FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5440, 327 aa
1>>>pF1KB5440 327 - 327 aa - 327 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6729+/-0.000636; mu= 15.8750+/- 0.039
mean_var=87.6984+/-17.248, 0's: 0 Z-trim(113.2): 11 B-trim: 0 in 0/53
Lambda= 0.136955
statistics sampled from 13848 (13859) to 13848 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.426), width: 16
Scan time: 2.710
The best scores are: opt bits E(32554)
CCDS4429.1 B4GALT7 gene_id:11285|Hs108|chr5 ( 327) 2315 466.6 1.2e-131
CCDS82245.1 B4GALT6 gene_id:9331|Hs108|chr18 ( 343) 433 94.7 1.1e-19
CCDS11900.1 B4GALT6 gene_id:9331|Hs108|chr18 ( 382) 433 94.7 1.2e-19
CCDS6535.1 B4GALT1 gene_id:2683|Hs108|chr9 ( 398) 430 94.2 1.9e-19
CCDS13420.1 B4GALT5 gene_id:9334|Hs108|chr20 ( 388) 426 93.4 3.2e-19
CCDS1222.1 B4GALT3 gene_id:8703|Hs108|chr1 ( 393) 405 89.2 5.8e-18
CCDS2986.1 B4GALT4 gene_id:8702|Hs108|chr3 ( 344) 396 87.4 1.8e-17
CCDS506.1 B4GALT2 gene_id:8704|Hs108|chr1 ( 372) 387 85.7 6.5e-17
CCDS55596.1 B4GALT2 gene_id:8704|Hs108|chr1 ( 401) 387 85.7 6.9e-17
>>CCDS4429.1 B4GALT7 gene_id:11285|Hs108|chr5 (327 aa)
initn: 2315 init1: 2315 opt: 2315 Z-score: 2476.7 bits: 466.6 E(32554): 1.2e-131
Smith-Waterman score: 2315; 100.0% identity (100.0% similar) in 327 aa overlap (1-327:1-327)
10 20 30 40 50 60
pF1KB5 MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 GPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 QLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTAL
250 260 270 280 290 300
310 320
pF1KB5 SVGGAPCTVLNIMLDCDKTATPWCTFS
:::::::::::::::::::::::::::
CCDS44 SVGGAPCTVLNIMLDCDKTATPWCTFS
310 320
>>CCDS82245.1 B4GALT6 gene_id:9331|Hs108|chr18 (343 aa)
initn: 404 init1: 202 opt: 433 Z-score: 466.7 bits: 94.7 E(32554): 1.1e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:104-316)
50 60 70 80 90 100
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
: ::. ..:::.:::.: :.:
CCDS82 PYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
.: :. .:...... .::..:. :::: :.:::: :. ... : . .:::: :
CCDS82 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
140 150 160 170 180 190
170 180 190 200 210 220
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
: :.. :: : : : :. . .: :: . ::. :. ...: ::. : :::::
CCDS82 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
200 210 220 230 240 250
230 240 250 260 270 280
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
:::... :.. :: .. :: : ::.. : : . . .. ..:. .:
CCDS82 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
260 270 280 290 300
290 300 310 320
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
:::.. :
CCDS82 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY
310 320 330 340
>>CCDS11900.1 B4GALT6 gene_id:9331|Hs108|chr18 (382 aa)
initn: 404 init1: 202 opt: 433 Z-score: 466.1 bits: 94.7 E(32554): 1.2e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:143-355)
50 60 70 80 90 100
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
: ::. ..:::.:::.: :.:
CCDS11 PYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
120 130 140 150 160 170
110 120 130 140 150 160
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
.: :. .:...... .::..:. :::: :.:::: :. ... : . .:::: :
CCDS11 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
180 190 200 210 220 230
170 180 190 200 210 220
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
: :.. :: : : : :. . .: :: . ::. :. ...: ::. : :::::
CCDS11 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
240 250 260 270 280 290
230 240 250 260 270 280
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
:::... :.. :: .. :: : ::.. : : . . .. ..:. .:
CCDS11 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
300 310 320 330 340
290 300 310 320
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
:::.. :
CCDS11 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY
350 360 370 380
>>CCDS6535.1 B4GALT1 gene_id:2683|Hs108|chr9 (398 aa)
initn: 398 init1: 193 opt: 430 Z-score: 462.6 bits: 94.2 E(32554): 1.9e-19
Smith-Waterman score: 430; 35.1% identity (64.9% similar) in 208 aa overlap (92-294:175-378)
70 80 90 100 110 120
pF1KB5 RGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSR
::..:...:::.: :.: .. ... :.:
CCDS65 FNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQR
150 160 170 180 190 200
130 140 150 160 170
pF1KB5 KKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDY--IAMHDVDLLPLNEELDYG-FP
... . :::.::. :::: :.:::: :. .. :: ... ::::.:.:.. : :
CCDS65 QQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFS
210 220 230 240 250 260
180 190 200 210 220 230
pF1KB5 EAGPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGA
. . :: .. : : ::. ::::.. ::. : .:::: :::... :.
