Result of FASTA (omim) for
pF1KB5396
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5396, 633 aa
1>>>pF1KB5396 633 - 633 aa - 633 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4978+/-0.000464; mu= 21.4453+/- 0.030
mean_var=412.8048+/-87.589, 0's: 0 Z-trim(121.3): 108 B-trim: 3945 in 2/56
Lambda= 0.063125
statistics sampled from 37553 (37715) to 37553 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.741), E-opt: 0.2 (0.442), width: 16
Scan time: 12.120
The best scores are: opt bits E(85289)
NP_005817 (OMIM: 607201) heterogeneous nuclear rib ( 633) 4363 412.2 2.8e-114
XP_005245768 (OMIM: 607201) PREDICTED: heterogeneo ( 633) 4363 412.2 2.8e-114
XP_011538773 (OMIM: 607201) PREDICTED: heterogeneo ( 636) 4347 410.7 7.8e-114
NP_001095868 (OMIM: 607201) heterogeneous nuclear ( 636) 4347 410.7 7.8e-114
NP_001095867 (OMIM: 607201) heterogeneous nuclear ( 532) 3722 353.7 9.9e-97
NP_001095869 (OMIM: 607201) heterogeneous nuclear ( 535) 3706 352.2 2.7e-96
NP_006363 (OMIM: 616686) heterogeneous nuclear rib ( 623) 3551 338.2 5.1e-92
XP_005248694 (OMIM: 616686) PREDICTED: heterogeneo ( 623) 3551 338.2 5.1e-92
XP_016865665 (OMIM: 616686) PREDICTED: heterogeneo ( 605) 3394 323.9 1e-87
XP_016865666 (OMIM: 616686) PREDICTED: heterogeneo ( 604) 3387 323.3 1.6e-87
NP_001284549 (OMIM: 607201) heterogeneous nuclear ( 595) 3295 314.9 5.2e-85
XP_016855497 (OMIM: 607201) PREDICTED: heterogeneo ( 595) 3295 314.9 5.2e-85
NP_001284551 (OMIM: 607201) heterogeneous nuclear ( 494) 3293 314.5 5.5e-85
XP_011538777 (OMIM: 607201) PREDICTED: heterogeneo ( 598) 3279 313.4 1.4e-84
XP_011538776 (OMIM: 607201) PREDICTED: heterogeneo ( 598) 3279 313.4 1.4e-84
XP_011538778 (OMIM: 607201) PREDICTED: heterogeneo ( 497) 3277 313.1 1.5e-84
XP_005248693 (OMIM: 616686) PREDICTED: heterogeneo ( 525) 3100 297.0 1.1e-79
XP_005248692 (OMIM: 616686) PREDICTED: heterogeneo ( 561) 3094 296.5 1.7e-79
XP_016865668 (OMIM: 616686) PREDICTED: heterogeneo ( 561) 3094 296.5 1.7e-79
NP_001153148 (OMIM: 616686) heterogeneous nuclear ( 561) 3094 296.5 1.7e-79
XP_016865667 (OMIM: 616686) PREDICTED: heterogeneo ( 562) 3085 295.7 2.9e-79
NP_001153149 (OMIM: 616686) heterogeneous nuclear ( 562) 3085 295.7 2.9e-79
NP_001284550 (OMIM: 607201) heterogeneous nuclear ( 473) 2889 277.7 6.4e-74
XP_016855499 (OMIM: 607201) PREDICTED: heterogeneo ( 574) 2889 277.9 7e-74
XP_016855498 (OMIM: 607201) PREDICTED: heterogeneo ( 574) 2889 277.9 7e-74
XP_011538779 (OMIM: 607201) PREDICTED: heterogeneo ( 476) 2873 276.3 1.8e-73
XP_011538774 (OMIM: 607201) PREDICTED: heterogeneo ( 577) 2873 276.4 1.9e-73
XP_016865669 (OMIM: 616686) PREDICTED: heterogeneo ( 463) 2643 255.3 3.5e-67
NP_001153145 (OMIM: 616686) heterogeneous nuclear ( 464) 2634 254.5 6.3e-67
NP_001240700 (OMIM: 616686) heterogeneous nuclear ( 410) 2241 218.6 3.5e-56
NP_001153147 (OMIM: 616686) heterogeneous nuclear ( 588) 1752 174.3 1e-42
NP_001153146 (OMIM: 616686) heterogeneous nuclear ( 527) 1714 170.8 1.1e-41
NP_919225 (OMIM: 609385) dead end protein homolog ( 353) 469 57.1 1.3e-07
XP_006722896 (OMIM: 612680) PREDICTED: CUGBP Elav- ( 484) 296 41.6 0.0079
NP_001166144 (OMIM: 612680) CUGBP Elav-like family ( 409) 294 41.3 0.0084
NP_068757 (OMIM: 612680) CUGBP Elav-like family me ( 485) 294 41.4 0.009
XP_006722895 (OMIM: 612680) PREDICTED: CUGBP Elav- ( 485) 294 41.4 0.009
>>NP_005817 (OMIM: 607201) heterogeneous nuclear ribonuc (633 aa)
initn: 4363 init1: 4363 opt: 4363 Z-score: 2172.6 bits: 412.2 E(85289): 2.8e-114
Smith-Waterman score: 4363; 100.0% identity (100.0% similar) in 633 aa overlap (1-633:1-633)
10 20 30 40 50 60
pF1KB5 MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 FSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 AARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 DYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 GSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIA
