Result of FASTA (omim) for
pF1KB5361
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5361, 429 aa
1>>>pF1KB5361 429 - 429 aa - 429 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.8273+/-0.000427; mu= -2.1876+/- 0.027
mean_var=286.8690+/-58.062, 0's: 0 Z-trim(119.5): 151 B-trim: 0 in 0/58
Lambda= 0.075724
statistics sampled from 33492 (33645) to 33492 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.394), width: 16
Scan time: 8.710
The best scores are: opt bits E(85289)
NP_073570 (OMIM: 616916) stromal membrane-associat ( 429) 2926 333.1 8.7e-91
NP_001185907 (OMIM: 616916) stromal membrane-assoc ( 399) 2707 309.1 1.3e-83
XP_011540262 (OMIM: 616916) PREDICTED: stromal mem ( 403) 2696 307.9 3e-83
NP_001185908 (OMIM: 616916) stromal membrane-assoc ( 424) 2693 307.6 3.9e-83
NP_001185909 (OMIM: 616916) stromal membrane-assoc ( 349) 2360 271.1 3.1e-72
XP_016857582 (OMIM: 616916) PREDICTED: stromal mem ( 267) 1803 210.2 5.2e-54
NP_068759 (OMIM: 611372) stromal membrane-associat ( 440) 1296 155.0 3.6e-37
XP_011534349 (OMIM: 611372) PREDICTED: stromal mem ( 429) 1185 142.9 1.6e-33
NP_001268368 (OMIM: 611372) stromal membrane-assoc ( 436) 1185 142.9 1.6e-33
XP_011534347 (OMIM: 611372) PREDICTED: stromal mem ( 456) 758 96.2 1.8e-19
NP_001037770 (OMIM: 611372) stromal membrane-assoc ( 467) 758 96.2 1.8e-19
XP_005248817 (OMIM: 611372) PREDICTED: stromal mem ( 250) 691 88.7 1.8e-17
XP_011534348 (OMIM: 611372) PREDICTED: stromal mem ( 440) 654 84.9 4.6e-16
NP_001268369 (OMIM: 611372) stromal membrane-assoc ( 457) 643 83.7 1.1e-15
NP_060874 (OMIM: 608635) arf-GAP with dual PH doma ( 381) 333 49.7 1.5e-05
XP_011510908 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 339 50.6 1.6e-05
XP_011510906 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 339 50.6 1.6e-05
XP_011510907 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 339 50.6 1.6e-05
NP_036419 (OMIM: 607766) arf-GAP with coiled-coil, ( 778) 339 50.7 1.6e-05
XP_006713620 (OMIM: 607766) PREDICTED: arf-GAP wit ( 785) 339 50.7 1.6e-05
XP_016861538 (OMIM: 607766) PREDICTED: arf-GAP wit ( 806) 339 50.7 1.7e-05
XP_011510905 (OMIM: 607766) PREDICTED: arf-GAP wit ( 813) 339 50.7 1.7e-05
XP_016861537 (OMIM: 607766) PREDICTED: arf-GAP wit ( 813) 339 50.7 1.7e-05
NP_055531 (OMIM: 607763) arf-GAP with coiled-coil, ( 740) 338 50.5 1.7e-05
XP_011510904 (OMIM: 607766) PREDICTED: arf-GAP wit ( 820) 339 50.7 1.7e-05
XP_016861536 (OMIM: 607766) PREDICTED: arf-GAP wit ( 841) 339 50.7 1.7e-05
NP_006860 (OMIM: 608114) arf-GAP with dual PH doma ( 374) 331 49.5 1.7e-05
XP_016861535 (OMIM: 607766) PREDICTED: arf-GAP wit ( 848) 339 50.7 1.7e-05
XP_016867224 (OMIM: 616813) PREDICTED: arf-GAP wit ( 462) 323 48.7 3.7e-05
XP_016867222 (OMIM: 616813) PREDICTED: arf-GAP wit ( 527) 323 48.8 4e-05
XP_005250000 (OMIM: 616813) PREDICTED: arf-GAP wit ( 565) 323 48.8 4.3e-05
NP_001268229 (OMIM: 616813) arf-GAP with GTPase, A ( 580) 323 48.8 4.3e-05
XP_016867223 (OMIM: 616813) PREDICTED: arf-GAP wit ( 580) 323 48.8 4.3e-05
XP_016867221 (OMIM: 616813) PREDICTED: arf-GAP wit ( 630) 323 48.8 4.6e-05
XP_011514082 (OMIM: 616813) PREDICTED: arf-GAP wit ( 683) 323 48.9 4.9e-05
NP_055729 (OMIM: 608651) arf-GAP with GTPase, ANK ( 804) 322 48.8 6e-05
XP_005246116 (OMIM: 608651) PREDICTED: arf-GAP wit ( 808) 322 48.8 6e-05
NP_114152 (OMIM: 616813) arf-GAP with GTPase, ANK ( 911) 323 49.0 6.1e-05
NP_001032208 (OMIM: 608651) arf-GAP with GTPase, A ( 857) 322 48.8 6.3e-05
XP_006712298 (OMIM: 608651) PREDICTED: arf-GAP wit ( 882) 322 48.8 6.4e-05