CCDS65 QPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFR
270 280 290 300 310 320
240 250 260 270 280 290
pF1KB5 GLQLFRPSGITTGYKTFRHLHDPAWRKRDQK--RIAAQKQEQFKVDREGGLNTVKYHVAS
:... ::.... . .:: .: . :. ::: :. ... :::.. :.:
CCDS65 GMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLS----DGLNSLTYQVLD
330 340 350 360 370 380
300 310 320
pF1KB5 RTALSVGGAPCTVLNIMLDCDKTATPWCTFS
CCDS65 VQRYPLYTQITVDIGTPS
390
>>CCDS13420.1 B4GALT5 gene_id:9334|Hs108|chr20 (388 aa)
initn: 402 init1: 207 opt: 426 Z-score: 458.5 bits: 93.4 E(32554): 3.2e-19
Smith-Waterman score: 426; 34.1% identity (63.1% similar) in 214 aa overlap (83-292:152-361)
60 70 80 90 100 110
pF1KB5 CSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFV
::. . ..:.:.:::.: :.: :.
CCDS13 KGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVLF
130 140 150 160 170 180
120 130 140 150 160 170
pF1KB5 PHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDY--IAMHDVDLLPLN
:. .:.:.... .::..:: :::: :.:::: :. .. :. . .:::: .: .
CCDS13 RHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPES
190 200 210 220 230 240
180 190 200 210 220
pF1KB5 EELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWGRED
.. :: . : : :. . .: : . ::. :. ...: ::. : ::::: ::
CCDS13 DRNYYGCGQM-PRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
250 260 270 280 290 300
230 240 250 260 270 280
pF1KB5 DEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLN
:... :...:: .. :: : : ::.. : : . . . ...:. .: :::
CCDS13 DDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLD---GLN
310 320 330 340 350
290 300 310 320
pF1KB5 TVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
...:
CCDS13 NLNYFANITYDALYKNITVNLTPELAQVNEY
360 370 380
>>CCDS1222.1 B4GALT3 gene_id:8703|Hs108|chr1 (393 aa)
initn: 405 init1: 183 opt: 405 Z-score: 436.0 bits: 89.2 E(32554): 5.8e-18
Smith-Waterman score: 405; 34.0% identity (62.7% similar) in 209 aa overlap (94-297:124-329)
70 80 90 100 110 120
pF1KB5 QGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKK
: :..:: : : ..: ... :.. ::.:..
CCDS12 PVPSLAEIVERNPRVEPGGRYRPAGCEPRSRTAIIVPHRAREHHLRLLLYHLHPFLQRQQ
100 110 120 130 140 150
130 140 150 160 170 180
pF1KB5 IRHHIYVLNQVDHFRFNRAALINVGFLES--SNSTDYIAMHDVDLLPLNEELDYGFPEAG
. . :::..:. . :::: :.::: :. .. : . .::::::: :.. : :
CCDS12 LAYGIYVIHQAGNGTFNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRG
160 170 180 190 200 210
190 200 210 220 230
pF1KB5 PFHVASPELHPLYH--YKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAG
: ::: . : : : ::. :. ..: ::. :..:::: :::.. :.. ::
CCDS12 PRHVAVAMNKFGYSLPYPQYFGGVSALTPDQYLKMNGFPNEYWGWGGEDDDIATRVRLAG
220 230 240 250 260 270
240 250 260 270 280 290
pF1KB5 LQLFRPSGITTGYKTFRHLHDPAWRKRDQK-RIAAQKQEQFKVDREGGLNTVKYHVASRT
... :: . :: .: : . .. .. . .. :... : :.:.. :.. .:
CCDS12 MKISRPPTSVGHYKMVKHRGDKGNEENPHRFDLLVRTQNSWTQD---GMNSLTYQLLARE
280 290 300 310 320 330
300 310 320
pF1KB5 ALSVGGAPCTVLNIMLDCDKTATPWCTFS
CCDS12 LGPLYTNITADIGTDPRGPRAPSGPRYPPGSSQAFRQEMLQRRPPARPGPLSTANHTALR
340 350 360 370 380 390
>>CCDS2986.1 B4GALT4 gene_id:8702|Hs108|chr3 (344 aa)
initn: 374 init1: 187 opt: 396 Z-score: 427.2 bits: 87.4 E(32554): 1.8e-17
Smith-Waterman score: 396; 30.2% identity (61.2% similar) in 258 aa overlap (49-296:72-326)
20 30 40 50 60 70
pF1KB5 GLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARAVRGQGQETSGPP------
..:. .:. .:::.. :
CCDS29 PKAKEFMANFHKTLILGKGKTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEV
50 60 70 80 90 100
80 90 100 110 120 130
pF1KB5 RACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLN
.: :. ... . . .:.:.::: :.: ..:. .. :.. ::.:... . :::..
CCDS29 QAENPKVSRGRYRPQECKALQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIH
110 120 130 140 150 160
140 150 160 170 180 190
pF1KB5 QVDHFRFNRAALINVGFLES--SNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPEL
:.. .:::: :.:::.::. .. : . .:::::.: :. : : : :.. .
