FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5397, 309 aa
  1>>>pF1KB5397 309 - 309 aa - 309 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6546+/-0.000339; mu= 19.4465+/- 0.021
 mean_var=60.9182+/-12.243, 0's: 0 Z-trim(114.5): 28  B-trim: 898 in 1/54
 Lambda= 0.164324
 statistics sampled from 24428 (24452) to 24428 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.287), width:  16
 Scan time:  7.420

The best scores are:                                      opt bits E(85289)
NP_078895 (OMIM: 611683) ketosamine-3-kinase [Homo ( 309) 2112 508.9 5.1e-144
NP_071441 (OMIM: 608425) fructosamine-3-kinase [Ho ( 309) 1409 342.3 7.5e-94


>>NP_078895 (OMIM: 611683) ketosamine-3-kinase [Homo sap  (309 aa)
 initn: 2112 init1: 2112 opt: 2112  Z-score: 2706.6  bits: 508.9 E(85289): 5.1e-144
Smith-Waterman score: 2112; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)

               10        20        30        40        50        60
pF1KB5 MEELLRRELGCSSVRATGHSGGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 MEELLRRELGCSSVRATGHSGGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 AILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 AILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 RLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 RLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 EKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 EKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 HSEYELAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 HSEYELAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSS
              250       260       270       280       290       300

                
pF1KB5 LNIMRNLVK
       :::::::::
NP_078 LNIMRNLVK
                

>>NP_071441 (OMIM: 608425) fructosamine-3-kinase [Homo s  (309 aa)
 initn: 1451 init1: 1409 opt: 1409  Z-score: 1805.9  bits: 342.3 E(85289): 7.5e-94
Smith-Waterman score: 1409; 64.4% identity (84.5% similar) in 309 aa overlap (1-309:1-309)

               10        20        30        40        50        60
pF1KB5 MEELLRRELGCSSVRATGHSGGGCISQGRSYDTDQGRVFVKVNPKAEARRMFEGEMASLT
       ::.::: ::  ...:: :  :.::::.::.:::: : :::::: ...::.:::::.::: 
NP_071 MEQLLRAELRTATLRAFGGPGAGCISEGRAYDTDAGPVFVKVNRRTQARQMFEGEVASLE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 AILKTNTVKVPKPIKVLDAPGGGSVLVMEHMDMRHLSSHAAKLGAQLADLHLDNKKLGEM
       :. .:. :.::.:.::.: ::::...::::. :. :::.:.::: :.::::: :.:: : 
NP_071 ALRSTGLVRVPRPMKVIDLPGGGAAFVMEHLKMKSLSSQASKLGEQMADLHLYNQKLREK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 RLKEAGTVGRGGGQEERPFVARFGFDVVTCCGYLPQVNDWQEDWVVFYARQRIQPQMDMV
         .: .:::: :   :  .: .::: .:::::..::::.::.:: .:.::.:.: :.:..
NP_071 LKEEENTVGRRGEGAEPQYVDKFGFHTVTCCGFIPQVNEWQDDWPTFFARHRLQAQLDLI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 EKESGDREALQLWSALQLKIPDLFRDLEIIPALLHGDLWGGNVAEDSSGPVIFDPASFYG
       ::. .:::: .::: ::.::::::  :::.:::::::::.::::::. ::.:.:::::::
NP_071 EKDYADREARELWSRLQVKIPDLFCGLEIVPALLHGDLWSGNVAEDDVGPIIYDPASFYG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 HSEYELAIAGMFGGFSSSFYSAYHGKIPKAPGFEKRLQLYQLFHYLNHWNHFGSGYRGSS
       :::.::::: :::::  ::..::: ::::::::..:: :::::.:::::::::  ::. :
NP_071 HSEFELAIALMFGGFPRSFFTAYHRKIPKAPGFDQRLLLYQLFNYLNHWNHFGREYRSPS
              250       260       270       280       290       300

                
pF1KB5 LNIMRNLVK
       :. :: :.:
NP_071 LGTMRRLLK
                




309 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 22:31:11 2016 done: Thu Nov  3 22:31:12 2016
 Total Scan time:  7.420 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]