Result of FASTA (ccds) for
pF1KB5411
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5411, 595 aa
1>>>pF1KB5411 595 - 595 aa - 595 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.2272+/-0.00135; mu= -7.3608+/- 0.080
mean_var=357.6001+/-75.840, 0's: 0 Z-trim(110.1): 118 B-trim: 291 in 2/51
Lambda= 0.067823
statistics sampled from 11293 (11396) to 11293 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.35), width: 16
Scan time: 3.770
The best scores are: opt bits E(32554)
CCDS13861.1 NF2 gene_id:4771|Hs108|chr22 ( 595) 3834 389.6 5.9e-108
CCDS13862.1 NF2 gene_id:4771|Hs108|chr22 ( 590) 3742 380.6 3e-105
CCDS13863.1 NF2 gene_id:4771|Hs108|chr22 ( 548) 3207 328.3 1.6e-89
CCDS13865.1 NF2 gene_id:4771|Hs108|chr22 ( 507) 2945 302.6 8e-82
CCDS13864.1 NF2 gene_id:4771|Hs108|chr22 ( 549) 2932 301.3 2.1e-81
CCDS8343.1 RDX gene_id:5962|Hs108|chr11 ( 583) 1704 181.2 3.2e-45
CCDS58174.1 RDX gene_id:5962|Hs108|chr11 ( 604) 1704 181.2 3.3e-45
CCDS14382.1 MSN gene_id:4478|Hs108|chrX ( 577) 1688 179.6 9.4e-45
CCDS5258.1 EZR gene_id:7430|Hs108|chr6 ( 586) 1680 178.9 1.6e-44
CCDS58172.1 RDX gene_id:5962|Hs108|chr11 ( 447) 1054 117.5 3.6e-26
CCDS54516.1 NF2 gene_id:4771|Hs108|chr22 ( 165) 989 110.8 1.4e-24
>>CCDS13861.1 NF2 gene_id:4771|Hs108|chr22 (595 aa)
initn: 3834 init1: 3834 opt: 3834 Z-score: 2051.6 bits: 389.6 E(32554): 5.9e-108
Smith-Waterman score: 3834; 100.0% identity (100.0% similar) in 595 aa overlap (1-595:1-595)
10 20 30 40 50 60
pF1KB5 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FFGLQYTIKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FFGLQYTIKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
490 500 510 520 530 540
550 560 570 580 590
pF1KB5 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAFFEEL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAFFEEL
550 560 570 580 590
>>CCDS13862.1 NF2 gene_id:4771|Hs108|chr22 (590 aa)
initn: 3741 init1: 3741 opt: 3742 Z-score: 2003.0 bits: 380.6 E(32554): 3e-105
Smith-Waterman score: 3742; 99.0% identity (99.3% similar) in 586 aa overlap (1-586:1-586)
10 20 30 40 50 60
pF1KB5 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FFGLQYTIKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FFGLQYTIKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 QVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
490 500 510 520 530 540
550 560 570 580 590
pF1KB5 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAFFEEL
::::::::::::::::::::::::::::::::::::::: :. .
CCDS13 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKPQAQGRRPICI
550 560 570 580 590
>>CCDS13863.1 NF2 gene_id:4771|Hs108|chr22 (548 aa)
initn: 3206 init1: 3206 opt: 3207 Z-score: 1720.5 bits: 328.3 E(32554): 1.6e-89
Smith-Waterman score: 3349; 91.8% identity (92.2% similar) in 586 aa overlap (1-586:1-544)
10 20 30 40 50 60
pF1KB5 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
::::::::::::::::::::::::::::::::::::::
CCDS13 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCE----------------------
10 20 30
70 80 90 100 110 120
pF1KB5 FFGLQYTIKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFL
::::::::::::::::::::::::::::::::::::::::
CCDS13 --------------------VLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFL
40 50 60 70
130 140 150 160 170 180
pF1KB5 QVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB5 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB5 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB5 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB5 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
320 330 340 350 360 370
430 440 450 460 470 480
pF1KB5 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
380 390 400 410 420 430
490 500 510 520 530 540
pF1KB5 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
440 450 460 470 480 490
550 560 570 580 590
pF1KB5 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAFFEEL
::::::::::::::::::::::::::::::::::::::: :. .