CCDS29 QAEGKKFNRAKLLNVGYLEALKEENWDCFIFHDVDLVPENDFNLYKCEEH-PKHLVVGRN
170 180 190 200 210 220
200 210 220 230 240
pF1KB5 HPLYH--YKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGI
:. :. : ::. ::.... ::.:: .:::: :::.. :.. ... ::
CCDS29 STGYRLRYSGYFGGVTALSREQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPE
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB5 TTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGGAPCT
. : : .: . . . .:. .: . .: : ::.. .:...:
CCDS29 VGKYTMVFHTRDKG-NEVNAERMKLLHQVS-RVWRTDGLSSCSYKLVSVEHNPLYINITV
290 300 310 320 330
310 320
pF1KB5 VLNIMLDCDKTATPWCTFS
CCDS29 DFWFGA
340
>>CCDS506.1 B4GALT2 gene_id:8704|Hs108|chr1 (372 aa)
initn: 364 init1: 183 opt: 387 Z-score: 417.1 bits: 85.7 E(32554): 6.5e-17
Smith-Waterman score: 389; 29.4% identity (58.8% similar) in 289 aa overlap (42-323:103-368)
20 30 40 50 60 70
pF1KB5 PWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARAVR-GQGQETSG
:. . : .... . :. : . : .:
CCDS50 TASSSGLPEVPSALPGPTAPTLPPCPDSPPGLVGRLLIEFTSPMPLERVQRENPGVLMGG
80 90 100 110 120 130
80 90 100 110 120 130
pF1KB5 PPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYV
: ::. : . .::..:::.: ..: .. ... .: :...:. .::
CCDS50 --RYTPPDCTPAQ----------TVAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGVYV
140 150 160 170 180
140 150 160 170 180
pF1KB5 LNQVDHFRFNRAALINVGFLES---SNSTDYIAMHDVDLLPLNEELDYGFPEAGPFH--V
.:: . :::: :.::::::. . . : . . ::::.:.... : . : : .
CCDS50 INQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQ-PRHFAI
190 200 210 220 230
190 200 210 220 230 240
pF1KB5 ASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRP
: .. : : ::. ::: .. ::. :..:::: :::... ::. .:... ::
CCDS50 AMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRP
240 250 260 270 280 290
250 260 270 280 290 300
pF1KB5 SGITTG-YKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGG
. : : :. ..: .: . . .:.. .. .. . :.: ...:.:.: : :.
CCDS50 D-IRIGRYRMIKHDRDKH-NEPNPQRFTKIQNTKLTMKRDG-IGSVRYQV-----LEVSR
300 310 320 330 340 350
310 320
pF1KB5 APCTVLNIMLDCDKTATPWCTFS
: :: .: . . :
CCDS50 QP-LFTNITVDIGRPPS-WPPRG
360 370
>>CCDS55596.1 B4GALT2 gene_id:8704|Hs108|chr1 (401 aa)
initn: 364 init1: 183 opt: 387 Z-score: 416.6 bits: 85.7 E(32554): 6.9e-17
Smith-Waterman score: 389; 29.4% identity (58.8% similar) in 289 aa overlap (42-323:132-397)
20 30 40 50 60 70
pF1KB5 PWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARAVR-GQGQETSG
:. . : .... . :. : . : .:
CCDS55 TASSSGLPEVPSALPGPTAPTLPPCPDSPPGLVGRLLIEFTSPMPLERVQRENPGVLMGG
110 120 130 140 150 160
80 90 100 110 120 130
pF1KB5 PPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYV
: ::. : . .::..:::.: ..: .. ... .: :...:. .::
CCDS55 --RYTPPDCTPAQ----------TVAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGVYV
170 180 190 200
140 150 160 170 180
pF1KB5 LNQVDHFRFNRAALINVGFLES---SNSTDYIAMHDVDLLPLNEELDYGFPEAGPFH--V
.:: . :::: :.::::::. . . : . . ::::.:.... : . : : .
CCDS55 INQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQ-PRHFAI
210 220 230 240 250 260
190 200 210 220 230 240
pF1KB5 ASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRP
: .. : : ::. ::: .. ::. :..:::: :::... ::. .:... ::
CCDS55 AMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRP
270 280 290 300 310 320
250 260 270 280 290 300
pF1KB5 SGITTG-YKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGG
. : : :. ..: .: . . .:.. .. .. . :.: ...:.:.: : :.
CCDS55 D-IRIGRYRMIKHDRDKH-NEPNPQRFTKIQNTKLTMKRDG-IGSVRYQV-----LEVSR
330 340 350 360 370 380
310 320
pF1KB5 APCTVLNIMLDCDKTATPWCTFS
: :: .: . . :
CCDS55 QP-LFTNITVDIGRPPS-WPPRG
390 400
327 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:48:02 2016 done: Sat Nov 5 12:48:02 2016
Total Scan time: 2.710 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]