Result of FASTA (omim) for
pF1KB5370
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5370, 305 aa
1>>>pF1KB5370 305 - 305 aa - 305 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2377+/-0.000325; mu= 16.4171+/- 0.020
mean_var=71.1561+/-14.175, 0's: 0 Z-trim(117.3): 21 B-trim: 771 in 1/55
Lambda= 0.152044
statistics sampled from 29110 (29132) to 29110 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.342), width: 16
Scan time: 7.110
The best scores are: opt bits E(85289)
NP_057327 (OMIM: 608341) NADH-cytochrome b5 reduct ( 305) 2055 459.5 3.8e-129
NP_001123291 (OMIM: 250800,613213) NADH-cytochrome ( 278) 1272 287.7 1.8e-77
NP_015565 (OMIM: 250800,613213) NADH-cytochrome b5 ( 278) 1272 287.7 1.8e-77
NP_001165132 (OMIM: 250800,613213) NADH-cytochrome ( 278) 1272 287.7 1.8e-77
NP_000389 (OMIM: 250800,613213) NADH-cytochrome b5 ( 301) 1272 287.7 1.9e-77
NP_001165131 (OMIM: 250800,613213) NADH-cytochrome ( 334) 1272 287.8 2.1e-77
XP_011518486 (OMIM: 608342) PREDICTED: NADH-cytoch ( 336) 1214 275.0 1.4e-73
XP_016873409 (OMIM: 608342) PREDICTED: NADH-cytoch ( 336) 1214 275.0 1.4e-73
NP_057313 (OMIM: 608342) NADH-cytochrome b5 reduct ( 276) 1179 267.3 2.5e-71
NP_001289755 (OMIM: 608342) NADH-cytochrome b5 red ( 276) 1179 267.3 2.5e-71
XP_005253032 (OMIM: 608342) PREDICTED: NADH-cytoch ( 276) 1179 267.3 2.5e-71
XP_006718314 (OMIM: 608342) PREDICTED: NADH-cytoch ( 276) 1179 267.3 2.5e-71
XP_011518487 (OMIM: 608342) PREDICTED: NADH-cytoch ( 333) 922 211.0 2.7e-54
XP_016873410 (OMIM: 608342) PREDICTED: NADH-cytoch ( 258) 784 180.6 2.8e-45
XP_016873411 (OMIM: 608342) PREDICTED: NADH-cytoch ( 198) 749 172.9 4.7e-43
NP_001289756 (OMIM: 608342) NADH-cytochrome b5 red ( 230) 749 172.9 5.3e-43
NP_057314 (OMIM: 608343) cytochrome b5 reductase 4 ( 521) 206 54.1 7.2e-07
>>NP_057327 (OMIM: 608341) NADH-cytochrome b5 reductase (305 aa)
initn: 2055 init1: 2055 opt: 2055 Z-score: 2439.6 bits: 459.5 E(85289): 3.8e-129
Smith-Waterman score: 2055; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305)
10 20 30 40 50 60
pF1KB5 MGIQTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MGIQTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 TKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 TKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 VHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 MIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLW
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 FTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 FTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQK
250 260 270 280 290 300
pF1KB5 MRFTY
:::::
NP_057 MRFTY
>>NP_001123291 (OMIM: 250800,613213) NADH-cytochrome b5 (278 aa)
initn: 1296 init1: 1250 opt: 1272 Z-score: 1511.9 bits: 287.7 E(85289): 1.8e-77
Smith-Waterman score: 1272; 63.5% identity (85.9% similar) in 277 aa overlap (29-305:3-278)
10 20 30 40 50 60
pF1KB5 MGIQTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHN
: .:: : .:: .:. :: :::.:. .::.
NP_001 MKLFQRST-PAITLESPDIKYPLRLIDREIISHD
10 20 30
70 80 90 100 110 120
pF1KB5 TKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKG
:.:::::::. .: ::::::.:::::.::::.::.:::::..::.:.:.::::::::.:
NP_001 TRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKD
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 VHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLG
.::::: ::::::::.:...::..:::::::::.: :::.: :.:.::: : :..:..:
NP_001 THPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 MIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLW
:::::::::::::.::::.: :.: : : :::::::::::.:: .::::. .. :::::
NP_001 MIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLW
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 FTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQK
.:::. :. : :..:::. .:::.::: : .. :::.::::::.: :: ::::..:. .