CCDS13 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKPQAQGRRPICI
500 510 520 530 540
>>CCDS13865.1 NF2 gene_id:4771|Hs108|chr22 (507 aa)
initn: 2931 init1: 2931 opt: 2945 Z-score: 1582.4 bits: 302.6 E(32554): 8e-82
Smith-Waterman score: 2996; 84.8% identity (85.2% similar) in 586 aa overlap (1-586:1-503)
10 20 30 40 50 60
pF1KB5 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
::::::::::::::::::::::::::::::::::::::
CCDS13 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCE----------------------
10 20 30
70 80 90 100 110 120
pF1KB5 FFGLQYTIKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFL
CCDS13 ------------------------------------------------------------
130 140 150 160 170 180
pF1KB5 QVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 -VKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB5 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB5 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB5 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB5 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
280 290 300 310 320 330
430 440 450 460 470 480
pF1KB5 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
340 350 360 370 380 390
490 500 510 520 530 540
pF1KB5 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
400 410 420 430 440 450
550 560 570 580 590
pF1KB5 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAFFEEL
::::::::::::::::::::::::::::::::::::::: :. .
CCDS13 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKPQAQGRRPICI
460 470 480 490 500
>>CCDS13864.1 NF2 gene_id:4771|Hs108|chr22 (549 aa)
initn: 2931 init1: 2931 opt: 2932 Z-score: 1575.1 bits: 301.3 E(32554): 2.1e-81
Smith-Waterman score: 3379; 92.0% identity (92.3% similar) in 586 aa overlap (1-586:1-545)
10 20 30 40 50 60
pF1KB5 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 FFGLQYTIKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFFL
:::::::::::::::::::::
CCDS13 FFGLQYTIKDTVAWLKMDKKV---------------------------------------
70 80
130 140 150 160 170 180
pF1KB5 QVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 --KKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMT
90 100 110 120 130
190 200 210 220 230 240
pF1KB5 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 PEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALG
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB5 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLC
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB5 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 IGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRL
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB5 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 LQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTE
320 330 340 350 360 370
430 440 450 460 470 480
pF1KB5 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 EEKRLMEQKVLEAEVLALKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPT
380 390 400 410 420 430
490 500 510 520 530 540
pF1KB5 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLN
440 450 460 470 480 490
550 560 570 580 590
pF1KB5 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAFFEEL
::::::::::::::::::::::::::::::::::::::: :. .
CCDS13 ELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKPQAQGRRPICI
500 510 520 530 540
>>CCDS8343.1 RDX gene_id:5962|Hs108|chr11 (583 aa)
initn: 1518 init1: 1330 opt: 1704 Z-score: 925.4 bits: 181.2 E(32554): 3.2e-45
Smith-Waterman score: 1704; 45.3% identity (74.5% similar) in 585 aa overlap (19-595:2-583)
10 20 30 40 50 60
pF1KB5 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
:: ..::..:::::.:: . . ::.::: : .:.::::.:
CCDS83 MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVW
10 20 30 40
70 80 90 100 110
pF1KB5 FFGLQYT-IKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFF
::::::. : .:::..::: ..::.::.:. :.: :::.::.. :::.:::::.:::
CCDS83 FFGLQYVDSKGYSTWLKLNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFF
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB5 LQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQM
::::. ::...::::::..:::::::::::::::. .:: :.::...:::.::.. ...
CCDS83 LQVKEAILNDEIYCPPETAVLLASYAVQAKYGDYNKEIHKPGYLANDRLLPQRVLEQHKL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB5 TPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDAL
: :.::::: :. :::: :... :::::::::::::::::: :.::::::: ::::::
CCDS83 TKEQWEERIQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDAL
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 GLHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQL
::.::. ...:::::.:::.::::::..::.:.:::.::: : : . .::.:: :: :
CCDS83 GLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILAL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 CIGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERR
:.:::.:.::::: :..::::::::::::: .::.:: .: ::. :: ::. ....::.
CCDS83 CMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERAQLENEKKKREIAEKEKERIERE
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB5 LLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKA--TAI
.. :. . .: ..... . ..:: ..: : ..: . :.: . . .::
CCDS83 KEELMERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAAEEAKSAI
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB5 RTEEEKRLMEQKVLEAEV--LALKMA---EESERRAKEADQLKQDLQEAREAERRAKQKL
. .. .:. : ::. .. :.: : .... .:: . .. :.: ...:..:
CCDS83 AKQAADQMKNQEQLAAELAEFTAKIALLEEAKKKKEEEATEWQHKAFAAQEDLEKTKEEL
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB5 LEIATKPTYPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKS
. . : :: :. : . . . : .... . .. . :.:.: .:.
