Result of FASTA (omim) for
pF1KB5446
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5446, 655 aa
1>>>pF1KB5446 655 - 655 aa - 655 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2198+/-0.000409; mu= 20.6917+/- 0.025
mean_var=76.1993+/-15.709, 0's: 0 Z-trim(111.7): 58 B-trim: 59 in 1/49
Lambda= 0.146926
statistics sampled from 20312 (20370) to 20312 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.601), E-opt: 0.2 (0.239), width: 16
Scan time: 7.980
The best scores are: opt bits E(85289)
NP_000009 (OMIM: 201475,609575) very long-chain sp ( 655) 4259 912.8 0
NP_001257376 (OMIM: 201475,609575) very long-chain ( 678) 4133 886.1 0
XP_006721579 (OMIM: 201475,609575) PREDICTED: very ( 662) 4103 879.8 0
NP_001029031 (OMIM: 201475,609575) very long-chain ( 633) 3829 821.7 0
NP_001257377 (OMIM: 201475,609575) very long-chain ( 579) 3768 808.7 0
XP_011522132 (OMIM: 201475,609575) PREDICTED: very ( 621) 3120 671.4 2.7e-192
XP_011522131 (OMIM: 201475,609575) PREDICTED: very ( 628) 3120 671.4 2.8e-192
NP_054768 (OMIM: 611103,611126) acyl-CoA dehydroge ( 621) 1697 369.7 1.7e-101
XP_016861753 (OMIM: 611103,611126) PREDICTED: acyl ( 537) 1410 308.9 3.2e-83
XP_016877645 (OMIM: 243500,607036) PREDICTED: isov ( 407) 724 163.4 1.5e-39
NP_002216 (OMIM: 243500,607036) isovaleryl-CoA deh ( 426) 717 161.9 4.4e-39
NP_000008 (OMIM: 201470,606885) short-chain specif ( 412) 714 161.2 6.7e-39
NP_001152980 (OMIM: 243500,607036) isovaleryl-CoA ( 396) 712 160.8 8.7e-39
NP_001600 (OMIM: 600301,610006) short/branched cha ( 432) 710 160.4 1.2e-38
XP_016877643 (OMIM: 243500,607036) PREDICTED: isov ( 436) 702 158.7 4.1e-38
XP_016877641 (OMIM: 243500,607036) PREDICTED: isov ( 455) 702 158.7 4.2e-38
NP_001317103 (OMIM: 600301,610006) short/branched ( 330) 674 152.7 2e-36
XP_006720555 (OMIM: 243500,607036) PREDICTED: isov ( 447) 648 147.3 1.2e-34
XP_005254407 (OMIM: 243500,607036) PREDICTED: isov ( 487) 641 145.8 3.5e-34
NP_001272971 (OMIM: 201450,607008) medium-chain sp ( 385) 633 144.0 9.3e-34
NP_000007 (OMIM: 201450,607008) medium-chain speci ( 421) 633 144.1 1e-33
NP_001120800 (OMIM: 201450,607008) medium-chain sp ( 425) 633 144.1 1e-33
XP_016877640 (OMIM: 243500,607036) PREDICTED: isov ( 476) 633 144.1 1.1e-33
XP_016877638 (OMIM: 243500,607036) PREDICTED: isov ( 516) 626 142.7 3.3e-33
XP_016877639 (OMIM: 243500,607036) PREDICTED: isov ( 478) 623 142.0 4.8e-33
XP_016877644 (OMIM: 243500,607036) PREDICTED: isov ( 418) 617 140.7 1e-32
XP_016877642 (OMIM: 243500,607036) PREDICTED: isov ( 447) 617 140.7 1.1e-32
NP_001272972 (OMIM: 201450,607008) medium-chain sp ( 454) 611 139.4 2.7e-32
XP_016861754 (OMIM: 611103,611126) PREDICTED: acyl ( 340) 588 134.5 6.3e-31
XP_016873036 (OMIM: 604773,611283) PREDICTED: isob ( 317) 576 131.9 3.5e-30
XP_006720558 (OMIM: 243500,607036) PREDICTED: isov ( 347) 576 131.9 3.7e-30
NP_055199 (OMIM: 604773,611283) isobutyryl-CoA deh ( 415) 576 132.0 4.3e-30
XP_005246574 (OMIM: 609576) PREDICTED: long-chain ( 409) 565 129.7 2.1e-29
NP_001599 (OMIM: 609576) long-chain specific acyl- ( 430) 565 129.7 2.2e-29
XP_016877646 (OMIM: 243500,607036) PREDICTED: isov ( 376) 561 128.8 3.6e-29
XP_016873035 (OMIM: 604773,611283) PREDICTED: isob ( 353) 551 126.6 1.5e-28
XP_016873031 (OMIM: 604773,611283) PREDICTED: isob ( 451) 551 126.7 1.8e-28
XP_011541052 (OMIM: 604773,611283) PREDICTED: isob ( 451) 551 126.7 1.8e-28
XP_016873032 (OMIM: 604773,611283) PREDICTED: isob ( 434) 539 124.2 1e-27
XP_016859444 (OMIM: 609576) PREDICTED: long-chain ( 289) 505 116.8 1.1e-25
NP_001289483 (OMIM: 201470,606885) short-chain spe ( 408) 481 111.8 4.9e-24
XP_016877647 (OMIM: 243500,607036) PREDICTED: isov ( 308) 466 108.6 3.6e-23
XP_016873034 (OMIM: 604773,611283) PREDICTED: isob ( 391) 446 104.4 8.1e-22
XP_016873033 (OMIM: 604773,611283) PREDICTED: isob ( 391) 446 104.4 8.1e-22