NP_001 YTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTE
220 230 240 250 260 270
pF1KB5 MRFTY
:..
NP_001 RCFVF
>>NP_015565 (OMIM: 250800,613213) NADH-cytochrome b5 red (278 aa)
initn: 1296 init1: 1250 opt: 1272 Z-score: 1511.9 bits: 287.7 E(85289): 1.8e-77
Smith-Waterman score: 1272; 63.5% identity (85.9% similar) in 277 aa overlap (29-305:3-278)
10 20 30 40 50 60
pF1KB5 MGIQTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHN
: .:: : .:: .:. :: :::.:. .::.
NP_015 MKLFQRST-PAITLESPDIKYPLRLIDREIISHD
10 20 30
70 80 90 100 110 120
pF1KB5 TKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKG
:.:::::::. .: ::::::.:::::.::::.::.:::::..::.:.:.::::::::.:
NP_015 TRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKD
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 VHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLG
.::::: ::::::::.:...::..:::::::::.: :::.: :.:.::: : :..:..:
NP_015 THPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 MIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLW
:::::::::::::.::::.: :.: : : :::::::::::.:: .::::. .. :::::
NP_015 MIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLW
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 FTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQK
.:::. :. : :..:::. .:::.::: : .. :::.::::::.: :: ::::..:. .
NP_015 YTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTE
220 230 240 250 260 270
pF1KB5 MRFTY
:..
NP_015 RCFVF
>>NP_001165132 (OMIM: 250800,613213) NADH-cytochrome b5 (278 aa)
initn: 1296 init1: 1250 opt: 1272 Z-score: 1511.9 bits: 287.7 E(85289): 1.8e-77
Smith-Waterman score: 1272; 63.5% identity (85.9% similar) in 277 aa overlap (29-305:3-278)
10 20 30 40 50 60
pF1KB5 MGIQTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHN
: .:: : .:: .:. :: :::.:. .::.
NP_001 MKLFQRST-PAITLESPDIKYPLRLIDREIISHD
10 20 30
70 80 90 100 110 120
pF1KB5 TKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKG
:.:::::::. .: ::::::.:::::.::::.::.:::::..::.:.:.::::::::.:
NP_001 TRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKD
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 VHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLG
.::::: ::::::::.:...::..:::::::::.: :::.: :.:.::: : :..:..:
NP_001 THPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVG
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 MIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLW
:::::::::::::.::::.: :.: : : :::::::::::.:: .::::. .. :::::
NP_001 MIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLW
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 FTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQK
.:::. :. : :..:::. .:::.::: : .. :::.::::::.: :: ::::..:. .
NP_001 YTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTE
220 230 240 250 260 270
pF1KB5 MRFTY
:..
NP_001 RCFVF
>>NP_000389 (OMIM: 250800,613213) NADH-cytochrome b5 red (301 aa)
initn: 1296 init1: 1250 opt: 1272 Z-score: 1511.4 bits: 287.7 E(85289): 1.9e-77
Smith-Waterman score: 1272; 63.5% identity (85.9% similar) in 277 aa overlap (29-305:26-301)
10 20 30 40 50 60
pF1KB5 MGIQTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHN
: .:: : .:: .:. :: :::.:. .::.
NP_000 MGAQLSTLGHMVLFPVWFLYSLLMKLFQRST-PAITLESPDIKYPLRLIDREIISHD
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 TKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKG
:.:::::::. .: ::::::.:::::.::::.::.:::::..::.:.:.::::::::.:
NP_000 TRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 VHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLG
.::::: ::::::::.:...::..:::::::::.: :::.: :.:.::: : :..:..:
NP_000 THPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 MIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLW
:::::::::::::.::::.: :.: : : :::::::::::.:: .::::. .. :::::
NP_000 MIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLW
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 FTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQK
.:::. :. : :..:::. .:::.::: : .. :::.::::::.: :: ::::..:. .
NP_000 YTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTE
240 250 260 270 280 290
pF1KB5 MRFTY
:..
