Result of FASTA (omim) for
pF1KB5377
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5377, 340 aa
1>>>pF1KB5377 340 - 340 aa - 340 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7334+/-0.00032; mu= 15.6427+/- 0.020
mean_var=96.6471+/-19.369, 0's: 0 Z-trim(118.4): 114 B-trim: 0 in 0/54
Lambda= 0.130461
statistics sampled from 31287 (31408) to 31287 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.368), width: 16
Scan time: 8.350
The best scores are: opt bits E(85289)
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B ( 340) 2322 446.9 2.9e-125
XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 1639 318.2 1.1e-86
NP_001300893 (OMIM: 604572) dnaJ homolog subfamily ( 240) 1639 318.2 1.1e-86
NP_001287843 (OMIM: 604572) dnaJ homolog subfamily ( 240) 1639 318.2 1.1e-86
XP_011526258 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 1639 318.2 1.1e-86
XP_006722797 (OMIM: 604572) PREDICTED: dnaJ homolo ( 240) 1639 318.2 1.1e-86
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B ( 337) 1583 307.8 2.2e-83
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337) 1583 307.8 2.2e-83
XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 1364 266.6 5.6e-71
XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 1364 266.6 5.6e-71
NP_036398 (OMIM: 611328) dnaJ homolog subfamily B ( 348) 1364 266.6 5.6e-71
XP_011516144 (OMIM: 611328) PREDICTED: dnaJ homolo ( 420) 1364 266.7 6.5e-71
NP_001128477 (OMIM: 611328) dnaJ homolog subfamily ( 420) 1364 266.7 6.5e-71
NP_001128476 (OMIM: 611328) dnaJ homolog subfamily ( 462) 1364 266.7 7e-71
NP_001304029 (OMIM: 611327) dnaJ homolog subfamily ( 297) 1209 237.4 3e-62
NP_001304030 (OMIM: 611327) dnaJ homolog subfamily ( 222) 1019 201.5 1.4e-51
NP_001304031 (OMIM: 611327) dnaJ homolog subfamily ( 222) 1019 201.5 1.4e-51
XP_011543306 (OMIM: 610263,617091) PREDICTED: dnaJ ( 350) 685 138.8 1.7e-32
XP_016873165 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 679 137.6 2.9e-32
XP_016873167 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 679 137.6 2.9e-32
XP_011543311 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 679 137.6 2.9e-32
XP_011543309 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 679 137.6 2.9e-32
XP_016873166 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 679 137.6 2.9e-32
XP_016873164 (OMIM: 610263,617091) PREDICTED: dnaJ ( 258) 679 137.6 2.9e-32
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316) 679 137.6 3.4e-32
XP_005274041 (OMIM: 610263,617091) PREDICTED: dnaJ ( 262) 647 131.5 1.9e-30
XP_011543307 (OMIM: 610263,617091) PREDICTED: dnaJ ( 296) 647 131.6 2.1e-30
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A ( 397) 597 122.3 1.8e-27
XP_011543317 (OMIM: 610263,617091) PREDICTED: dnaJ ( 175) 511 105.8 7.2e-23
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241) 420 88.8 1.3e-17
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257) 420 88.8 1.4e-17
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326) 420 88.9 1.6e-17
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 420 88.9 1.7e-17
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 420 88.9 1.7e-17
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 420 88.9 1.7e-17
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211) 410 86.9 4.4e-17
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277) 395 84.1 3.8e-16
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily ( 77) 387 82.2 4.1e-16
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324) 395 84.2 4.3e-16
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A ( 412) 396 84.5 4.5e-16
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453) 378 81.1 5e-15
NP_005138 (OMIM: 608382) dnaJ homolog subfamily A ( 480) 378 81.1 5.3e-15
NP_001300968 (OMIM: 602837) dnaJ homolog subfamily ( 240) 367 78.8 1.3e-14
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409) 354 76.6 1.1e-13
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409) 354 76.6 1.1e-13
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B ( 409) 354 76.6 1.1e-13
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411) 354 76.6 1.1e-13
XP_011543315 (OMIM: 610263,617091) PREDICTED: dnaJ ( 246) 350 75.6 1.2e-13
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B ( 309) 351 75.9 1.3e-13
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B ( 232) 349 75.4 1.3e-13
>>NP_006136 (OMIM: 604572) dnaJ homolog subfamily B memb (340 aa)
initn: 2322 init1: 2322 opt: 2322 Z-score: 2369.8 bits: 446.9 E(85289): 2.9e-125
Smith-Waterman score: 2322; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)
10 20 30 40 50 60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 GEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 KKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGE
250 260 270 280 290 300
310 320 330 340
pF1KB5 GLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