NP_001272973 (OMIM: 201450,607008) medium-chain sp ( 232) 436 102.1 2.4e-21
XP_005271562 (OMIM: 604773,611283) PREDICTED: isob ( 249) 342 82.2 2.5e-15
XP_016873038 (OMIM: 604773,611283) PREDICTED: isob ( 249) 342 82.2 2.5e-15
XP_016873037 (OMIM: 604773,611283) PREDICTED: isob ( 268) 340 81.8 3.5e-15
NP_115545 (OMIM: 614288) acyl-CoA dehydrogenase fa ( 780) 339 82.0 9.2e-15
NP_079523 (OMIM: 611181) acyl-CoA dehydrogenase fa (1059) 339 82.1 1.2e-14
>>NP_000009 (OMIM: 201475,609575) very long-chain specif (655 aa)
initn: 4259 init1: 4259 opt: 4259 Z-score: 4877.7 bits: 912.8 E(85289): 0
Smith-Waterman score: 4259; 100.0% identity (100.0% similar) in 655 aa overlap (1-655:1-655)
10 20 30 40 50 60
pF1KB5 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
550 560 570 580 590 600
610 620 630 640 650
pF1KB5 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
610 620 630 640 650
>>NP_001257376 (OMIM: 201475,609575) very long-chain spe (678 aa)
initn: 4133 init1: 4133 opt: 4133 Z-score: 4733.1 bits: 886.1 E(85289): 0
Smith-Waterman score: 4133; 100.0% identity (100.0% similar) in 635 aa overlap (21-655:44-678)
10 20 30 40 50
pF1KB5 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALD
::::::::::::::::::::::::::::::
NP_001 MGKEIEAEAQRPLRQTWRPGQPPAMTAKTMSSRLTALLGQPRPGPARRPYAGGAAQLALD
20 30 40 50 60 70
60 70 80 90 100 110
pF1KB5 KSDSHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSDSHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVS
80 90 100 110 120 130
120 130 140 150 160 170
pF1KB5 RFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMH
140 150 160 170 180 190
180 190 200 210 220 230
pF1KB5 DLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRT
200 210 220 230 240 250
240 250 260 270 280 290
pF1KB5 SAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGG
260 270 280 290 300 310
300 310 320 330 340 350
pF1KB5 ITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAG
320 330 340 350 360 370
360 370 380 390 400 410
pF1KB5 TMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATD
380 390 400 410 420 430
420 430 440 450 460 470
pF1KB5 FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRL
440 450 460 470 480 490
480 490 500 510 520 530
pF1KB5 FVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELS
500 510 520 530 540 550
540 550 560 570 580 590
pF1KB5 RSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLS
560 570 580 590 600 610
600 610 620 630 640 650
pF1KB5 EGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTS
620 630 640 650 660 670
pF1KB5 NPLGF
:::::
NP_001 NPLGF
>>XP_006721579 (OMIM: 201475,609575) PREDICTED: very lon (662 aa)
initn: 4109 init1: 3634 opt: 4103 Z-score: 4698.9 bits: 879.8 E(85289): 0
Smith-Waterman score: 4103; 96.1% identity (97.6% similar) in 662 aa overlap (1-655:1-662)
10 20 30 40 50 60
pF1KB5 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
490 500 510 520 530 540
550 560 570 580 590
pF1KB5 EQFATVVEAKLIKHKKGIVNEQF---LLQRLADGA----IDLYAMVVVLSRASRSLSEGH
:::::::::::::::::::.:. :.: . : ..: ... .::::::::::
XP_006 EQFATVVEAKLIKHKKGIVSEEAGRECLSRRGPGPGSQPAQIYFHLLLPARASRSLSEGH
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB5 PTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPL
610 620 630 640 650 660
pF1KB5 GF
::
XP_006 GF
>>NP_001029031 (OMIM: 201475,609575) very long-chain spe (633 aa)
initn: 3819 init1: 3819 opt: 3829 Z-score: 4385.3 bits: 821.7 E(85289): 0
Smith-Waterman score: 4065; 96.6% identity (96.6% similar) in 655 aa overlap (1-655:1-633)
10 20 30 40 50 60
pF1KB5 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQ--------------
10 20 30 40
70 80 90 100 110 120
pF1KB5 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 --------ESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
50 60 70 80 90
130 140 150 160 170 180
pF1KB5 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB5 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB5 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB5 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
