Result of FASTA (omim) for
pF1KB5378
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5378, 739 aa
1>>>pF1KB5378 739 - 739 aa - 739 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9269+/-0.000434; mu= 16.5866+/- 0.027
mean_var=73.1815+/-15.070, 0's: 0 Z-trim(111.0): 88 B-trim: 944 in 1/52
Lambda= 0.149925
statistics sampled from 19348 (19439) to 19348 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.228), width: 16
Scan time: 12.100
The best scores are: opt bits E(85289)
NP_001240781 (OMIM: 607245,614066) AP-4 complex su ( 739) 4916 1073.3 0
NP_006585 (OMIM: 607245,614066) AP-4 complex subun ( 739) 4916 1073.3 0
XP_016855577 (OMIM: 607245,614066) PREDICTED: AP-4 ( 700) 4655 1016.8 0
NP_001240782 (OMIM: 607245,614066) AP-4 complex su ( 640) 4254 930.1 0
XP_011538826 (OMIM: 607245,614066) PREDICTED: AP-4 ( 664) 4178 913.6 0
XP_011538825 (OMIM: 607245,614066) PREDICTED: AP-4 ( 664) 4178 913.6 0
NP_001295241 (OMIM: 607245,614066) AP-4 complex su ( 571) 3556 779.1 0
XP_016855579 (OMIM: 607245,614066) PREDICTED: AP-4 ( 571) 3556 779.1 0
XP_011538827 (OMIM: 607245,614066) PREDICTED: AP-4 ( 646) 3556 779.1 0
XP_016855582 (OMIM: 607245,614066) PREDICTED: AP-4 ( 405) 2643 581.5 2.2e-165
XP_016855578 (OMIM: 607245,614066) PREDICTED: AP-4 ( 635) 2642 581.4 3.8e-165
XP_016855581 (OMIM: 607245,614066) PREDICTED: AP-4 ( 414) 2446 538.9 1.5e-152
XP_011538830 (OMIM: 607245,614066) PREDICTED: AP-4 ( 414) 2446 538.9 1.5e-152
XP_016855580 (OMIM: 607245,614066) PREDICTED: AP-4 ( 542) 1573 350.2 1.3e-95
XP_016879776 (OMIM: 601025) PREDICTED: AP-2 comple ( 733) 1026 231.9 7.2e-60
XP_005257998 (OMIM: 601025) PREDICTED: AP-2 comple ( 733) 1026 231.9 7.2e-60
XP_016879773 (OMIM: 601025) PREDICTED: AP-2 comple ( 937) 1026 231.9 9e-60
NP_001273 (OMIM: 601025) AP-2 complex subunit beta ( 937) 1026 231.9 9e-60
NP_001025177 (OMIM: 601025) AP-2 complex subunit b ( 951) 1026 231.9 9.1e-60
XP_005257995 (OMIM: 601025) PREDICTED: AP-2 comple ( 951) 1026 231.9 9.1e-60
XP_005257994 (OMIM: 601025) PREDICTED: AP-2 comple ( 951) 1026 231.9 9.1e-60
XP_011522753 (OMIM: 601025) PREDICTED: AP-2 comple ( 969) 1026 231.9 9.3e-60
XP_011522751 (OMIM: 601025) PREDICTED: AP-2 comple ( 983) 1026 231.9 9.4e-60
XP_011522752 (OMIM: 601025) PREDICTED: AP-2 comple ( 983) 1026 231.9 9.4e-60
XP_011522750 (OMIM: 601025) PREDICTED: AP-2 comple ( 983) 1026 231.9 9.4e-60
NP_001159491 (OMIM: 600157) AP-1 complex subunit b ( 919) 996 225.4 7.9e-58
NP_663782 (OMIM: 600157) AP-1 complex subunit beta ( 939) 996 225.4 8.1e-58
NP_001118 (OMIM: 600157) AP-1 complex subunit beta ( 949) 996 225.4 8.2e-58
XP_011522757 (OMIM: 601025) PREDICTED: AP-2 comple ( 880) 962 218.1 1.3e-55
XP_016879775 (OMIM: 601025) PREDICTED: AP-2 comple ( 880) 962 218.1 1.3e-55
XP_016879774 (OMIM: 601025) PREDICTED: AP-2 comple ( 894) 962 218.1 1.3e-55
XP_011522756 (OMIM: 601025) PREDICTED: AP-2 comple ( 926) 962 218.1 1.3e-55
XP_011522755 (OMIM: 601025) PREDICTED: AP-2 comple ( 926) 962 218.1 1.3e-55
XP_011522754 (OMIM: 601025) PREDICTED: AP-2 comple ( 926) 962 218.1 1.3e-55
NP_001265440 (OMIM: 602166) AP-3 complex subunit b (1050) 389 94.2 3e-18
XP_016878130 (OMIM: 602166) PREDICTED: AP-3 comple ( 629) 344 84.3 1.6e-15
XP_016878129 (OMIM: 602166) PREDICTED: AP-3 comple (1058) 344 84.4 2.6e-15
NP_004635 (OMIM: 602166) AP-3 complex subunit beta (1082) 344 84.4 2.6e-15
NP_001265441 (OMIM: 602166) AP-3 complex subunit b (1101) 344 84.4 2.6e-15
XP_005248676 (OMIM: 603401,608233) PREDICTED: AP-3 ( 871) 327 80.7 2.7e-14
XP_016865490 (OMIM: 603401,608233) PREDICTED: AP-3 (1004) 327 80.7 3.1e-14
NP_001258698 (OMIM: 603401,608233) AP-3 complex su (1045) 327 80.8 3.2e-14
XP_005248675 (OMIM: 603401,608233) PREDICTED: AP-3 (1053) 327 80.8 3.3e-14
NP_003655 (OMIM: 603401,608233) AP-3 complex subun (1094) 327 80.8 3.4e-14
NP_057212 (OMIM: 615525) coatomer subunit gamma-1 ( 874) 240 61.9 1.3e-08
NP_057535 (OMIM: 600959) coatomer subunit beta [Ho ( 953) 163 45.3 0.0014
