Result of FASTA (ccds) for
pF1KB5451
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5451, 372 aa
1>>>pF1KB5451 372 - 372 aa - 372 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8557+/-0.000901; mu= 10.4872+/- 0.055
mean_var=123.0722+/-23.569, 0's: 0 Z-trim(110.3): 43 B-trim: 0 in 0/51
Lambda= 0.115610
statistics sampled from 11456 (11499) to 11456 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.714), E-opt: 0.2 (0.353), width: 16
Scan time: 3.150
The best scores are: opt bits E(32554)
CCDS7296.1 H2AFY2 gene_id:55506|Hs108|chr10 ( 372) 2370 406.2 2.4e-113
CCDS4185.1 H2AFY gene_id:9555|Hs108|chr5 ( 372) 1639 284.3 1.2e-76
CCDS4183.1 H2AFY gene_id:9555|Hs108|chr5 ( 371) 1634 283.4 2.1e-76
CCDS4184.1 H2AFY gene_id:9555|Hs108|chr5 ( 369) 1587 275.6 4.9e-74
CCDS8410.1 H2AFX gene_id:3014|Hs108|chr11 ( 143) 503 94.5 6.2e-20
CCDS938.1 HIST2H2AB gene_id:317772|Hs108|chr1 ( 130) 493 92.8 1.8e-19
CCDS4562.1 HIST1H2AA gene_id:221613|Hs108|chr6 ( 131) 491 92.5 2.3e-19
CCDS937.1 HIST2H2AC gene_id:8338|Hs108|chr1 ( 129) 490 92.3 2.6e-19
CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1 ( 130) 490 92.3 2.6e-19
CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1 ( 130) 490 92.3 2.6e-19
CCDS1573.1 HIST3H2A gene_id:92815|Hs108|chr1 ( 130) 486 91.6 4.1e-19
CCDS4585.1 HIST1H2AC gene_id:8334|Hs108|chr6 ( 130) 485 91.5 4.6e-19
CCDS4628.1 HIST1H2AJ gene_id:8331|Hs108|chr6 ( 128) 484 91.3 5.1e-19
CCDS4591.1 HIST1H2AD gene_id:3013|Hs108|chr6 ( 130) 484 91.3 5.1e-19
CCDS4622.1 HIST1H2AH gene_id:85235|Hs108|chr6 ( 128) 483 91.1 5.7e-19
CCDS31752.1 H2AFJ gene_id:55766|Hs108|chr12 ( 129) 483 91.1 5.7e-19
CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6 ( 130) 483 91.1 5.8e-19
CCDS4574.1 HIST1H2AB gene_id:8335|Hs108|chr6 ( 130) 483 91.1 5.8e-19
CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6 ( 130) 483 91.1 5.8e-19
CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6 ( 130) 483 91.1 5.8e-19
CCDS4595.1 HIST1H2AE gene_id:3012|Hs108|chr6 ( 130) 483 91.1 5.8e-19
CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6 ( 130) 483 91.1 5.8e-19
CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6 ( 130) 483 91.1 5.8e-19
CCDS3654.1 H2AFZ gene_id:3015|Hs108|chr4 ( 128) 393 76.1 1.9e-14
CCDS5496.1 H2AFV gene_id:94239|Hs108|chr7 ( 128) 389 75.5 3e-14
CCDS5497.1 H2AFV gene_id:94239|Hs108|chr7 ( 102) 334 66.2 1.4e-11
CCDS5495.1 H2AFV gene_id:94239|Hs108|chr7 ( 114) 332 65.9 2e-11
>>CCDS7296.1 H2AFY2 gene_id:55506|Hs108|chr10 (372 aa)
initn: 2370 init1: 2370 opt: 2370 Z-score: 2148.4 bits: 406.2 E(32554): 2.4e-113
Smith-Waterman score: 2370; 100.0% identity (100.0% similar) in 372 aa overlap (1-372:1-372)
10 20 30 40 50 60
pF1KB5 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG
310 320 330 340 350 360
370
pF1KB5 IYVQEMAKLDAK
::::::::::::
CCDS72 IYVQEMAKLDAK
370
>>CCDS4185.1 H2AFY gene_id:9555|Hs108|chr5 (372 aa)
initn: 1639 init1: 1639 opt: 1639 Z-score: 1489.5 bits: 284.3 E(32554): 1.2e-76
Smith-Waterman score: 1639; 67.9% identity (89.2% similar) in 371 aa overlap (1-371:1-371)
10 20 30 40 50 60
pF1KB5 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI
::.:.:::: .: ::::.:::::::::..::.::: ::::.::::::::::.:::.:::
CCDS41 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT
:::::::::::::.:..:::::::::::::::::::::::::::::: :::::::::::.