520 530 540 550 560 570
610 620 630 640 650
pF1KB5 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
580 590 600 610 620 630
>>NP_001257377 (OMIM: 201475,609575) very long-chain spe (579 aa)
initn: 3768 init1: 3768 opt: 3768 Z-score: 4316.0 bits: 808.7 E(85289): 0
Smith-Waterman score: 3768; 100.0% identity (100.0% similar) in 579 aa overlap (77-655:1-579)
50 60 70 80 90 100
pF1KB5 LALDKSDSHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELV
::::::::::::::::::::::::::::::
NP_001 MFKGQLTTDQVFPYPSVLNEEQTQFLKELV
10 20 30
110 120 130 140 150 160
pF1KB5 EPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEI
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB5 VGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAA
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB5 SIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVER
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB5 GFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAA
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB5 ALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQ
280 290 300 310 320 330
410 420 430 440 450 460
pF1KB5 GATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND
340 350 360 370 380 390
470 480 490 500 510 520
pF1KB5 ILRLFVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILRLFVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVH
400 410 420 430 440 450
530 540 550 560 570 580
pF1KB5 PELSRSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PELSRSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRAS
460 470 480 490 500 510
590 600 610 620 630 640
pF1KB5 RSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGG
520 530 540 550 560 570
650
pF1KB5 VVTSNPLGF
:::::::::
NP_001 VVTSNPLGF
>>XP_011522132 (OMIM: 201475,609575) PREDICTED: very lon (621 aa)
initn: 3881 init1: 3120 opt: 3120 Z-score: 3573.2 bits: 671.4 E(85289): 2.7e-192
Smith-Waterman score: 3821; 92.1% identity (93.1% similar) in 655 aa overlap (1-655:1-621)
10 20 30 40 50 60
pF1KB5 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMA-
430 440 450 460 470
490 500 510 520 530 540
pF1KB5 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
:.::.. . . :. .: :::::
XP_011 ----------------------GRAGQRPESQRTCPPGV-----------ESEWRAVRAL
480 490 500
550 560 570 580 590 600
pF1KB5 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQFATVVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEK
510 520 530 540 550 560
610 620 630 640 650
pF1KB5 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
570 580 590 600 610 620
>>XP_011522131 (OMIM: 201475,609575) PREDICTED: very lon (628 aa)
initn: 3731 init1: 3120 opt: 3120 Z-score: 3573.1 bits: 671.4 E(85289): 2.8e-192
Smith-Waterman score: 3665; 88.2% identity (90.8% similar) in 662 aa overlap (1-655:1-628)
10 20 30 40 50 60
pF1KB5 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGAAQLALDKSDSHPSDAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMA-
430 440 450 460 470
490 500 510 520 530 540
pF1KB5 GKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRAL
:.::.. . . :. .: :::::
XP_011 ----------------------GRAGQRPESQRTCPPGV-----------ESEWRAVRAL
480 490 500
550 560 570 580 590
pF1KB5 EQFATVVEAKLIKHKKGIVNEQF---LLQRLADGA----IDLYAMVVVLSRASRSLSEGH
:::::::::::::::::::.:. :.: . : ..: ... .::::::::::
XP_011 EQFATVVEAKLIKHKKGIVSEEAGRECLSRRGPGPGSQPAQIYFHLLLPARASRSLSEGH
510 520 530 540 550 560
600 610 620 630 640 650
pF1KB5 PTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPL
570 580 590 600 610 620
pF1KB5 GF
::
XP_011 GF
>>NP_054768 (OMIM: 611103,611126) acyl-CoA dehydrogenase (621 aa)
initn: 948 init1: 566 opt: 1697 Z-score: 1943.0 bits: 369.7 E(85289): 1.7e-101
Smith-Waterman score: 1697; 46.6% identity (75.0% similar) in 599 aa overlap (60-653:29-617)
30 40 50 60 70 80