550 560 570 580 590 600
610 620 630
pF1KB5 QQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
:::::::::::::::::::::::::::::::::
NP_005 QQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
610 620 630
>>XP_005245768 (OMIM: 607201) PREDICTED: heterogeneous n (633 aa)
initn: 4363 init1: 4363 opt: 4363 Z-score: 2172.6 bits: 412.2 E(85289): 2.8e-114
Smith-Waterman score: 4363; 100.0% identity (100.0% similar) in 633 aa overlap (1-633:1-633)
10 20 30 40 50 60
pF1KB5 MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 SAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 FSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 AARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 DYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 GSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIA
550 560 570 580 590 600
610 620 630
pF1KB5 QQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
:::::::::::::::::::::::::::::::::
XP_005 QQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
610 620 630
>>XP_011538773 (OMIM: 607201) PREDICTED: heterogeneous n (636 aa)
initn: 2597 init1: 2597 opt: 4347 Z-score: 2164.7 bits: 410.7 E(85289): 7.8e-114
Smith-Waterman score: 4347; 99.5% identity (99.5% similar) in 636 aa overlap (1-633:1-636)
10 20 30 40 50 60
pF1KB5 MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
190 200 210 220 230 240
250 260 270 280 290
pF1KB5 ISVANNRLFVGSIPKNKTKENILEEFSKVT---EGLVDVILYHQPDDKKKNRGFCFLEYE
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
XP_011 ISVANNRLFVGSIPKNKTKENILEEFSKVTGLTEGLVDVILYHQPDDKKKNRGFCFLEYE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 DHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEIL
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 EKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRK
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 ERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGY
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 DYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLG
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB5 PPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQ
550 560 570 580 590 600
600 610 620 630
pF1KB5 PIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
::::::::::::::::::::::::::::::::::::
XP_011 PIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
610 620 630
>>NP_001095868 (OMIM: 607201) heterogeneous nuclear ribo (636 aa)
initn: 2597 init1: 2597 opt: 4347 Z-score: 2164.7 bits: 410.7 E(85289): 7.8e-114
Smith-Waterman score: 4347; 99.5% identity (99.5% similar) in 636 aa overlap (1-633:1-636)
10 20 30 40 50 60
pF1KB5 MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MANQVNGNAVQLKEEEEPMDTSSVTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYVDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVC
190 200 210 220 230 240
250 260 270 280 290
pF1KB5 ISVANNRLFVGSIPKNKTKENILEEFSKVT---EGLVDVILYHQPDDKKKNRGFCFLEYE
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
NP_001 ISVANNRLFVGSIPKNKTKENILEEFSKVTGLTEGLVDVILYHQPDDKKKNRGFCFLEYE
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 DHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEIL
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 EKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRK
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 ERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGY
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB5 DYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLG
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB5 PPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQ
550 560 570 580 590 600