::::::::::::::::::::::::::::::::::::::::
NP_006 GLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
310 320 330 340
>>XP_006722796 (OMIM: 604572) PREDICTED: dnaJ homolog su (240 aa)
initn: 1639 init1: 1639 opt: 1639 Z-score: 1677.1 bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)
80 90 100 110 120 130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
::::::::::::::::::::::::::::::
XP_006 MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
10 20 30
140 150 160 170 180 190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
160 170 180 190 200 210
320 330 340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
::::::::::::::::::::::::::::::
XP_006 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
220 230 240
>>NP_001300893 (OMIM: 604572) dnaJ homolog subfamily B m (240 aa)
initn: 1639 init1: 1639 opt: 1639 Z-score: 1677.1 bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)
80 90 100 110 120 130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
::::::::::::::::::::::::::::::
NP_001 MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
10 20 30
140 150 160 170 180 190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
160 170 180 190 200 210
320 330 340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
::::::::::::::::::::::::::::::
NP_001 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
220 230 240
>>NP_001287843 (OMIM: 604572) dnaJ homolog subfamily B m (240 aa)
initn: 1639 init1: 1639 opt: 1639 Z-score: 1677.1 bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)
80 90 100 110 120 130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
::::::::::::::::::::::::::::::
NP_001 MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
10 20 30
140 150 160 170 180 190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
160 170 180 190 200 210
320 330 340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
::::::::::::::::::::::::::::::
NP_001 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
220 230 240
>>XP_011526258 (OMIM: 604572) PREDICTED: dnaJ homolog su (240 aa)
initn: 1639 init1: 1639 opt: 1639 Z-score: 1677.1 bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)
80 90 100 110 120 130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
::::::::::::::::::::::::::::::
XP_011 MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
10 20 30
140 150 160 170 180 190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
160 170 180 190 200 210
320 330 340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
::::::::::::::::::::::::::::::
XP_011 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
220 230 240
>>XP_006722797 (OMIM: 604572) PREDICTED: dnaJ homolog su (240 aa)
initn: 1639 init1: 1639 opt: 1639 Z-score: 1677.1 bits: 318.2 E(85289): 1.1e-86
Smith-Waterman score: 1639; 100.0% identity (100.0% similar) in 240 aa overlap (101-340:1-240)
80 90 100 110 120 130
pF1KB5 GLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
::::::::::::::::::::::::::::::
XP_006 MFAEFFGGRNPFDTFFGQRNGEEGMDIDDP
10 20 30
140 150 160 170 180 190
pF1KB5 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISHKRL
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB5 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB5 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEK
160 170 180 190 200 210
320 330 340
pF1KB5 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
::::::::::::::::::::::::::::::
XP_006 RGDLIIEFEVIFPERIPQTSRTVLEQVLPI
220 230 240
>>NP_008965 (OMIM: 611327) dnaJ homolog subfamily B memb (337 aa)
initn: 1168 init1: 1168 opt: 1583 Z-score: 1618.2 bits: 307.8 E(85289): 2.2e-83
Smith-Waterman score: 1583; 66.3% identity (85.2% similar) in 344 aa overlap (1-339:1-335)
10 20 30 40 50 60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
:::::: ::. .:::::.::.:::.:::..:::::: : :::::::.::::.:::::.:
NP_008 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
:::.:..:::::::. .::. : .: .: ::::::::: :: :::: :::. :::.:
NP_008 REIYDQFGEEGLKGG--AGGTDG--QGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRM
70 80 90 100 110
130 140 150 160 170
pF1KB5 G----EEGMDID-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEI
: : :.:: ::::.: ..:.:. :.:.. :.: :::::: :.::::::::
NP_008 GGGRDSEEMEIDGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 YSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADI
::::::.::::.:::: ::.: :.::::::::.:::::::::::::.:::.: :.:::::
NP_008 YSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 VFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRR
::..::: : ::::::..:: :.::::::::::..::::::::.::. .:...:::::
NP_008 VFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRR
240 250 260 270 280 290
300 310 320 330 340
pF1KB5 KVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
.. : :::.::.:..::::.::::: ::. : ..:. ::.. ::
NP_008 RIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