CCDS41 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG
::: :.:..::: :.... .. : .::. . : ..:.: . .: ....::.: :.
CCDS41 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE
::::.::.::: :::::.: .:.::......::.:..::.:.::::.:.:..::: ::::
CCDS41 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA
:.:.: ::::..:::::: :::: . :: :::::::. : ::.::::: ::.:.::::.
CCDS41 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG
:.::::::.::: . :::: ::::::::. :::::..: .. .::.:.:::.::::::::
CCDS41 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
310 320 330 340 350 360
370
pF1KB5 IYVQEMAKLDAK
:::::::::::
CCDS41 IYVQEMAKLDAN
370
>>CCDS4183.1 H2AFY gene_id:9555|Hs108|chr5 (371 aa)
initn: 941 init1: 941 opt: 1634 Z-score: 1485.0 bits: 283.4 E(32554): 2.1e-76
Smith-Waterman score: 1634; 68.5% identity (89.2% similar) in 371 aa overlap (1-371:1-370)
10 20 30 40 50 60
pF1KB5 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI
::.:.:::: .: ::::.:::::::::..::.::: ::::.::::::::::.:::.:::
CCDS41 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT
:::::::::::::.:..:::::::::::::::::::::::::::::: :::::::::::.
CCDS41 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG
::: :.:..::: :.. :. : :: .:. ..: . :..: . .: ....::.: :.
CCDS41 KGKLEAIITPPPAKKA-KSPSQKKPVSKKAGGKKGARKSKKQGEVSKAASADSTTEGTPA
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE
::::.::.::: :::::.: .:.::......::.:..::.:.::::.:.:..::: ::::
CCDS41 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA
:.:.: ::::..:::::: :::: . :: :::::::. : ::.::::: ::.:.::::.
CCDS41 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG
:.::::::.::: . :::: ::::::::. :::::..: .. .::.:.:::.::::::::
CCDS41 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
300 310 320 330 340 350
370
pF1KB5 IYVQEMAKLDAK
:::::::::::
CCDS41 IYVQEMAKLDAN
360 370
>>CCDS4184.1 H2AFY gene_id:9555|Hs108|chr5 (369 aa)
initn: 902 init1: 902 opt: 1587 Z-score: 1442.7 bits: 275.6 E(32554): 4.9e-74
Smith-Waterman score: 1587; 66.3% identity (87.3% similar) in 371 aa overlap (1-371:1-368)
10 20 30 40 50 60
pF1KB5 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI
::.:.:::: .: ::::.:::::::::..::.::: ::::.::::::::::.:::.:::
CCDS41 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT
:::::::::::::.:..:::::::::::::::::::::::::::::: :::::::::::.
CCDS41 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG
::: :.:..::: :.... .. : .::. . : ..:.: . .: ....::.: :.
CCDS41 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE
::::.::.::: :::::...:.::. : : ...::::.... . ..:..::: ::::
CCDS41 DGFTVLSTKSLFLGQKLQVVQADIASIDS---DAVVHPTNTDFYIGGEVGNTLEKKGGKE
190 200 210 220 230
250 260 270 280 290 300
pF1KB5 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA
:.:.: ::::..:::::: :::: . :: :::::::. : ::.::::: ::.:.::::.