NP_001137534 (OMIM: 600959) coatomer subunit beta ( 953) 163 45.3 0.0014
NP_001137533 (OMIM: 600959) coatomer subunit beta ( 953) 163 45.3 0.0014
>>NP_001240781 (OMIM: 607245,614066) AP-4 complex subuni (739 aa)
initn: 4916 init1: 4916 opt: 4916 Z-score: 5743.0 bits: 1073.3 E(85289): 0
Smith-Waterman score: 4916; 99.9% identity (99.9% similar) in 739 aa overlap (1-739:1-739)
10 20 30 40 50 60
pF1KB5 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
670 680 690 700 710 720
730
pF1KB5 NSFISVLETVIGTIEEIKS
:::::::::::::::::::
NP_001 NSFISVLETVIGTIEEIKS
730
>>NP_006585 (OMIM: 607245,614066) AP-4 complex subunit b (739 aa)
initn: 4916 init1: 4916 opt: 4916 Z-score: 5743.0 bits: 1073.3 E(85289): 0
Smith-Waterman score: 4916; 99.9% identity (99.9% similar) in 739 aa overlap (1-739:1-739)
10 20 30 40 50 60
pF1KB5 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB5 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB5 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB5 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
670 680 690 700 710 720
730
pF1KB5 NSFISVLETVIGTIEEIKS
:::::::::::::::::::
NP_006 NSFISVLETVIGTIEEIKS
730
>>XP_016855577 (OMIM: 607245,614066) PREDICTED: AP-4 com (700 aa)
initn: 4655 init1: 4655 opt: 4655 Z-score: 5438.3 bits: 1016.8 E(85289): 0
Smith-Waterman score: 4655; 99.9% identity (99.9% similar) in 700 aa overlap (40-739:1-700)
10 20 30 40 50 60
pF1KB5 VKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATVDIVQKKLVY
::::::::::::::::::::::::::::::
XP_016 MTQGLDMSGVFMEMVKASATVDIVQKKLVY
10 20 30
70 80 90 100 110 120
pF1KB5 LYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 RDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQ
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 EGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSP
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 GVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPG
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 HFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIF
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 AIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEEN
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB5 IQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTASLRLFLSRPA
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
XP_016 IQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPA
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB5 ECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDPTLGLLEDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDPTLGLLEDPA
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB5 ERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPLIPEENKERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPLIPEENKERV
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB5 QELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMALQVVNIQTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMALQVVNIQTI
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB5 AMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETLNSFISVLET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETLNSFISVLET
640 650 660 670 680 690
730
pF1KB5 VIGTIEEIKS
::::::::::
XP_016 VIGTIEEIKS
700
>>NP_001240782 (OMIM: 607245,614066) AP-4 complex subuni (640 aa)
initn: 4254 init1: 4254 opt: 4254 Z-score: 4970.1 bits: 930.1 E(85289): 0
Smith-Waterman score: 4254; 99.8% identity (99.8% similar) in 640 aa overlap (100-739:1-640)
70 80 90 100 110 120
pF1KB5 LYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGL
::::::::::::::::::::::::::::::
NP_001 MVRGLALRSMCSLRMPGVQEYIQQPILNGL
10 20 30
130 140 150 160 170 180
pF1KB5 RDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQ
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB5 EGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSP
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB5 GVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPG
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB5 HFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIF
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB5 AIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEEN
280 290 300 310 320 330
430 440 450 460 470 480
pF1KB5 IQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTASLRLFLSRPA
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
NP_001 IQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPA
340 350 360 370 380 390
490 500 510 520 530 540
pF1KB5 ECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDPTLGLLEDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDPTLGLLEDPA
400 410 420 430 440 450
550 560 570 580 590 600
pF1KB5 ERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPLIPEENKERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPLIPEENKERV
460 470 480 490 500 510
610 620 630 640 650 660
pF1KB5 QELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMALQVVNIQTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMALQVVNIQTI
520 530 540 550 560 570
670 680 690 700 710 720
pF1KB5 AMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETLNSFISVLET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETLNSFISVLET
580 590 600 610 620 630
730
pF1KB5 VIGTIEEIKS
::::::::::
NP_001 VIGTIEEIKS
640
>>XP_011538826 (OMIM: 607245,614066) PREDICTED: AP-4 com (664 aa)
initn: 4172 init1: 4172 opt: 4178 Z-score: 4881.0 bits: 913.6 E(85289): 0
Smith-Waterman score: 4256; 89.7% identity (89.7% similar) in 739 aa overlap (1-739:1-664)
10 20 30 40 50 60
pF1KB5 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
::::::::::::::::::::::::::::::::::::::
XP_011 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIR----------------------
10 20 30
70 80 90 100 110 120
pF1KB5 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
:::::::
XP_011 -----------------------------------------------------MPGVQEY
40
130 140 150 160 170 180
pF1KB5 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB5 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB5 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB5 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB5 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB5 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAL
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB5 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
410 420 430 440 450 460
550 560 570 580 590 600
pF1KB5 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
470 480 490 500 510 520
610 620 630 640 650 660
pF1KB5 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
530 540 550 560 570 580
670 680 690 700 710 720
pF1KB5 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
590 600 610 620 630 640
730
pF1KB5 NSFISVLETVIGTIEEIKS
:::::::::::::::::::
XP_011 NSFISVLETVIGTIEEIKS
650 660
>>XP_011538825 (OMIM: 607245,614066) PREDICTED: AP-4 com (664 aa)
initn: 4172 init1: 4172 opt: 4178 Z-score: 4881.0 bits: 913.6 E(85289): 0
Smith-Waterman score: 4256; 89.7% identity (89.7% similar) in 739 aa overlap (1-739:1-664)
10 20 30 40 50 60
pF1KB5 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
::::::::::::::::::::::::::::::::::::::
XP_011 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIR----------------------
10 20 30
70 80 90 100 110 120
pF1KB5 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
:::::::
XP_011 -----------------------------------------------------MPGVQEY
40
130 140 150 160 170 180
pF1KB5 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB5 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB5 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB5 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB5 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
290 300 310 320 330 340
430 440 450 460 470 480
pF1KB5 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAL
350 360 370 380 390 400
490 500 510 520 530 540
pF1KB5 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
410 420 430 440 450 460
550 560 570 580 590 600
pF1KB5 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