pF1KB5 QPRPGPARRPYAGGAAQLALDKSDSHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFP
: : .: ..:: .: :.. .:::
NP_054 MSGCGLFLRTTAAARACRGLVVSTANRRLLRTSP---PVRAFAKELFLGKIKKKEVFP
10 20 30 40 50
90 100 110 120 130 140
pF1KB5 YPSVLNEEQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSE
.: : ..: .. ..... :: .:: : : : : . . : . :: :: :::::: :
NP_054 FPEVSQDELNE-INQFLGPVEKFFTEEVDSRKIDQEGKIPDETLEKLKSLGLFGLQVPEE
60 70 80 90 100 110
150 160 170 180 190 200
pF1KB5 LGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGE
::.:. ::.:.:: ::..: : .. .::.:::.::.:::.: ::. :: ::::::::::
NP_054 YGGLGFSNTMYSRLGEIISM-DGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGE
120 130 140 150 160 170
210 220 230 240 250 260
pF1KB5 TVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTD
.::::::::.:::::::::. :. : :.: :::::.::.:::::.:::::::: :.:
NP_054 HIAAFCLTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVD
180 190 200 210 220 230
270 280 290 300 310 320
pF1KB5 PATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSG
. :.::.:::::.::: :::.:.: :: :.::..::: :: :.....: ::.:::::.:
NP_054 -SDGSVKDKITAFIVERDFGGVTNGKPEDKLGIRGSNTCEVHFENTKIPVENILGEVGDG
240 250 260 270 280 290
330 340 350 360 370 380
pF1KB5 FKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVML
:::::.:::.:::.:....:: .. .: ....: .: ::.... .:::::::.: :..
NP_054 FKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQK
300 310 320 330 340 350
390 400 410 420 430 440
pF1KB5 QYVTESMAYMVSANMDQ-GATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGV
:: :::.:.... .:: : : .::::. :.:.:::::. ..: .::.::.:. ..
NP_054 AYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPY
360 370 380 390 400 410
450 460 470 480 490 500
pF1KB5 ERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQ
::.::: ::. ::::::.:::...:: : . :. :. ::. .... .. .:..
NP_054 ERILRDTRILLIFEGTNEILRMYIALTGLQHAGRILTTRIHELKQ--AKVSTVMDTVGRR
420 430 440 450 460 470
510 520 530 540 550 560
pF1KB5 LRRRAGLGSGLSLSG---LVHPELSRSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLL
:: : :.:.: .::: :. :.. . :. .::. :.. : :..::..:
NP_054 LRDSLGRTVDLGLTGNHGVVHPSLADSANKFEENTYCFGRTVETLLLRFGKTIMEEQLVL
480 490 500 510 520 530
570 580 590 600 610 620
pF1KB5 QRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDP
.:.:. :.::.:..::::::::. : . .:: .: .:.:.:: ... .. : :
NP_054 KRVANILINLYGMTAVLSRASRSIRIGLRNHDHEVLLANTFCVEA--YLQNLFSLSQLDK
540 550 560 570 580
630 640 650
pF1KB5 WQQE-LYRNFKSISKALVERGGVVTSNPLGF
. : : ...:..:. ..:. . . ..::
NP_054 YAPENLDEQIKKVSQQILEKRAYICAHPLDRTC
590 600 610 620
>>XP_016861753 (OMIM: 611103,611126) PREDICTED: acyl-CoA (537 aa)
initn: 718 init1: 566 opt: 1410 Z-score: 1615.1 bits: 308.9 E(85289): 3.2e-83
Smith-Waterman score: 1410; 50.4% identity (78.1% similar) in 452 aa overlap (160-607:2-449)
130 140 150 160 170 180
pF1KB5 ETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGI
:.:: ::..: : .. .::.:::.::.:::
XP_016 MYSRLGEIISM-DGSITVTLAAHQAIGLKGI
10 20 30
190 200 210 220 230 240
pF1KB5 LLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLW
.: ::. :: :::::::::: .::::::::.:::::::::. :. : :.: :::::.:
XP_016 ILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSRATLSEDKKHYILNGSKVW
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB5 ISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAE
:.:::::.:::::::: :.: . :.::.:::::.::: :::.:.: :: :.::..::: :
XP_016 ITNGGLANIFTVFAKTEVVD-SDGSVKDKITAFIVERDFGGVTNGKPEDKLGIRGSNTCE
100 110 120 130 140
310 320 330 340 350 360
pF1KB5 VFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQF
: :.....: ::.:::::.::::::.:::.:::.:....:: .. .: ....: .: ::
XP_016 VHFENTKIPVENILGEVGDGFKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYACTRKQF
150 160 170 180 190 200
370 380 390 400 410 420
pF1KB5 GEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQ-GATDFQIEAAISKIFGSEAAWK
.... .:::::::.: :.. :: :::.:.... .:: : : .::::. :.:.:::::.