300 310 320 330
>>NP_001304028 (OMIM: 611327) dnaJ homolog subfamily B m (337 aa)
initn: 1168 init1: 1168 opt: 1583 Z-score: 1618.2 bits: 307.8 E(85289): 2.2e-83
Smith-Waterman score: 1583; 66.3% identity (85.2% similar) in 344 aa overlap (1-339:1-335)
10 20 30 40 50 60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
:::::: ::. .:::::.::.:::.:::..:::::: : :::::::.::::.:::::.:
NP_001 MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 REIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRN
:::.:..:::::::. .::. : .: .: ::::::::: :: :::: :::. :::.:
NP_001 REIYDQFGEEGLKGG--AGGTDG--QGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRM
70 80 90 100 110
130 140 150 160 170
pF1KB5 G----EEGMDID-DPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEI
: : :.:: ::::.: ..:.:. :.:.. :.: :::::: :.::::::::
NP_001 GGGRDSEEMEIDGDPFSAFGFSMNGYP-----RDRNSVGPSRLKQDPPVIHELRVSLEEI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB5 YSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADI
::::::.::::.:::: ::.: :.::::::::.:::::::::::::.:::.: :.:::::
NP_001 YSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 VFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRR
::..::: : ::::::..:: :.::::::::::..::::::::.::. .:...:::::
NP_001 VFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRR
240 250 260 270 280 290
300 310 320 330 340
pF1KB5 KVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
.. : :::.::.:..::::.::::: ::. : ..:. ::.. ::
NP_001 RIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLPAS
300 310 320 330
>>XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolog su (348 aa)
initn: 1307 init1: 901 opt: 1364 Z-score: 1395.2 bits: 266.6 E(85289): 5.6e-71
Smith-Waterman score: 1496; 62.6% identity (81.3% similar) in 353 aa overlap (1-339:1-346)
10 20 30 40 50 60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
::::::. ::. ::...:::.:::..::.:::::::::.::::::::::::::::::.:
XP_006 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKK
10 20 30 40 50 60
70 80 90 100 110
pF1KB5 REIFDRYGEEGLK-GSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQR
: ..:.::::::: :.: ::::.: :: ::::::::: :: :::: :::: ::..
XP_006 RGLYDQYGEEGLKTGGGTSGGSSG-----SFHYTFHGDPHATFASFFGGSNPFDIFFASS
70 80 90 100 110
120 130 140 150 160
pF1KB5 NGE--------EGMDID---DPFSGFPMGMGGFTNVNFGRSRSAQE--PARKKQDPPVTH
. . ::.: :::..: : ::.... : :. . : :: :::::.:
XP_006 RSTRPFSGFDPDDMDVDEDEDPFGAF--GRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVH
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB5 DLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQ
.::::::::: : ::.:::...::::::...:.::::: : .:.:::::::::::::::
XP_006 ELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 TSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK
: .::::::::::::::: :.:::..:.: : :::.:::::::::.::.:::.::. .
XP_006 TPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCN
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
:::.:: ... :::::.::.: .:::::.::.: ::.:. .: .:.: ::
XP_006 DVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLPCS
300 310 320 330 340
>>XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolog su (348 aa)
initn: 1307 init1: 901 opt: 1364 Z-score: 1395.2 bits: 266.6 E(85289): 5.6e-71
Smith-Waterman score: 1496; 62.6% identity (81.3% similar) in 353 aa overlap (1-339:1-346)
10 20 30 40 50 60
pF1KB5 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRK
::::::. ::. ::...:::.:::..::.:::::::::.::::::::::::::::::.:
XP_005 MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKK
10 20 30 40 50 60
70 80 90 100 110
pF1KB5 REIFDRYGEEGLK-GSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQR
: ..:.::::::: :.: ::::.: :: ::::::::: :: :::: :::: ::..
XP_005 RGLYDQYGEEGLKTGGGTSGGSSG-----SFHYTFHGDPHATFASFFGGSNPFDIFFASS
70 80 90 100 110
120 130 140 150 160
pF1KB5 NGE--------EGMDID---DPFSGFPMGMGGFTNVNFGRSRSAQE--PARKKQDPPVTH
. . ::.: :::..: : ::.... : :. . : :: :::::.:
XP_005 RSTRPFSGFDPDDMDVDEDEDPFGAF--GRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVH
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB5 DLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQ
.::::::::: : ::.:::...::::::...:.::::: : .:.:::::::::::::::
XP_005 ELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 TSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK
: .::::::::::::::: :.:::..:.: : :::.:::::::::.::.:::.::. .
XP_005 TPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCN
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB5 DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI
:::.:: ... :::::.::.: .:::::.::.: ::.:. .: .:.: ::
XP_005 DVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLPCS
300 310 320 330 340
340 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 03:41:46 2016 done: Fri Nov 4 03:41:47 2016
Total Scan time: 8.350 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]