Result of FASTA (omim) for
pF1KB5398
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5398, 181 aa
1>>>pF1KB5398 181 - 181 aa - 181 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0483+/-0.000448; mu= 14.7587+/- 0.028
mean_var=94.1845+/-21.209, 0's: 0 Z-trim(111.5): 246 B-trim: 1253 in 2/51
Lambda= 0.132155
statistics sampled from 19789 (20179) to 19789 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.237), width: 16
Scan time: 5.290
The best scores are: opt bits E(85289)
NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 ( 181) 1194 237.7 7.6e-63
NP_001019398 (OMIM: 103180) ADP-ribosylation facto ( 181) 1194 237.7 7.6e-63
NP_001019397 (OMIM: 103180) ADP-ribosylation facto ( 181) 1194 237.7 7.6e-63
NP_001019399 (OMIM: 103180) ADP-ribosylation facto ( 181) 1194 237.7 7.6e-63
NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 ( 181) 1153 229.9 1.7e-60
XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 181) 1153 229.9 1.7e-60
NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 ( 180) 975 196.0 2.8e-50
NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 ( 180) 972 195.4 4.2e-50
NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 ( 175) 856 173.3 1.9e-43
XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosyl ( 212) 828 168.0 8.5e-42
XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 137) 800 162.5 2.6e-40
NP_001168 (OMIM: 603425) ADP-ribosylation factor-l ( 181) 723 147.9 8.2e-36
XP_005248554 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 398) 699 143.7 3.3e-34
NP_001647 (OMIM: 601747) E3 ubiquitin-protein liga ( 574) 699 143.9 4.2e-34
NP_848930 (OMIM: 608909) ADP-ribosylation factor-l ( 179) 611 126.6 2.2e-29
NP_036229 (OMIM: 608960) ADP-ribosylation factor-l ( 179) 607 125.8 3.7e-29
XP_016864933 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 569) 611 127.1 4.7e-29
NP_150230 (OMIM: 601747) E3 ubiquitin-protein liga ( 569) 611 127.1 4.7e-29
NP_150231 (OMIM: 601747) E3 ubiquitin-protein liga ( 546) 582 121.6 2.1e-27
NP_001658 (OMIM: 601175) ADP-ribosylation factor-l ( 184) 553 115.5 4.7e-26
NP_079323 (OMIM: 614439) ADP-ribosylation factor-l ( 192) 545 114.0 1.4e-25
XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosyl ( 182) 536 112.3 4.4e-25
NP_004302 (OMIM: 604695) ADP-ribosylation factor-l ( 182) 536 112.3 4.4e-25
NP_005728 (OMIM: 604787) ADP-ribosylation factor-l ( 192) 523 109.8 2.6e-24
NP_001269360 (OMIM: 604787) ADP-ribosylation facto ( 201) 523 109.9 2.6e-24
NP_001287997 (OMIM: 603425) ADP-ribosylation facto ( 135) 500 105.3 4.2e-23
NP_005729 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 498 105.1 7.1e-23
NP_001182325 (OMIM: 604786) ADP-ribosylation facto ( 200) 498 105.1 7.1e-23
NP_001032241 (OMIM: 604786) ADP-ribosylation facto ( 200) 498 105.1 7.1e-23
NP_997625 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 498 105.1 7.1e-23
XP_005252458 (OMIM: 608909) PREDICTED: ADP-ribosyl ( 142) 488 103.0 2.1e-22
NP_817114 (OMIM: 608960) ADP-ribosylation factor-l ( 142) 486 102.6 2.8e-22
NP_001032251 (OMIM: 608960) ADP-ribosylation facto ( 142) 486 102.6 2.8e-22
NP_001652 (OMIM: 600732) ADP-ribosylation factor-l ( 201) 470 99.8 2.9e-21
XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosyl ( 201) 470 99.8 2.9e-21
NP_001265222 (OMIM: 209900,268000,600151,608845,61 ( 186) 468 99.3 3.6e-21
XP_016862800 (OMIM: 209900,268000,600151,608845,61 ( 186) 468 99.3 3.6e-21
NP_115522 (OMIM: 209900,268000,600151,608845,61357 ( 186) 468 99.3 3.6e-21
NP_816931 (OMIM: 209900,268000,600151,608845,61357 ( 186) 468 99.3 3.6e-21
NP_001310442 (OMIM: 209900,268000,600151,608845,61 ( 193) 455 96.9 2e-20
NP_612459 (OMIM: 609351) ADP-ribosylation factor-l ( 196) 442 94.4 1.2e-19
XP_005266310 (OMIM: 609351) PREDICTED: ADP-ribosyl ( 196) 442 94.4 1.2e-19
NP_060654 (OMIM: 616596) ADP-ribosylation factor-l ( 186) 402 86.8 2.2e-17
NP_620150 (OMIM: 616597) ADP-ribosylation factor-l ( 186) 391 84.7 9.4e-17
XP_016862801 (OMIM: 209900,268000,600151,608845,61 ( 159) 384 83.2 2.1e-16
NP_001310443 (OMIM: 209900,268000,600151,608845,61 ( 159) 384 83.2 2.1e-16
NP_001186674 (OMIM: 601175) ADP-ribosylation facto ( 157) 366 79.8 2.3e-15
XP_016883065 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 367 80.1 2.4e-15
NP_003215 (OMIM: 604699) ADP-ribosylation factor-r ( 201) 367 80.1 2.4e-15
XP_011526785 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 367 80.1 2.4e-15