XP_006712297 (OMIM: 608651) PREDICTED: arf-GAP wit ( 886) 322 48.8 6.4e-05
XP_011508851 (OMIM: 608651) PREDICTED: arf-GAP wit (1073) 322 48.9 7.4e-05
XP_011508850 (OMIM: 608651) PREDICTED: arf-GAP wit (1098) 322 48.9 7.5e-05
XP_016858771 (OMIM: 608651) PREDICTED: arf-GAP wit (1106) 322 48.9 7.6e-05
XP_011508849 (OMIM: 608651) PREDICTED: arf-GAP wit (1126) 322 48.9 7.7e-05
XP_006712300 (OMIM: 608651) PREDICTED: arf-GAP wit (1147) 322 48.9 7.8e-05
XP_006712302 (OMIM: 608651) PREDICTED: arf-GAP wit (1151) 322 48.9 7.8e-05
XP_011534350 (OMIM: 611372) PREDICTED: stromal mem ( 382) 310 47.2 8.5e-05
XP_016866659 (OMIM: 611372) PREDICTED: stromal mem ( 382) 310 47.2 8.5e-05
XP_016873902 (OMIM: 606908) PREDICTED: ADP-ribosyl ( 535) 311 47.5 0.0001
>>NP_073570 (OMIM: 616916) stromal membrane-associated p (429 aa)
initn: 2926 init1: 2926 opt: 2926 Z-score: 1750.9 bits: 333.1 E(85289): 8.7e-91
Smith-Waterman score: 2926; 100.0% identity (100.0% similar) in 429 aa overlap (1-429:1-429)
10 20 30 40 50 60
pF1KB5 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 HISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 HISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 KKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 KKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 TAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 VPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 VPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 PGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 GYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAAN
370 380 390 400 410 420
pF1KB5 QTLSPQMWK
:::::::::
NP_073 QTLSPQMWK
>>NP_001185907 (OMIM: 616916) stromal membrane-associate (399 aa)
initn: 2707 init1: 2707 opt: 2707 Z-score: 1622.1 bits: 309.1 E(85289): 1.3e-83
Smith-Waterman score: 2707; 100.0% identity (100.0% similar) in 396 aa overlap (34-429:4-399)
10 20 30 40 50 60
pF1KB5 KSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHIS
::::::::::::::::::::::::::::::
NP_001 MIFKGPRWASWNIGVFICIRCAGIHRNLGVHIS
10 20 30
70 80 90 100 110 120
pF1KB5 RVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 MDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAP
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 VMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGV
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 TPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYM
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 AGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTL
340 350 360 370 380 390
pF1KB5 SPQMWK
::::::
NP_001 SPQMWK
>>XP_011540262 (OMIM: 616916) PREDICTED: stromal membran (403 aa)
initn: 2696 init1: 2696 opt: 2696 Z-score: 1615.5 bits: 307.9 E(85289): 3e-83
Smith-Waterman score: 2696; 99.7% identity (99.7% similar) in 396 aa overlap (34-429:8-403)
10 20 30 40 50 60
pF1KB5 KSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHIS
: ::::::::::::::::::::::::::::
XP_011 MRKLRLRKWPRWASWNIGVFICIRCAGIHRNLGVHIS
10 20 30
70 80 90 100 110 120
pF1KB5 RVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB5 MDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAP
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB5 VMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPE
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB5 NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGV
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB5 TPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYM
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB5 AGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTL
340 350 360 370 380 390
pF1KB5 SPQMWK
::::::
XP_011 SPQMWK
400
>>NP_001185908 (OMIM: 616916) stromal membrane-associate (424 aa)
initn: 2693 init1: 2693 opt: 2693 Z-score: 1613.4 bits: 307.6 E(85289): 3.9e-83
Smith-Waterman score: 2693; 100.0% identity (100.0% similar) in 394 aa overlap (36-429:31-424)
10 20 30 40 50 60
pF1KB5 VKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRV
::::::::::::::::::::::::::::::
NP_001 MGKVGRARFAQKDVLQIEEIGPVKLFVRDWPRWASWNIGVFICIRCAGIHRNLGVHISRV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 KSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 RSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 DLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 NLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 MAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSP
370 380 390 400 410 420
pF1KB5 QMWK
::::
NP_001 QMWK
>>NP_001185909 (OMIM: 616916) stromal membrane-associate (349 aa)
initn: 2360 init1: 2360 opt: 2360 Z-score: 1418.0 bits: 271.1 E(85289): 3.1e-72
Smith-Waterman score: 2360; 100.0% identity (100.0% similar) in 349 aa overlap (81-429:1-349)
60 70 80 90 100 110
pF1KB5 CAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAV
::::::::::::::::::::::::::::::
NP_001 MQEMGNGKANRLYEAYLPETFRRPQIDPAV
10 20 30
120 130 140 150 160 170
pF1KB5 EGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDP
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB5 QLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVG
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB5 SMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQ
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB5 MAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGV
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB5 PNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQS
280 290 300 310 320 330
420
pF1KB5 MSGGNGQAANQTLSPQMWK
:::::::::::::::::::
NP_001 MSGGNGQAANQTLSPQMWK
340
>>XP_016857582 (OMIM: 616916) PREDICTED: stromal membran (267 aa)
initn: 1803 init1: 1803 opt: 1803 Z-score: 1090.6 bits: 210.2 E(85289): 5.2e-54
Smith-Waterman score: 1803; 100.0% identity (100.0% similar) in 267 aa overlap (163-429:1-267)
140 150 160 170 180 190
pF1KB5 FRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDA
::::::::::::::::::::::::::::::
XP_016 MPQKKEDPQLPRKSSPKSTAPVMDLLGLDA
10 20 30
200 210 220 230 240 250
pF1KB5 PVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPG
40 50 60 70 80 90
260 270 280 290 300 310
pF1KB5 SKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGS
100 110 120 130 140 150
320 330 340 350 360 370
pF1KB5 MMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQT
160 170 180 190 200 210
380 390 400 410 420
pF1KB5 VYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK
220 230 240 250 260
>>NP_068759 (OMIM: 611372) stromal membrane-associated p (440 aa)
initn: 1147 init1: 734 opt: 1296 Z-score: 788.4 bits: 155.0 E(85289): 3.6e-37
Smith-Waterman score: 1297; 50.1% identity (73.3% similar) in 445 aa overlap (4-429:9-440)
10 20 30 40 50
pF1KB5 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH
:. : ...: .:..:: :::::.::::..::::::::::::::::::::::
NP_068 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR
::::::::::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::
NP_068 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 DKYEKKKYMDRS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPR
::::::::.:.. . :. .::: . :. : ::: .:.. ::. :::.. :.