CCDS83 KTVMSAPPPPPPPPVIPPTENEHDEHDENNAEASAELSNEGV--MNHRSEEERVTETQKN
470 480 490 500 510 520
540 550 560 570 580 590
pF1KB5 KHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAFF
.....::. :..:. . . ..: :.:: :: ..: .:..:.... ..:.:. :
CCDS83 ERVKKQLQALSSELAQARDETKKTQNDVLHAENV-KAGRDKYKTLRQIRQGNTKQRIDEF
530 540 550 560 570 580
pF1KB5 EEL
: .
CCDS83 EAM
>>CCDS58174.1 RDX gene_id:5962|Hs108|chr11 (604 aa)
initn: 1518 init1: 1330 opt: 1704 Z-score: 925.2 bits: 181.2 E(32554): 3.3e-45
Smith-Waterman score: 1704; 45.3% identity (74.5% similar) in 585 aa overlap (19-595:2-583)
10 20 30 40 50 60
pF1KB5 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
:: ..::..:::::.:: . . ::.::: : .:.::::.:
CCDS58 MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVW
10 20 30 40
70 80 90 100 110
pF1KB5 FFGLQYT-IKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFF
::::::. : .:::..::: ..::.::.:. :.: :::.::.. :::.:::::.:::
CCDS58 FFGLQYVDSKGYSTWLKLNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFF
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB5 LQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQM
::::. ::...::::::..:::::::::::::::. .:: :.::...:::.::.. ...
CCDS58 LQVKEAILNDEIYCPPETAVLLASYAVQAKYGDYNKEIHKPGYLANDRLLPQRVLEQHKL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB5 TPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDAL
: :.::::: :. :::: :... :::::::::::::::::: :.::::::: ::::::
CCDS58 TKEQWEERIQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDAL
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 GLHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQL
::.::. ...:::::.:::.::::::..::.:.:::.::: : : . .::.:: :: :
CCDS58 GLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILAL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 CIGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERR
:.:::.:.::::: :..::::::::::::: .::.:: .: ::. :: ::. ....::.
CCDS58 CMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERAQLENEKKKREIAEKEKERIERE
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB5 LLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKA--TAI
.. :. . .: ..... . ..:: ..: : ..: . :.: . . .::
CCDS58 KEELMERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAAEEAKSAI
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB5 RTEEEKRLMEQKVLEAEV--LALKMA---EESERRAKEADQLKQDLQEAREAERRAKQKL
. .. .:. : ::. .. :.: : .... .:: . .. :.: ...:..:
CCDS58 AKQAADQMKNQEQLAAELAEFTAKIALLEEAKKKKEEEATEWQHKAFAAQEDLEKTKEEL
410 420 430 440 450 460
480 490 500 510 520 530
pF1KB5 LEIATKPTYPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKS
. . : :: :. : . . . : .... . .. . :.:.: .:.
CCDS58 KTVMSAPPPPPPPPVIPPTENEHDEHDENNAEASAELSNEGV--MNHRSEEERVTETQKN
470 480 490 500 510 520
540 550 560 570 580 590
pF1KB5 KHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAFF
.....::. :..:. . . ..: :.:: :: ..: .:..:.... ..:.:. :
CCDS58 ERVKKQLQALSSELAQARDETKKTQNDVLHAENV-KAGRDKYKTLRQIRQGNTKQRIDEF
530 540 550 560 570 580
pF1KB5 EEL
: .
CCDS58 EAMWGPKLYALFQMRSCQSSIKQM
590 600
>>CCDS14382.1 MSN gene_id:4478|Hs108|chrX (577 aa)
initn: 1551 init1: 1275 opt: 1688 Z-score: 917.0 bits: 179.6 E(32554): 9.4e-45
Smith-Waterman score: 1688; 46.8% identity (73.5% similar) in 586 aa overlap (19-595:2-577)
10 20 30 40 50 60
pF1KB5 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
:::..::..:::::.:: . . ::.::: : .:.::::.:
CCDS14 MPKTISVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVW
10 20 30 40
70 80 90 100 110
pF1KB5 FFGLQYT-IKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFF
:::::: : .:::..::: .:: :: :. :.: ::::::.. :::.:.:::.:::
CCDS14 FFGLQYQDTKGFSTWLKLNKKVTAQDVRKESPLLFKFRAKFYPEDVSEELIQDITQRLFF
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB5 LQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQM
::::. ::.. ::::::..:::::::::.::::.. ::: :.:: ..:::.::.. ...