>>NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 [Ho (181 aa)
initn: 1194 init1: 1194 opt: 1194 Z-score: 1249.3 bits: 237.7 E(85289): 7.6e-63
Smith-Waterman score: 1194; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
pF1KB5 K
:
NP_001 K
>>NP_001019398 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 1194 init1: 1194 opt: 1194 Z-score: 1249.3 bits: 237.7 E(85289): 7.6e-63
Smith-Waterman score: 1194; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
pF1KB5 K
:
NP_001 K
>>NP_001019397 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 1194 init1: 1194 opt: 1194 Z-score: 1249.3 bits: 237.7 E(85289): 7.6e-63
Smith-Waterman score: 1194; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
pF1KB5 K
:
NP_001 K
>>NP_001019399 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa)
initn: 1194 init1: 1194 opt: 1194 Z-score: 1249.3 bits: 237.7 E(85289): 7.6e-63
Smith-Waterman score: 1194; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
130 140 150 160 170 180
pF1KB5 K
:
NP_001 K
>>NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 [Ho (181 aa)
initn: 1153 init1: 1153 opt: 1153 Z-score: 1207.1 bits: 229.9 E(85289): 1.7e-60
Smith-Waterman score: 1153; 96.1% identity (100.0% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:::::.::.:.:.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::.:::.:.
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
130 140 150 160 170 180
pF1KB5 K
:
NP_001 K
>>XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosylatio (181 aa)
initn: 1153 init1: 1153 opt: 1153 Z-score: 1207.1 bits: 229.9 E(85289): 1.7e-60
Smith-Waterman score: 1153; 96.1% identity (100.0% similar) in 181 aa overlap (1-181:1-181)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:::::.::.:.:.:::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::.:::.:.
XP_005 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
130 140 150 160 170 180
pF1KB5 K
:
XP_005 K
>>NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 [Ho (180 aa)
initn: 975 init1: 975 opt: 975 Z-score: 1023.7 bits: 196.0 E(85289): 2.8e-50
Smith-Waterman score: 975; 81.9% identity (94.4% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:: ...::. :::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
: ::::::::::.:::::.::::::::::::::::::::..:. .::..:: :::::::
NP_001 ICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
::.::::::::::: .:.::::::.:::.:.::.::::::.: :::::::::::.:
NP_001 LLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR
130 140 150 160 170 180
pF1KB5 K
>>NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 [Ho (180 aa)
initn: 972 init1: 972 opt: 972 Z-score: 1020.6 bits: 195.4 E(85289): 4.2e-50
Smith-Waterman score: 972; 81.9% identity (93.2% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
:: . ::. .::::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
: ::::::::::::::::::::::::::::::::::::::.:. .::..:: ::::::::
NP_001 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
:::::::::.:::: ..:.::::::. :: :.::.::::::.: :::.::::::..:
NP_001 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
130 140 150 160 170 180
pF1KB5 K
>>NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 [Ho (175 aa)
initn: 876 init1: 851 opt: 856 Z-score: 901.2 bits: 173.3 E(85289): 1.9e-43
Smith-Waterman score: 856; 67.6% identity (88.3% similar) in 179 aa overlap (1-179:1-175)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
::..... .::.:::::::.:::::::::::::::::. ::::::.::::::: :::
NP_001 MGKVLSK----IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
..:.:::::::::::::::::. .::::::::: ::.:..:::.:: :.. . :.:::.
NP_001 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
.:.::::::::.::. :: .:::: .: ::::.: .:::::::::::: ::... ..
NP_001 ILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS
120 130 140 150 160 170
pF1KB5 K
>>XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosylatio (212 aa)
initn: 828 init1: 828 opt: 828 Z-score: 871.3 bits: 168.0 E(85289): 8.5e-42
Smith-Waterman score: 828; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128)
10 20 30 40 50 60
pF1KB5 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
::::::::
XP_016 LLVFANKQVGARASLGNVRSQCGFRLVVGVTGGWWGPFLCPVDSPSHQPFLPPGPPQRHE
130 140 150 160 170 180
181 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 17:18:46 2016 done: Thu Nov 3 17:18:47 2016
Total Scan time: 5.290 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]