlap (146-405:52-307)
120 130 140 150 160 170
pF1KB5 LSANGSIYNEKGTGHPNSYHFKYIINEPEKCQEKSPFLILLIAAEPGQIEARRAIRQTWG
:.. :::.::... :. : :::::::
XP_016 YFSMYSLNPFKEQSFVYKKDGNFLKLPDTDCRQTPPFLVLLVTSSHKQLAERMAIRQTWG
30 40 50 60 70 80
180 190 200 210 220 230
pF1KB5 NESLAPGIQITRIFLLGLSIKLNGYLQRAILEESRQYHDIIQQEYLDTYYNLTIKTLMGM
.: .. : :. .:::: . .. . . .::... ::::...::.:::::.::.::.
XP_016 KERMVKGKQLKTFFLLGTTS--SAAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGI
90 100 110 120 130
240 250 260 270 280 290
pF1KB5 NWVATYCPHIPYVMKTDSDMFVNTEYLINKLLKPDLPPRHNYFTGYLMRGYAPNRNKDSK
.:: .::. .:::::::::.:..:: . ::: . : .:::.: . : :. ::
XP_016 EWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTR--FFTGFLKLNEFPIRQPFSK
140 150 160 170 180 190
300 310 320 330 340 350
pF1KB5 WYMPPDLYPSERYPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLEDVYVGICLAKLRIDP
:.. . :: .::: ::::::::::::.: ....:: .. ..::::.::.:: .: :
XP_016 WFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNIRL
200 210 220 230 240 250
360 370 380 390 400 410
pF1KB5 VPPPNEFVFNHWRVSYSSCKYSHLITSHQFQPSELIKYWNHLQQNKHNACANAAKEKAGR
.. .: . .: : . .... : ..: :. ::. :.... . :
XP_016 EELHSQPTFFPGGLRFSVCLFRRIVACHFIKPRTLLDYWQALENSRGEDCPPV
260 270 280 290 300 310
420
pF1KB5 YRHRKLH
422 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:49:52 2016 done: Sat Nov 5 12:49:54 2016
Total Scan time: 7.680 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]