CCDS14 LQVKEGILNDDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB5 TPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDAL
. ..::::: .:. :::: :..: .:::::::::::::::::.:.::::.:: ::::::
CCDS14 NKDQWEERIQVWHEEHRGMLREDAVLEYLKIAQDLEMYGVNYFSIKNKKGSELWLGVDAL
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 GLHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQL
::.::. ..::::::.:::.::::::..::.:.:::.::: : : . .::.:: :: :
CCDS14 GLNIYEQNDRLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILAL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 CIGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELER-
:.:::.:.::::: :..::::::::::::: .::::: : ::. :: ::. ....::
CCDS14 CMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMERAMLENEKKKREMAEKEKEKIERE
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB5 ------RLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRI
:: :..:.. :.. : .. . : : .. . .. ::. ::.. :::. .
CCDS14 KEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKRAQSEAEKLAKERQEAEEAKE--
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB5 KATAIRTEEEKRLMEQKVLEAEVLALKMAE-ESERRAKEADQLKQDLQEAREAERRAKQK
: ....:. .:: .:: :. .... : :. ::.. .. . :.:. ... ..
CCDS14 -ALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAVEWQ-QKAQMVQEDLEKT
410 420 430 440 450
480 490 500 510 520 530
pF1KB5 LLEIATKPTYPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEK
:. : . : . :: : . : : : :.. : . : .:.. ::
CCDS14 RAELKTAMSTPHVAE-PAENEQDEQDEN--GAEASADLRADAMAKDRSE--EERTTEAEK
460 470 480 490 500 510
540 550 560 570 580 590
pF1KB5 SKHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAF
....:..:. : .:. . . ..:: :..: :: : : .:..:.... ..:.:.
CCDS14 NERVQKHLKALTSELANARDESKKTANDMIHAENM-RLGRDKYKTLRQIRQGNTKQRIDE
520 530 540 550 560 570
pF1KB5 FEEL
:: .
CCDS14 FESM
>>CCDS5258.1 EZR gene_id:7430|Hs108|chr6 (586 aa)
initn: 1604 init1: 1302 opt: 1680 Z-score: 912.6 bits: 178.9 E(32554): 1.6e-44
Smith-Waterman score: 1680; 46.4% identity (73.7% similar) in 593 aa overlap (19-595:2-586)
10 20 30 40 50 60
pF1KB5 MAGAIASRMSFSSLKRKQPKTFTVRIVTMDAEMEFNCEMKWKGKDLFDLVCRTLGLRETW
:: ..::..:::::.:: . . ::.::: : .:.::::.:
CCDS52 MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVW
10 20 30 40
70 80 90 100 110
pF1KB5 FFGLQYT-IKDTVAWLKMDKKVLDHDVSKEEPVTFHFLAKFYPENAEEELVQEITQHLFF
.:::.:. : .:::.:::: ..: ::.:. :.: ::::::.. :::.:.:::.:::
CCDS52 YFGLHYVDNKGFPTWLKLDKKVSAQEVRKENPLQFKFRAKFYPEDVAEELIQDITQKLFF
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB5 LQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQM
::::. ::...::::::..:::.:::::::.:::. ::: :.:..:.:.:.::.. ...
CCDS52 LQVKEGILSDEIYCPPETAVLLGSYAVQAKFGDYNKEVHKSGYLSSERLIPQRVMDQHKL
110 120 130 140 150 160
180 190 200 210 220 230
pF1KB5 TPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDAL
: ..::.:: .:.::::: .:.: .:::::::::::::.::: :.:::::.: ::::::
CCDS52 TRDQWEDRIQVWHAEHRGMLKDNAMLEYLKIAQDLEMYGINYFEIKNKKGTDLWLGVDAL
170 180 190 200 210 220
240 250 260 270 280 290
pF1KB5 GLHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQL
::.::. ...:::::.:::.::::::..::.:.:::.::: : : . .::.:: ::::
CCDS52 GLNIYEKDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILQL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB5 CIGNHDLFMRRRKADSLEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERR
:.:::.:.::::: :..::::::::::::: .::.:::.: ::. :: .:: .... :.
CCDS52 CMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMRE
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB5 LLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRT
.. . .: ..:. . ..: ::: : ::. :: . : .:. : .
CCDS52 KEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKR-AQEEAE-RLEADRMAALRAKE
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB5 EEEKRLMEQKVLEAEVLALKMAEESERRA--KEADQLKQDLQEAREAERRAKQKLLE-IA
: :.. ..: . : :: ..:: . . : .:: . :.: :..: ..:::. . .