NP_068 DKYEKKKYYDKNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQQLEPK
130 140 150 160 170
180 190 200 210 220
pF1KB5 KS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS-GSRK
:: :::..: :..::::::.:.. ..:..:. :. :::. . : : :.. .
NP_068 KSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 VVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMPTQAMF
. : :.:.. ..: .:.:: : .::::..::::::::::::::. : :. : ..:
NP_068 GTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVF
240 250 260 270 280 290
290 300 310 320 330
pF1KB5 MAPAQMAY----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGY
:.:... . :.:. .:: :: : . : .: : . : ::. : :: :.
NP_068 MGPTNIPFTSQAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MPMPNGF
300 310 320 330 340
340 350 360 370 380 390
pF1KB5 MGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFY
::. :...: .:.... : : :.:. . ::. .:. ::: ::.:.::.::::::..
NP_068 MGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSIS
350 360 370 380 390 400
400 410 420
pF1KB5 GANGMMNYGQSMS---GGNGQAANQTLSPQMWK
.:. ..:: : : .:....:::: :.::
NP_068 SATPTAGFGQPSSTTAGWSGSSSGQTLSTQLWK
410 420 430 440
>>XP_011534349 (OMIM: 611372) PREDICTED: stromal membran (429 aa)
initn: 1032 init1: 734 opt: 1185 Z-score: 723.0 bits: 142.9 E(85289): 1.6e-33
Smith-Waterman score: 1186; 50.4% identity (73.1% similar) in 405 aa overlap (4-392:9-400)
10 20 30 40 50
pF1KB5 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH
:. : ...: .:..:: :::::.::::..::::::::::::::::::::::
XP_011 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR
::::::::::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::
XP_011 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 DKYEKKKYMDRS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPR
::::::::.:.. . :. .::: . :. : ::: .:.. ::. :::.. :.
XP_011 DKYEKKKYYDKNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQQLEPK
130 140 150 160 170
180 190 200 210 220
pF1KB5 KS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS-GSRK
:: :::..: :..::::::.:.. ..:..:. :. :::. . : : :.. .
XP_011 KSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 VVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMPTQAMF
. : :.:.. ..: .:.:: : .::::..::::::::::::::. : :. : ..:
XP_011 GTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVF
240 250 260 270 280 290
290 300 310 320 330
pF1KB5 MAPAQMAY----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGY
:.:... . :.:. .:: :: : . : .: : . : ::. : :: :.
XP_011 MGPTNIPFTSQAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MPMPNGF
300 310 320 330 340
340 350 360 370 380 390
pF1KB5 MGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFY
::. :...: .:.... : : :.:. . ::. .:. ::: ::.:.:. :.
XP_011 MGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQIMQKGDAVLQH
350 360 370 380 390 400
400 410 420
pF1KB5 GANGMMNYGQSMSGGNGQAANQTLSPQMWK
XP_011 SISAIYWPMTRWLKCPLVGMKT
410 420
>>NP_001268368 (OMIM: 611372) stromal membrane-associate (436 aa)
initn: 1032 init1: 734 opt: 1185 Z-score: 722.9 bits: 142.9 E(85289): 1.6e-33
Smith-Waterman score: 1186; 50.4% identity (73.1% similar) in 405 aa overlap (4-392:9-400)
10 20 30 40 50
pF1KB5 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH
:. : ...: .:..:: :::::.::::..::::::::::::::::::::::
NP_001 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR
::::::::::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::
NP_001 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB5 DKYEKKKYMDRS-LDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPR
::::::::.:.. . :. .::: . :. : ::: .:.. ::. :::.. :.
NP_001 DKYEKKKYYDKNAIAITNKEKEKKKEEKK-REKEPEKPAKPLTAEKL---QKKDQQLEPK
130 140 150 160 170
180 190 200 210 220
pF1KB5 KS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-NTLEKDLDL---LASVPSPSSS-GSRK
:: :::..: :..::::::.:.. ..:..:. :. :::. . : : :.. .
