Result of FASTA (omim) for
pF1KB5384
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5384, 206 aa
1>>>pF1KB5384 206 - 206 aa - 206 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2524+/-0.000376; mu= 10.3561+/- 0.023
mean_var=107.1706+/-20.751, 0's: 0 Z-trim(114.8): 52 B-trim: 33 in 1/54
Lambda= 0.123890
statistics sampled from 24784 (24830) to 24784 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.291), width: 16
Scan time: 5.630
The best scores are: opt bits E(85289)
NP_001309832 (OMIM: 600322,616330) synaptosomal-as ( 206) 1345 250.6 1.3e-66
NP_001309833 (OMIM: 600322,616330) synaptosomal-as ( 206) 1345 250.6 1.3e-66
NP_001309836 (OMIM: 600322,616330) synaptosomal-as ( 206) 1345 250.6 1.3e-66
XP_005260865 (OMIM: 600322,616330) PREDICTED: syna ( 206) 1345 250.6 1.3e-66
NP_001309839 (OMIM: 600322,616330) synaptosomal-as ( 206) 1345 250.6 1.3e-66
NP_001309838 (OMIM: 600322,616330) synaptosomal-as ( 206) 1345 250.6 1.3e-66
NP_001309835 (OMIM: 600322,616330) synaptosomal-as ( 206) 1345 250.6 1.3e-66
NP_001309834 (OMIM: 600322,616330) synaptosomal-as ( 206) 1345 250.6 1.3e-66
NP_001309837 (OMIM: 600322,616330) synaptosomal-as ( 206) 1345 250.6 1.3e-66
NP_570824 (OMIM: 600322,616330) synaptosomal-assoc ( 206) 1345 250.6 1.3e-66
NP_003072 (OMIM: 600322,616330) synaptosomal-assoc ( 206) 1292 241.1 9.5e-64
XP_016883510 (OMIM: 600322,616330) PREDICTED: syna ( 206) 1292 241.1 9.5e-64
NP_001309831 (OMIM: 600322,616330) synaptosomal-as ( 206) 1292 241.1 9.5e-64
XP_016883511 (OMIM: 600322,616330) PREDICTED: syna ( 206) 1292 241.1 9.5e-64
XP_016883512 (OMIM: 600322,616330) PREDICTED: syna ( 136) 898 170.6 1.1e-42
NP_003816 (OMIM: 602534) synaptosomal-associated p ( 211) 488 97.4 1.8e-20
XP_016878182 (OMIM: 602534) PREDICTED: synaptosoma ( 213) 484 96.7 2.9e-20
XP_016878183 (OMIM: 602534) PREDICTED: synaptosoma ( 213) 484 96.7 2.9e-20
NP_570710 (OMIM: 602534) synaptosomal-associated p ( 158) 428 86.6 2.4e-17
XP_006720788 (OMIM: 602534) PREDICTED: synaptosoma ( 222) 417 84.7 1.2e-16
XP_016878181 (OMIM: 602534) PREDICTED: synaptosoma ( 224) 417 84.7 1.2e-16
>>NP_001309832 (OMIM: 600322,616330) synaptosomal-associ (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
NP_001 IMEKADSNKTRIDEANQRATKMLGSG
190 200
>>NP_001309833 (OMIM: 600322,616330) synaptosomal-associ (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
NP_001 IMEKADSNKTRIDEANQRATKMLGSG
190 200
>>NP_001309836 (OMIM: 600322,616330) synaptosomal-associ (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
NP_001 IMEKADSNKTRIDEANQRATKMLGSG
190 200
>>XP_005260865 (OMIM: 600322,616330) PREDICTED: synaptos (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
XP_005 IMEKADSNKTRIDEANQRATKMLGSG
190 200
>>NP_001309839 (OMIM: 600322,616330) synaptosomal-associ (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
NP_001 IMEKADSNKTRIDEANQRATKMLGSG
190 200
>>NP_001309838 (OMIM: 600322,616330) synaptosomal-associ (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
NP_001 IMEKADSNKTRIDEANQRATKMLGSG
190 200
>>NP_001309835 (OMIM: 600322,616330) synaptosomal-associ (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
NP_001 IMEKADSNKTRIDEANQRATKMLGSG
190 200
>>NP_001309834 (OMIM: 600322,616330) synaptosomal-associ (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
NP_001 IMEKADSNKTRIDEANQRATKMLGSG
190 200
>>NP_001309837 (OMIM: 600322,616330) synaptosomal-associ (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
NP_001 IMEKADSNKTRIDEANQRATKMLGSG
190 200
>>NP_570824 (OMIM: 600322,616330) synaptosomal-associate (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1316.7 bits: 250.6 E(85289): 1.3e-66
Smith-Waterman score: 1345; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KB5 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 EEGMDQINKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 VDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDR
130 140 150 160 170 180
190 200
pF1KB5 IMEKADSNKTRIDEANQRATKMLGSG
::::::::::::::::::::::::::
NP_570 IMEKADSNKTRIDEANQRATKMLGSG
190 200
206 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:42:20 2016 done: Fri Nov 4 03:42:21 2016
Total Scan time: 5.630 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]