470 480 490 500 510 520
610 620 630 640 650 660
pF1KB5 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
530 540 550 560 570 580
670 680 690 700 710 720
pF1KB5 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
590 600 610 620 630 640
730
pF1KB5 NSFISVLETVIGTIEEIKS
:::::::::::::::::::
XP_011 NSFISVLETVIGTIEEIKS
650 660
>>NP_001295241 (OMIM: 607245,614066) AP-4 complex subuni (571 aa)
initn: 3556 init1: 3556 opt: 3556 Z-score: 4155.0 bits: 779.1 E(85289): 0
Smith-Waterman score: 3556; 99.8% identity (99.8% similar) in 534 aa overlap (206-739:38-571)
180 190 200 210 220 230
pF1KB5 VVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFD
::::::::::::::::::::::::::::::
NP_001 DVVKELKKALCNPHIQADRLRYRNVIQRVIRMSKLDQWGQAEVLNFLLRYQPRSEEELFD
10 20 30 40 50 60
240 250 260 270 280 290
pF1KB5 ILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFV
70 80 90 100 110 120
300 310 320 330 340 350
pF1KB5 ALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGY
130 140 150 160 170 180
360 370 380 390 400 410
pF1KB5 CTDVSADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CTDVSADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQC
190 200 210 220 230 240
420 430 440 450 460 470
pF1KB5 TEAVCQALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEAVCQALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKME
250 260 270 280 290 300
480 490 500 510 520 530
pF1KB5 LLTASLRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCS
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLTALLRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCS
310 320 330 340 350 360
540 550 560 570 580 590
pF1KB5 PKSDPTLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKSDPTLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFA
370 380 390 400 410 420
600 610 620 630 640 650
pF1KB5 ASGPLIPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASGPLIPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPD
430 440 450 460 470 480
660 670 680 690 700 710
pF1KB5 TLQMALQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLQMALQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEA
490 500 510 520 530 540
720 730
pF1KB5 RTETLNSFISVLETVIGTIEEIKS
::::::::::::::::::::::::
NP_001 RTETLNSFISVLETVIGTIEEIKS
550 560 570
>--
initn: 246 init1: 246 opt: 246 Z-score: 285.7 bits: 63.1 E(85289): 3.5e-09
Smith-Waterman score: 246; 100.0% identity (100.0% similar) in 37 aa overlap (1-37:1-37)
10 20 30 40 50 60
pF1KB5 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
:::::::::::::::::::::::::::::::::::::
NP_001 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRMSKLDQWGQAEVLNFLLRYQPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
NP_001 SEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSE
70 80 90 100 110 120
>>XP_016855579 (OMIM: 607245,614066) PREDICTED: AP-4 com (571 aa)
initn: 3556 init1: 3556 opt: 3556 Z-score: 4155.0 bits: 779.1 E(85289): 0
Smith-Waterman score: 3556; 99.8% identity (99.8% similar) in 534 aa overlap (206-739:38-571)
180 190 200 210 220 230
pF1KB5 VVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFD
::::::::::::::::::::::::::::::
XP_016 DVVKELKKALCNPHIQADRLRYRNVIQRVIRMSKLDQWGQAEVLNFLLRYQPRSEEELFD
10 20 30 40 50 60
240 250 260 270 280 290
pF1KB5 ILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFV
70 80 90 100 110 120
300 310 320 330 340 350
pF1KB5 ALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGY
130 140 150 160 170 180
360 370 380 390 400 410
pF1KB5 CTDVSADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CTDVSADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQC
190 200 210 220 230 240
420 430 440 450 460 470
pF1KB5 TEAVCQALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TEAVCQALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKME
250 260 270 280 290 300
480 490 500 510 520 530
pF1KB5 LLTASLRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCS
:::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLTALLRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCS
310 320 330 340 350 360