600 610 620 630
pF1KB5 PIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
::::::::::::::::::::::::::::::::::::
NP_001 PIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
610 620 630
>>NP_001095867 (OMIM: 607201) heterogeneous nuclear ribo (532 aa)
initn: 3722 init1: 3722 opt: 3722 Z-score: 1857.6 bits: 353.7 E(85289): 9.9e-97
Smith-Waterman score: 3722; 100.0% identity (100.0% similar) in 532 aa overlap (102-633:1-532)
80 90 100 110 120 130
pF1KB5 NEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTKGPDEAKIKALL
::::::::::::::::::::::::::::::
NP_001 MKTYRQREKQGSKVQESTKGPDEAKIKALL
10 20 30
140 150 160 170 180 190
pF1KB5 ERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPI
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB5 WDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVG
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB5 SIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMS
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB5 GKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVK
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB5 KLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAY
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB5 EDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYY
340 350 360 370 380 390
500 510 520 530 540 550
pF1KB5 GYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQ
400 410 420 430 440 450
560 570 580 590 600 610
pF1KB5 QQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGGDYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGGDYS
460 470 480 490 500 510
620 630
pF1KB5 GNYGYNNDNQEFYQDTYGQQWK
::::::::::::::::::::::
NP_001 GNYGYNNDNQEFYQDTYGQQWK
520 530
>>NP_001095869 (OMIM: 607201) heterogeneous nuclear ribo (535 aa)
initn: 2597 init1: 2597 opt: 3706 Z-score: 1849.8 bits: 352.2 E(85289): 2.7e-96
Smith-Waterman score: 3706; 99.4% identity (99.4% similar) in 535 aa overlap (102-633:1-535)
80 90 100 110 120 130
pF1KB5 NEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTKGPDEAKIKALL
::::::::::::::::::::::::::::::
NP_001 MKTYRQREKQGSKVQESTKGPDEAKIKALL
10 20 30
140 150 160 170 180 190
pF1KB5 ERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPI
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB5 WDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVG
100 110 120 130 140 150
260 270 280 290 300
pF1KB5 SIPKNKTKENILEEFSKVT---EGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRR
::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
NP_001 SIPKNKTKENILEEFSKVTGLTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRR
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB5 LMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLE
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB5 RVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRS
280 290 300 310 320 330
430 440 450 460 470 480
pF1KB5 TAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYED
340 350 360 370 380 390
490 500 510 520 530 540
pF1KB5 PYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYYGYDDGYAVRGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGG
400 410 420 430 440 450
550 560 570 580 590 600
pF1KB5 PAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPIAQQPLQQGG
460 470 480 490 500 510
610 620 630
pF1KB5 DYSGNYGYNNDNQEFYQDTYGQQWK
:::::::::::::::::::::::::
NP_001 DYSGNYGYNNDNQEFYQDTYGQQWK
520 530
>>NP_006363 (OMIM: 616686) heterogeneous nuclear ribonuc (623 aa)
initn: 2899 init1: 2505 opt: 3551 Z-score: 1773.0 bits: 338.2 E(85289): 5.1e-92
Smith-Waterman score: 3551; 82.1% identity (93.6% similar) in 636 aa overlap (1-633:1-623)
10 20 30 40 50
pF1KB5 MANQ-VNGNAVQLKEEEEPMDTSS-VTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYV
::.. ::::.. ::::::.: : :.:...::..:::::::::.::::. .::::.