NP_000 RCFVF
300
>>NP_001165131 (OMIM: 250800,613213) NADH-cytochrome b5 (334 aa)
initn: 1296 init1: 1250 opt: 1272 Z-score: 1510.8 bits: 287.8 E(85289): 2.1e-77
Smith-Waterman score: 1272; 63.5% identity (85.9% similar) in 277 aa overlap (29-305:59-334)
10 20 30 40 50
pF1KB5 MGIQTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVS
: .:: : .:: .:. :: :::.:. .:
NP_001 DGLDVERAESWELGHMVLFPVWFLYSLLMKLFQRST-PAITLESPDIKYPLRLIDREIIS
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB5 HNTKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYL
:.:.:::::::. .: ::::::.:::::.::::.::.:::::..::.:.:.::::::::.
NP_001 HDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYF
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB5 KGVHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKK
: .::::: ::::::::.:...::..:::::::::.: :::.: :.:.::: : :..:.
NP_001 KDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKS
150 160 170 180 190 200
180 190 200 210 220 230
pF1KB5 LGMIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFK
.::::::::::::::.::::.: :.: : : :::::::::::.:: .::::. .. :::
NP_001 VGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFK
210 220 230 240 250 260
240 250 260 270 280 290
pF1KB5 LWFTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYS
::.:::. :. : :..:::. .:::.::: : .. :::.::::::.: :: ::::..:.
NP_001 LWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHP
270 280 290 300 310 320
300
pF1KB5 QKMRFTY
. :..
NP_001 TERCFVF
330
>>XP_011518486 (OMIM: 608342) PREDICTED: NADH-cytochrome (336 aa)
initn: 1179 init1: 1179 opt: 1214 Z-score: 1442.0 bits: 275.0 E(85289): 1.4e-73
Smith-Waterman score: 1214; 56.4% identity (82.0% similar) in 305 aa overlap (1-305:34-336)
10 20 30
pF1KB5 MGIQTSPVLLASLGVGLVTLLGLAVGSYLV
.: . .: :: .. : ::.: :.. :.
XP_011 RRSARSTRLQLGDAPASAPPRKHPPRTRPRVGAHEDPSLLLTITVTGVTVLVLVLKSMNS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 RRSRRPQVTLLDPNEKYLLRLLDKTTVSHNTKRFRFALPTAHHTLGLPVGKHIYLSTRID
:: :.: .:: ::. :: : :..: .::::.::::.::. :.::::::... : ..::
XP_011 RR-REP-ITLQDPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKID
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB5 GSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKVGDVVEFRGPS
. ::.: ::::.::.:.:.:::.::.:.:.:::..::::::.:::...:.:... ::::
XP_011 NELVVRAYTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPR
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB5 GLLTYTGKGHFNIQPNKKSPPEPRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFL
: : : : :...:.:.. : :. .: .:::::::::::::::::: : : : : :. :
XP_011 GRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB5 LFANQTEKDIILREDLEELQARYPNRFKLWFTLDHPPKDWAYSKGFVTADMIREHLPAPG
.::::::.::..:..:::. .:..:.::.:::.:: : ::.::::::::.:::: :.
XP_011 IFANQTEEDILVRKELEEIARTHPDQFNLWYTLDRPPIGWKYSSGFVTADMIKEHLPPPA
250 260 270 280 290 300
280 290 300
pF1KB5 DDVLVLLCGPPPMVQLACHPNLDKLGYSQKMRFTY
..:.:.:::::..: : ::::.::::.: : :::
XP_011 KSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIFTY
310 320 330
>>XP_016873409 (OMIM: 608342) PREDICTED: NADH-cytochrome (336 aa)
initn: 1179 init1: 1179 opt: 1214 Z-score: 1442.0 bits: 275.0 E(85289): 1.4e-73
Smith-Waterman score: 1214; 56.4% identity (82.0% similar) in 305 aa overlap (1-305:34-336)
10 20 30
pF1KB5 MGIQTSPVLLASLGVGLVTLLGLAVGSYLV
.: . .: :: .. : ::.: :.. :.
XP_016 RRSARSTRLQLGDAPASAPPRKHPPRTRPRVGAHEDPSLLLTITVTGVTVLVLVLKSMNS
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB5 RRSRRPQVTLLDPNEKYLLRLLDKTTVSHNTKRFRFALPTAHHTLGLPVGKHIYLSTRID
:: :.: .:: ::. :: : :..: .::::.::::.::. :.::::::... : ..::
XP_016 RR-REP-ITLQDPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKID
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB5 GSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKVGDVVEFRGPS
. ::.: ::::.::.:.:.:::.::.:.:.:::..::::::.:::...:.:... ::::
XP_016 NELVVRAYTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPR
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB5 GLLTYTGKGHFNIQPNKKSPPEPRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFL
: : : : :...:.:.. : :. .: .:::::::::::::::::: : : : : :. :
XP_016 GRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB5 LFANQTEKDIILREDLEELQARYPNRFKLWFTLDHPPKDWAYSKGFVTADMIREHLPAPG
.::::::.::..:..:::. .:..:.::.:::.:: : ::.::::::::.:::: :.