CCDS52 ELERQAVDQ-IKSQEQLAAELAEYTAKIALLEEARRRKED--EVEEWQHRAKEAQDDLVK
410 420 430 440 450
480 490 500 510 520
pF1KB5 TKPTYPPMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMK------RLSME------IEKE
:: . : : :: : .. .. .. ...: . .:: : :..
CCDS52 TKEELHLVMTAPPPPPP--PVYEPVSYHVQESLQDEGAEPTGYSAELSSEGIRDDRNEEK
460 470 480 490 500 510
530 540 550 560 570 580
pF1KB5 KVEYMEKSKHLQEQLNELKTEIEALKLKERETALDILHNENSDRGGSSKHNTIKKLTLQS
.. ::....:.:: :..:. . ....: ::.:::: : : .:..:.... .
CCDS52 RITEAEKNERVQRQLLTLSSELSQARDENKRTHNDIIHNENM-RQGRDKYKTLRQIRQGN
520 530 540 550 560 570
590
pF1KB5 AKSRVAFFEEL
.:.:. :: :
CCDS52 TKQRIDEFEAL
580
>>CCDS58172.1 RDX gene_id:5962|Hs108|chr11 (447 aa)
initn: 868 init1: 868 opt: 1054 Z-score: 583.2 bits: 117.5 E(32554): 3.6e-26
Smith-Waterman score: 1054; 39.5% identity (70.2% similar) in 430 aa overlap (173-595:21-447)
150 160 170 180 190 200
pF1KB5 SYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRGRARDE
:.. ...: :.::::: :. :::: :..
CCDS58 MLSWNLPFSPIQLANNFLTSVLEQHKLTKEQWEERIQNWHEEHRGMLRED
10 20 30 40 50
210 220 230 240 250 260
pF1KB5 AEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALGLHIYDPENRLTPKISFPWNEIR
. :::::::::::::::::: :.::::::: ::::::::.::. ...:::::.:::.:::
CCDS58 SMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHDDKLTPKIGFPWSEIR
60 70 80 90 100 110
270 280 290 300 310 320
pF1KB5 NISYSDKEFTIKPLDKKIDVFKFNSSKLRVNKLILQLCIGNHDLFMRRRKADSLEVQQMK
:::..::.:.:::.::: : : . .::.:: :: ::.:::.:.::::: :..::::::
CCDS58 NISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMK
120 130 140 150 160 170
330 340 350 360 370 380
pF1KB5 AQAREEKARKQMERQRLAREKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETAD
::::::: .::.:: .: ::. :: ::. ....::. .. :. . .: ..... .
CCDS58 AQAREEKHQKQLERAQLENEKKKREIAEKEKERIEREKEELMERLKQIEEQTIKAQKELE
180 190 200 210 220 230
390 400 410 420 430
pF1KB5 LLAEKAQITEEEAKLLAQKAAEAEQEMQRIKA--TAIRTEEEKRLMEQKVLEAEV--LAL
..:: ..: : ..: . :.: . . .:: . .. .:. : ::. ..
CCDS58 EQTRKALELDQERKRAKEEAERLEKERRAAEEAKSAIAKQAADQMKNQEQLAAELAEFTA
240 250 260 270 280 290
440 450 460 470 480 490
pF1KB5 KMA---EESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPTYPPMNPIPAPLPPDI
:.: : .... .:: . .. :.: ...:..: . . : :: :. : .
CCDS58 KIALLEEAKKKKEEEATEWQHKAFAAQEDLEKTKEELKTVMSAPPPPPPPPVIPPTENEH
300 310 320 330 340 350
500 510 520 530 540 550
pF1KB5 PSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNELKTEIEALKLKERE
. . : .... . .. . :.:.: .:......::. :..:. . . ..
CCDS58 DEHDENNAEASAELSNEGV--MNHRSEEERVTETQKNERVKKQLQALSSELAQARDETKK
360 370 380 390 400
560 570 580 590
pF1KB5 TALDILHNENSDRGGSSKHNTIKKLTLQSAKSRVAFFEEL
: :.:: :: ..: .:..:.... ..:.:. :: .
CCDS58 TQNDVLHAENV-KAGRDKYKTLRQIRQGNTKQRIDEFEAM
410 420 430 440
595 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 22:01:10 2016 done: Sat Nov 5 22:01:11 2016
Total Scan time: 3.770 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]