NP_001 KSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB5 VVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQT-PQMPTQAMF
. : :.:.. ..: .:.:: : .::::..::::::::::::::. : :. : ..:
NP_001 GTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVF
240 250 260 270 280 290
290 300 310 320 330
pF1KB5 MAPAQMAY----PTAYPSFP--GVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGY
:.:... . :.:. .:: :: : . : .: : . : ::. : :: :.
NP_001 MGPTNIPFTSQAPAAFQGFPSMGVPVPAA------PGLIGNVMGQSPSMMVG-MPMPNGF
300 310 320 330 340
340 350 360 370 380 390
pF1KB5 MGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFY
::. :...: .:.... : : :.:. . ::. .:. ::: ::.:.:. :.
NP_001 MGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSKFGLPQAQQPQWSLSQIMQKGDAVLQH
350 360 370 380 390 400
400 410 420
pF1KB5 GANGMMNYGQSMSGGNGQAANQTLSPQMWK
NP_001 SISAIYWPMTRWLKCPLVDESADGWHEYQ
410 420 430
>>XP_011534347 (OMIM: 611372) PREDICTED: stromal membran (456 aa)
initn: 1073 init1: 674 opt: 758 Z-score: 470.6 bits: 96.2 E(85289): 1.8e-19
Smith-Waterman score: 1150; 47.6% identity (69.1% similar) in 431 aa overlap (4-392:9-427)
10 20 30 40 50
pF1KB5 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH
:. : ...: .:..:: :::::.::::..::::::::::::::::::::::
XP_011 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB5 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR
::::::::::::::::::: :::::::.::: :: :::: :::.::::: : ::: :::
XP_011 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
70 80 90 100 110 120
120 130 140
pF1KB5 DKYEKKKYMDRS--------------------------LDINAFRKEKDDKWK-RGSEPV
::::::::.:.. .: : ..:::. : . . :
XP_011 DKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVDKNKLEKEKEKKKEEKKREKE
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB5 PEKKLEPVVFEKVKMPQKKEDPQLPRKS-SPKSTA-PVMDLLGLDAPVACSIANSKTS-N
::: .:.. ::. :::.. :.:: :::..: :..::::::.:.. ..:..:.
XP_011 PEKPAKPLTAEKL---QKKDQQLEPKKSTSPKKAAEPTVDLLGLDGPAVAPVTNGNTTVP
190 200 210 220 230
210 220 230 240 250 260
pF1KB5 TLEKDLDL---LASVPSPSSS-GSRKVVGSMPTAGSAGSVPE-NLNLFPEPGSKSEEIGK
:. :::. . : : :.. . . : :.:.. ..: .:.:: : .::::..:
XP_011 PLNDDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLSTVTSGDLDLFTEQTTKSEEVAK
240 250 260 270 280 290
270 280 290 300 310
pF1KB5 KQLSKDSILSLYGSQT-PQMPTQAMFMAPAQMAY----PTAYPSFP--GVTPPNSIMGSM
:::::::::::::. : :. : ..::.:... . :.:. .:: :: : .
XP_011 KQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQAPAAFQGFPSMGVPVPAA-----
300 310 320 330 340 350
320 330 340 350 360 370
pF1KB5 MPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTV
: .: : . : ::. : :: :.::. :...: .:.... : : :.:. . ::.
XP_011 -PGLIGNVMGQSPSMMVG-MPMPNGFMGNAQTGVMPLPQNVVGPQ--GGMVGQMGAPQSK
360 370 380 390 400
380 390 400 410 420
pF1KB5 YGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK
.:. ::: ::.:.:. :.
XP_011 FGLPQAQQPQWSLSQIMQKGDAVLQHSISAIYWPMTRWLKCPLVGMKT
410 420 430 440 450
429 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:30:36 2016 done: Sat Nov 5 12:30:38 2016
Total Scan time: 8.710 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]