XP_016 NKRLSEFGLIQEKFALMAQKAYVMESMTYLTAGMLDQPGFPDCSIEAAMVKVFSSEAAWQ
210 220 230 240 250 260
430 440 450 460 470 480
pF1KB5 VTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLG
..: .::.::.:. .. ::.::: ::. ::::::.:::...:: : . :. :.
XP_016 CVSEALQILGGLGYTRDYPYERILRDTRILLIFEGTNEILRMYIALTGLQHAGRILTTRI
270 280 290 300 310 320
490 500 510 520 530 540
pF1KB5 SALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSG---LVHPELSRSGELAVRALEQFAT
::. .... .. .:..:: : :.:.: .::: :. :.. . :.
XP_016 HELKQ--AKVSTVMDTVGRRLRDSLGRTVDLGLTGNHGVVHPSLADSANKFEENTYCFGR
330 340 350 360 370 380
550 560 570 580 590 600
pF1KB5 VVEAKLIKHKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDT
.::. :.. : :..::..:.:.:. :.::.:..::::::::. : . .::. .
XP_016 TVETLLLRFGKTIMEEQLVLKRVANILINLYGMTAVLSRASRSIRIGLRNHDHEQGTDPA
390 400 410 420 430 440
610 620 630 640 650
pF1KB5 WCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVERGGVVTSNPLGF
:
XP_016 HCPLCWREAGAVSEDPLYTRISACTFQSTCRYQDCDICLSEETGSEMLSHLLLGKGCWIR
450 460 470 480 490 500
>>XP_016877645 (OMIM: 243500,607036) PREDICTED: isovaler (407 aa)
initn: 708 init1: 261 opt: 724 Z-score: 830.9 bits: 163.4 E(85289): 1.5e-39
Smith-Waterman score: 724; 32.2% identity (68.4% similar) in 395 aa overlap (79-472:17-398)
50 60 70 80 90 100
pF1KB5 LDKSDSHPSDALTRKKPAKAESKSFAVGMFKG-QLTTDQVFPYPSVLNEEQTQFLKELVE
:: : . ... : . : . ...::.: .
XP_016 MVFWWRIGQATYRLWHKGPQSVCSSLTPEQAELRQTMAKFLQEHLA
10 20 30 40
110 120 130 140 150 160
pF1KB5 PVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIV
: . .:.. ... .. ..: :. : .::..:. .: . :: :: ... ..: .
XP_016 PKA---QEID---RSNEFKNLREF-WKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEI
50 60 70 80 90
170 180 190 200 210 220
pF1KB5 GMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAAS
. . .::.. :::... .. .. :..:::::::::: ::: ..:. ..::..:::..:
XP_016 SRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVS
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB5 IRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERG
.. .: . :..: :::.:.::.:: ::.. :.::: : :. ... ::::.::.:
XP_016 MKLKAEKK--GNHYILNGNKFWITNGPDADVLIVYAKT---DLAAVPASRGITAFIVEKG
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB5 FGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAA
. :.. . :.:...::: :..:. ..:. :.::. ..: : : :. :. .:..
XP_016 MPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGG
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB5 LAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQG
: :.... ... . : ::.:: .: :.: :.: : .. ....: :. :.:
XP_016 PLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEG
280 290 300 310 320 330
410 420 430 440 450 460
pF1KB5 ATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDI
. :.. ....: : .:. . :: .:: :.... . : ::: ....: ::...
XP_016 HCTAKDCAGVI-LYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEV
340 350 360 370 380 390
470 480 490 500 510 520
pF1KB5 LRLFVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHP
:: .
XP_016 RRLVIGRAFNADFH
400
655 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 07:16:21 2016 done: Sat Nov 5 07:16:22 2016
Total Scan time: 7.980 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]