540 550 560 570 580 590
pF1KB5 PKSDPTLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKSDPTLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFA
370 380 390 400 410 420
600 610 620 630 640 650
pF1KB5 ASGPLIPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASGPLIPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPD
430 440 450 460 470 480
660 670 680 690 700 710
pF1KB5 TLQMALQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLQMALQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEA
490 500 510 520 530 540
720 730
pF1KB5 RTETLNSFISVLETVIGTIEEIKS
::::::::::::::::::::::::
XP_016 RTETLNSFISVLETVIGTIEEIKS
550 560 570
>--
initn: 246 init1: 246 opt: 246 Z-score: 285.7 bits: 63.1 E(85289): 3.5e-09
Smith-Waterman score: 246; 100.0% identity (100.0% similar) in 37 aa overlap (1-37:1-37)
10 20 30 40 50 60
pF1KB5 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
:::::::::::::::::::::::::::::::::::::
XP_016 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRMSKLDQWGQAEVLNFLLRYQPR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
XP_016 SEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSE
70 80 90 100 110 120
>>XP_011538827 (OMIM: 607245,614066) PREDICTED: AP-4 com (646 aa)
initn: 3556 init1: 3556 opt: 3556 Z-score: 4154.1 bits: 779.1 E(85289): 0
Smith-Waterman score: 4106; 87.3% identity (87.3% similar) in 739 aa overlap (1-739:1-646)
10 20 30 40 50 60
pF1KB5 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRM------
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
XP_011 ------------------------------------------------------------
190 200 210 220 230 240
pF1KB5 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
:::::::::::::::::::::::::::::::::
XP_011 ---------------------------SKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
120 130 140
250 260 270 280 290 300
pF1KB5 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
150 160 170 180 190 200
310 320 330 340 350 360
pF1KB5 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
210 220 230 240 250 260
370 380 390 400 410 420
pF1KB5 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
270 280 290 300 310 320
430 440 450 460 470 480
pF1KB5 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAL
330 340 350 360 370 380
490 500 510 520 530 540
pF1KB5 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRLFLSRPAECQDMLGRLLYYCIEEEKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDP
390 400 410 420 430 440
550 560 570 580 590 600
pF1KB5 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLGLLEDPAERPVNSWASDFNTLVPVYGKAHWATISKCQGAERCDPELPKTSSFAASGPL
450 460 470 480 490 500
610 620 630 640 650 660
pF1KB5 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPEENKERVQELPDSGALMLVPNRQLTADYFEKTWLSLKVAHQQVLPWRGEFHPDTLQMA
510 520 530 540 550 560
670 680 690 700 710 720
pF1KB5 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQVVNIQTIAMSRAGSRPWKAYLSAQDDTGCLFLTELLLEPGNSEMQISVKQNEARTETL
570 580 590 600 610 620
730
pF1KB5 NSFISVLETVIGTIEEIKS
:::::::::::::::::::
XP_011 NSFISVLETVIGTIEEIKS
630 640
>>XP_016855582 (OMIM: 607245,614066) PREDICTED: AP-4 com (405 aa)
initn: 2643 init1: 2643 opt: 2643 Z-score: 3090.1 bits: 581.5 E(85289): 2.2e-165
Smith-Waterman score: 2643; 99.5% identity (99.8% similar) in 401 aa overlap (1-401:1-401)
10 20 30 40 50 60
pF1KB5 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRYMTQGLDMSGVFMEMVKASATV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSLEEILKQEGGVVINKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSFLKSSSPGVVMGATKLFLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVC
::::::::::::::::::::::::::::::::::::::: .
XP_016 ADFAQAAIFAIGGIARTYTDQCVQILTELLGLRQEHITTEIQPES
370 380 390 400
430 440 450 460 470 480
pF1KB5 QALPGCEENIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTAS
739 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:30:05 2016 done: Thu Nov 3 22:30:07 2016
Total Scan time: 12.100 Total Display time: 0.200
Function used was FASTA [36.3.4 Apr, 2011]