XP_016 IFANQTEEDILVRKELEEIARTHPDQFNLWYTLDRPPIGWKYSSGFVTADMIKEHLPPPA
250 260 270 280 290 300
280 290 300
pF1KB5 DDVLVLLCGPPPMVQLACHPNLDKLGYSQKMRFTY
..:.:.:::::..: : ::::.::::.: : :::
XP_016 KSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIFTY
310 320 330
>>NP_057313 (OMIM: 608342) NADH-cytochrome b5 reductase (276 aa)
initn: 1179 init1: 1179 opt: 1179 Z-score: 1401.7 bits: 267.3 E(85289): 2.5e-71
Smith-Waterman score: 1179; 58.8% identity (83.8% similar) in 272 aa overlap (34-305:5-276)
10 20 30 40 50 60
pF1KB5 QTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHNTKR
:: .:: ::. :: : :..: .::::.:
NP_057 MNSRRREPITLQDPEAKYPLPLIEKEKISHNTRR
10 20 30
70 80 90 100 110 120
pF1KB5 FRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHP
:::.::. :.::::::... : ..::. ::.: ::::.::.:.:.:::.::.:.:.:::
NP_057 FRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRAYTPVSSDDDRGFVDLIIKIYFKNVHP
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 KFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLGMIA
..::::::.:::...:.:... :::: : : : : :...:.:.. : :. .: .:::::
NP_057 QYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 GGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLWFTL
::::::::::::: : : : : :. :.::::::.::..:..:::. .:..:.::.::
NP_057 GGTGITPMLQLIRHITKDPSDRTRMSLIFANQTEEDILVRKELEEIARTHPDQFNLWYTL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 DHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQKMRF
:.:: : ::.::::::::.:::: :. ..:.:.:::::..: : ::::.::::.: : :
NP_057 DRPPIGWKYSSGFVTADMIKEHLPPPAKSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIF
220 230 240 250 260 270
pF1KB5 TY
::
NP_057 TY
>>NP_001289755 (OMIM: 608342) NADH-cytochrome b5 reducta (276 aa)
initn: 1179 init1: 1179 opt: 1179 Z-score: 1401.7 bits: 267.3 E(85289): 2.5e-71
Smith-Waterman score: 1179; 58.8% identity (83.8% similar) in 272 aa overlap (34-305:5-276)
10 20 30 40 50 60
pF1KB5 QTSPVLLASLGVGLVTLLGLAVGSYLVRRSRRPQVTLLDPNEKYLLRLLDKTTVSHNTKR
:: .:: ::. :: : :..: .::::.:
NP_001 MNSRRREPITLQDPEAKYPLPLIEKEKISHNTRR
10 20 30
70 80 90 100 110 120
pF1KB5 FRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHP
:::.::. :.::::::... : ..::. ::.: ::::.::.:.:.:::.::.:.:.:::
NP_001 FRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRAYTPVSSDDDRGFVDLIIKIYFKNVHP
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 KFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLGMIA
..::::::.:::...:.:... :::: : : : : :...:.:.. : :. .: .:::::
NP_001 QYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 GGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLWFTL
::::::::::::: : : : : :. :.::::::.::..:..:::. .:..:.::.::
NP_001 GGTGITPMLQLIRHITKDPSDRTRMSLIFANQTEEDILVRKELEEIARTHPDQFNLWYTL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 DHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLLCGPPPMVQLACHPNLDKLGYSQKMRF
:.:: : ::.::::::::.:::: :. ..:.:.:::::..: : ::::.::::.: : :
NP_001 DRPPIGWKYSSGFVTADMIKEHLPPPAKSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIF
220 230 240 250 260 270
pF1KB5 TY
::
NP_001 TY
305 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:32:14 2016 done: Sat Nov 5 12:32:15 2016
Total Scan time: 7.110 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]