NP_006 MATEHVNGNGT-----EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHS
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES
:::::::.::.::::.:::.::::::.:::::::::::::::::::::::::::.:: .:
NP_006 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 TKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYE
.::::::::::::::::::::::::::::::::::::::: ::..:::.:::::::::.:
NP_006 SKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 DELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLG
:::::::::::::::::::::::.: ::::::.::: :::::::::: ...::: :::.:
NP_006 DELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 VCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYED
:::::::::::::::::.::::.::::::::::::.::::::::::::::::::::::::
NP_006 VCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYED
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 HKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILE
::.::::::::::::::::::: :::::::.:.::::::::::::::::::.::::::::
NP_006 HKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILE
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 KSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKE
:.::.:::::::::::::::.::..: .:::::.:::::..:::.::::.:::::.::::
NP_006 KAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKE
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB5 RQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYD
:.: :::... :.::::. ::.:::: ::::::: :::::::::::::::::: :::::
NP_006 RKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG-RGGYGYPPDYYGYEDYYD-YYGYD
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB5 YHDYRGGYEDPYYGYDDGYAVRGRG-GGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLG
::.::::::::::::.: . : .:: ::::.::: : ::::: ::::::::::::.: :
NP_006 YHNYRGGYEDPYYGYED-FQVGARGRGGRGARGAAPS-RGRGAAPPRGRAGYSQRGGP-G
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB5 PPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQ
:: ::.::: :::::::: ::.::.::::::::::::::::::::::::::: :::::
NP_006 SARGVRGARGG-AQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQ-NWGSQ
540 550 560 570 580
600 610 620 630
pF1KB5 PIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
:::::::: :::.::::::...::::::::.:::::
NP_006 PIAQQPLQ-GGDHSGNYGYKSENQEFYQDTFGQQWK
590 600 610 620
>>XP_005248694 (OMIM: 616686) PREDICTED: heterogeneous n (623 aa)
initn: 2899 init1: 2505 opt: 3551 Z-score: 1773.0 bits: 338.2 E(85289): 5.1e-92
Smith-Waterman score: 3551; 82.1% identity (93.6% similar) in 636 aa overlap (1-633:1-623)
10 20 30 40 50
pF1KB5 MANQ-VNGNAVQLKEEEEPMDTSS-VTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYV
::.. ::::.. ::::::.: : :.:...::..:::::::::.::::. .::::.
XP_005 MATEHVNGNGT-----EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHS
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES
:::::::.::.::::.:::.::::::.:::::::::::::::::::::::::::.:: .:
XP_005 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 TKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYE
.::::::::::::::::::::::::::::::::::::::: ::..:::.:::::::::.:
XP_005 SKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 DELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLG
:::::::::::::::::::::::.: ::::::.::: :::::::::: ...::: :::.:
XP_005 DELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 VCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYED
:::::::::::::::::.::::.::::::::::::.::::::::::::::::::::::::
XP_005 VCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYED
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 HKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILE
::.::::::::::::::::::: :::::::.:.::::::::::::::::::.::::::::
XP_005 HKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILE
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 KSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKE
:.::.:::::::::::::::.::..: .:::::.:::::..:::.::::.:::::.::::
XP_005 KAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKE
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB5 RQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYD
:.: :::... :.::::. ::.:::: ::::::: :::::::::::::::::: :::::
XP_005 RKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG-RGGYGYPPDYYGYEDYYD-YYGYD
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB5 YHDYRGGYEDPYYGYDDGYAVRGRG-GGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLG
::.::::::::::::.: . : .:: ::::.::: : ::::: ::::::::::::.: :
XP_005 YHNYRGGYEDPYYGYED-FQVGARGRGGRGARGAAPS-RGRGAAPPRGRAGYSQRGGP-G
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB5 PPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQ
:: ::.::: :::::::: ::.::.::::::::::::::::::::::::::: :::::
XP_005 SARGVRGARGG-AQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQ-NWGSQ
540 550 560 570 580
600 610 620 630
pF1KB5 PIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
:::::::: :::.::::::...::::::::.:::::
XP_005 PIAQQPLQ-GGDHSGNYGYKSENQEFYQDTFGQQWK
590 600 610 620
>>XP_016865665 (OMIM: 616686) PREDICTED: heterogeneous n (605 aa)
initn: 2900 init1: 2505 opt: 3394 Z-score: 1695.8 bits: 323.9 E(85289): 1e-87
Smith-Waterman score: 3394; 82.1% identity (93.3% similar) in 610 aa overlap (1-607:1-598)
10 20 30 40 50
pF1KB5 MANQ-VNGNAVQLKEEEEPMDTSS-VTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYV
::.. ::::.. ::::::.: : :.:...::..:::::::::.::::. .::::.