CCDS41 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG
:.::::::.::: . :::: ::::::::. :::::..: .. .::.:.:::.::::::::
CCDS41 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
300 310 320 330 340 350
370
pF1KB5 IYVQEMAKLDAK
:::::::::::
CCDS41 IYVQEMAKLDAN
360
>>CCDS8410.1 H2AFX gene_id:3014|Hs108|chr11 (143 aa)
initn: 497 init1: 479 opt: 503 Z-score: 471.4 bits: 94.5 E(32554): 6.2e-20
Smith-Waterman score: 503; 58.5% identity (77.6% similar) in 147 aa overlap (1-144:1-141)
10 20 30 40 50
pF1KB5 MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA
::::. :: . . :::.:::. :::::. : :.:: . :...:::::.:::.:::.
CCDS84 MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK
::::::::::::::::.:: :::. ::. ::::::.:: :::::.::::: :. :: ::
CCDS84 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 RGTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSED
: :. .: . :.:::....
CCDS84 T-----SATV-GPKAPSGGKKATQASQEY
130 140
>>CCDS938.1 HIST2H2AB gene_id:317772|Hs108|chr1 (130 aa)
initn: 502 init1: 483 opt: 493 Z-score: 463.0 bits: 92.8 E(32554): 1.8e-19
Smith-Waterman score: 493; 66.7% identity (83.3% similar) in 120 aa overlap (1-117:1-120)
10 20 30 40 50
pF1KB5 MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA
::::. :: . . :::.:::. :::::. : :.::.. :...:::::.:::.:::.
CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK
::::::::::::::::.:: :::. ::: ::::::.:: :::::.::::: :. :: ::
CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 RGTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSED
CCDS93 TESHKPGKNK
130
>>CCDS4562.1 HIST1H2AA gene_id:221613|Hs108|chr6 (131 aa)
initn: 481 init1: 481 opt: 491 Z-score: 461.1 bits: 92.5 E(32554): 2.3e-19
Smith-Waterman score: 491; 65.8% identity (84.2% similar) in 120 aa overlap (1-117:1-120)
10 20 30 40 50
pF1KB5 MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA
::::. :: . .. :::.:::. :::::. : :.::.. ::..:::::.:::.:::.
CCDS45 MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK
::::::::::.:::::.:: :::. ::. ::::::.:: :::::.::::: :. :: ::
CCDS45 AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 RGTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSED
CCDS45 TESHHHKAQSK
130
>>CCDS937.1 HIST2H2AC gene_id:8338|Hs108|chr1 (129 aa)
initn: 476 init1: 476 opt: 490 Z-score: 460.3 bits: 92.3 E(32554): 2.6e-19
Smith-Waterman score: 490; 63.6% identity (81.4% similar) in 129 aa overlap (1-125:1-129)
10 20 30 40 50
pF1KB5 MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA
::::. :: . . :::.:::. :::::. : :.::.. :...:::::::::.:::.
CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK
::::::::::::::::.:: :::. ::. ::::::.:: ::::.::::: :. :: ::
CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 RGT-KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSE
. :.::.
CCDS93 TESHKAKSK
>>CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1 (130 aa)
initn: 479 init1: 479 opt: 490 Z-score: 460.3 bits: 92.3 E(32554): 2.6e-19
Smith-Waterman score: 490; 62.5% identity (81.2% similar) in 128 aa overlap (1-125:1-128)
10 20 30 40 50
pF1KB5 MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA
::::. :: . . :::.:::. :::::. : :.::.. :...:::::::::.:::.
CCDS30 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK
::::::::::::::::.:: :::. ::. ::::::.:: ::::.::::: :. :: ::
CCDS30 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 RGTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSED
.. :..
CCDS30 TESHHKAKGK
130
>>CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1 (130 aa)
initn: 479 init1: 479 opt: 490 Z-score: 460.3 bits: 92.3 E(32554): 2.6e-19
Smith-Waterman score: 490; 62.5% identity (81.2% similar) in 128 aa overlap (1-125:1-128)
10 20 30 40 50
pF1KB5 MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA
::::. :: . . :::.:::. :::::. : :.::.. :...:::::::::.:::.
CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK
::::::::::::::::.:: :::. ::. ::::::.:: ::::.::::: :. :: ::
CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 RGTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSED
.. :..
CCDS93 TESHHKAKGK
130
372 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:49:14 2016 done: Sat Nov 5 12:49:14 2016
Total Scan time: 3.150 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]