XP_016 MATEHVNGNGT-----EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHS
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES
:::::::.::.::::.:::.::::::.:::::::::::::::::::::::::::.:: .:
XP_016 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 TKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYE
.::::::::::::::::::::::::::::::::::::::: ::..:::.:::::::::.:
XP_016 SKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 DELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLG
:::::::::::::::::::::::.: ::::::.::: :::::::::: ...::: :::.:
XP_016 DELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 VCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYED
:::::::::::::::::.::::.::::::::::::.::::::::::::::::::::::::
XP_016 VCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYED
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 HKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILE
::.::::::::::::::::::: :::::::.:.::::::::::::::::::.::::::::
XP_016 HKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILE
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 KSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKE
:.::.:::::::::::::::.::..: .:::::.:::::..:::.::::.:::::.::::
XP_016 KAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKE
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB5 RQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYD
:.: :::... :.::::. ::.:::: ::::::: :::::::::::::::::: :::::
XP_016 RKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG-RGGYGYPPDYYGYEDYYD-YYGYD
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB5 YHDYRGGYEDPYYGYDDGYAVRGRG-GGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLG
::.::::::::::::.: . : .:: ::::.::: : ::::: ::::::::::::.: :
XP_016 YHNYRGGYEDPYYGYED-FQVGARGRGGRGARGAAPS-RGRGAAPPRGRAGYSQRGGP-G
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB5 PPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQ
:: ::.::: :::::::: ::.::.::::::::::::::::::::::::::: :::::
XP_016 SARGVRGARGG-AQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQ-NWGSQ
540 550 560 570 580
600 610 620 630
pF1KB5 PIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
:::::::: :
XP_016 PIAQQPLQAGKRGRGRS
590 600
>>XP_016865666 (OMIM: 616686) PREDICTED: heterogeneous n (604 aa)
initn: 2783 init1: 2505 opt: 3387 Z-score: 1692.4 bits: 323.3 E(85289): 1.6e-87
Smith-Waterman score: 3387; 82.2% identity (93.4% similar) in 608 aa overlap (1-605:1-596)
10 20 30 40 50
pF1KB5 MANQ-VNGNAVQLKEEEEPMDTSS-VTHTEHYKTLIEAGLPQKVAERLDEIFQTGLVAYV
::.. ::::.. ::::::.: : :.:...::..:::::::::.::::. .::::.
XP_016 MATEHVNGNGT-----EEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHS
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 DLDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQES
:::::::.::.::::.:::.::::::.:::::::::::::::::::::::::::.:: .:
XP_016 DLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB5 TKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYE
.::::::::::::::::::::::::::::::::::::::: ::..:::.:::::::::.:
XP_016 SKGPDEAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 DELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLG
:::::::::::::::::::::::.: ::::::.::: :::::::::: ...::: :::.:
XP_016 DELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 VCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYED
:::::::::::::::::.::::.::::::::::::.::::::::::::::::::::::::
XP_016 VCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYED
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 HKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILE
::.::::::::::::::::::: :::::::.:.::::::::::::::::::.::::::::
XP_016 HKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILE
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 KSFSEFGKLERVKKLKDYAFVHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKE
:.::.:::::::::::::::.::..: .:::::.:::::..:::.::::.:::::.::::
XP_016 KAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKE
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB5 RQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRGGGRGGYGYPPDYYGYEDYYDDYYGYD
:.: :::... :.::::. ::.:::: ::::::: :::::::::::::::::: :::::
XP_016 RKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG-RGGYGYPPDYYGYEDYYD-YYGYD
420 430 440 450 460 470
480 490 500 510 520 530
pF1KB5 YHDYRGGYEDPYYGYDDGYAVRGRG-GGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLG
::.::::::::::::.: . : .:: ::::.::: : ::::: ::::::::::::.: :
XP_016 YHNYRGGYEDPYYGYED-FQVGARGRGGRGARGAAPS-RGRGAAPPRGRAGYSQRGGP-G
480 490 500 510 520 530
540 550 560 570 580 590
pF1KB5 PPRGSRGGRGGPAQQQRGRGSRGSRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQ
:: ::.::: :::::::: ::.::.::::::::::::::::::::::::::: :::::
XP_016 SARGVRGARGG-AQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQ-NWGSQ
540 550 560 570 580
600 610 620 630
pF1KB5 PIAQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
::::::::
XP_016 PIAQQPLQGKRGRGRS
590 600
633 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 17:18:03 2016 done: Thu Nov 3 17:18:05 2016
Total Scan time: 12.120 Total Display time: 0.170
Function used was FASTA [36.3.4 Apr, 2011]